PDB Chemical Component EDN
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for EDN
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| NAA |
CAB |
1.467 |
1.469 |
| CAB |
CAC |
1.508 |
1.530 |
| CAC |
NAD |
1.464 |
1.469 |
| NAA |
HAA1 |
1.000 |
1.009 |
| NAA |
HAA2 |
1.000 |
1.009 |
| CAB |
HAB1 |
1.100 |
1.090 |
| CAB |
HAB2 |
1.100 |
1.090 |
| CAC |
HAC1 |
1.100 |
1.090 |
| CAC |
HAC2 |
1.100 |
1.090 |
| NAD |
HAD1 |
1.000 |
1.009 |
| NAD |
HAD2 |
1.000 |
1.009 |
Bond Angles for EDN
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| NAA |
CAB |
CAC |
106.7 |
109.4 |
| CAB |
NAA |
HAA1 |
109.5 |
111.0 |
| CAB |
NAA |
HAA2 |
109.5 |
111.0 |
| NAA |
CAB |
HAB1 |
110.4 |
109.5 |
| NAA |
CAB |
HAB2 |
111.0 |
109.5 |
| CAB |
CAC |
NAD |
107.3 |
109.4 |
| CAC |
CAB |
HAB1 |
110.4 |
109.5 |
| CAC |
CAB |
HAB2 |
111.1 |
109.5 |
| CAB |
CAC |
HAC1 |
110.2 |
109.5 |
| CAB |
CAC |
HAC2 |
110.7 |
109.5 |
| NAD |
CAC |
HAC1 |
110.2 |
109.5 |
| NAD |
CAC |
HAC2 |
110.7 |
109.5 |
| CAC |
NAD |
HAD1 |
109.5 |
111.0 |
| CAC |
NAD |
HAD2 |
109.4 |
111.0 |
| HAA1 |
NAA |
HAA2 |
109.5 |
111.0 |
| HAB1 |
CAB |
HAB2 |
107.3 |
109.5 |
| HAC1 |
CAC |
HAC2 |
107.8 |
109.5 |
| HAD1 |
NAD |
HAD2 |
109.5 |
111.0 |
Torsion Angles for EDN
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| NAA |
CAB |
CAC |
NAD |
0.1 |
180.0 |
| CAC |
CAB |
NAA |
HAB1 |
240.0 |
240.0 |
| CAC |
CAB |
NAA |
HAB2 |
121.1 |
120.0 |
| NAA |
CAB |
CAC |
HAC1 |
120.1 |
300.0 |
| NAA |
CAB |
CAC |
HAC2 |
239.2 |
60.0 |
| HAA1 |
NAA |
CAB |
HAA2 |
240.0 |
236.0 |
| HAB1 |
CAB |
NAA |
HAB2 |
241.1 |
240.0 |
| CAC |
CAB |
NAA |
HAA1 |
151.8 |
180.0 |
| CAC |
CAB |
NAA |
HAA2 |
271.8 |
304.0 |
| NAA |
CAB |
CAC |
HAB1 |
120.0 |
120.0 |
| NAA |
CAB |
CAC |
HAB2 |
238.9 |
240.0 |
| NAD |
CAC |
CAB |
HAC1 |
240.0 |
240.0 |
| NAD |
CAC |
CAB |
HAC2 |
120.8 |
120.0 |
| CAB |
CAC |
NAD |
HAD1 |
348.0 |
180.0 |
| CAB |
CAC |
NAD |
HAD2 |
108.0 |
304.0 |
| HAB1 |
CAB |
CAC |
HAB2 |
118.9 |
120.0 |
| HAC1 |
CAC |
CAB |
HAC2 |
240.8 |
240.0 |
| NAD |
CAC |
CAB |
HAB1 |
240.1 |
60.0 |
| NAD |
CAC |
CAB |
HAB2 |
121.1 |
300.0 |
| CAB |
CAC |
NAD |
HAC1 |
120.0 |
120.0 |
| CAB |
CAC |
NAD |
HAC2 |
239.2 |
240.0 |
| HAC1 |
CAC |
NAD |
HAC2 |
119.2 |
120.0 |
| HAD1 |
NAD |
CAC |
HAD2 |
240.0 |
236.0 |
| HAA1 |
NAA |
CAB |
CAC |
151.8 |
180.0 |
| CAB |
NAA |
HAA1 |
HAA2 |
120.0 |
124.0 |
| HAA1 |
NAA |
CAB |
HAB1 |
271.8 |
300.0 |
| HAA1 |
NAA |
CAB |
HAB2 |
30.7 |
60.0 |
| HAA2 |
NAA |
CAB |
CAC |
271.8 |
304.0 |
| CAB |
NAA |
HAA2 |
HAA1 |
239.9 |
236.0 |
| HAA2 |
NAA |
CAB |
HAB1 |
31.8 |
64.0 |
| HAA2 |
NAA |
CAB |
HAB2 |
150.7 |
184.0 |
| NAA |
CAB |
HAB1 |
CAC |
242.3 |
240.0 |
| HAB1 |
CAB |
NAA |
HAA1 |
271.8 |
300.0 |
| HAB1 |
CAB |
NAA |
HAA2 |
31.8 |
64.0 |
| NAA |
CAB |
HAB1 |
HAB2 |
121.1 |
120.0 |
| HAB1 |
CAB |
CAC |
NAD |
240.1 |
60.0 |
| CAC |
CAB |
HAB1 |
HAB2 |
238.8 |
239.9 |
| HAB1 |
CAB |
CAC |
HAC1 |
0.1 |
180.0 |
| HAB1 |
CAB |
CAC |
HAC2 |
119.3 |
300.0 |
| NAA |
CAB |
HAB2 |
CAC |
118.5 |
120.0 |
| HAB2 |
CAB |
NAA |
HAA1 |
30.7 |
60.0 |
| HAB2 |
CAB |
NAA |
HAA2 |
150.7 |
184.0 |
| NAA |
CAB |
HAB2 |
HAB1 |
239.3 |
240.0 |
| HAB2 |
CAB |
CAC |
NAD |
121.1 |
300.0 |
| CAC |
CAB |
HAB2 |
HAB1 |
120.8 |
120.1 |
| HAB2 |
CAB |
CAC |
HAC1 |
241.1 |
60.0 |
| HAB2 |
CAB |
CAC |
HAC2 |
0.3 |
180.0 |
| CAB |
CAC |
HAC1 |
NAD |
241.8 |
240.0 |
| HAC1 |
CAC |
CAB |
HAB1 |
0.1 |
180.0 |
| HAC1 |
CAC |
CAB |
HAB2 |
241.1 |
60.0 |
| CAB |
CAC |
HAC1 |
HAC2 |
120.9 |
120.1 |
| NAD |
CAC |
HAC1 |
HAC2 |
239.1 |
240.0 |
| HAC1 |
CAC |
NAD |
HAD1 |
228.0 |
60.0 |
| HAC1 |
CAC |
NAD |
HAD2 |
348.0 |
184.0 |
| CAB |
CAC |
HAC2 |
NAD |
118.8 |
120.0 |
| HAC2 |
CAC |
CAB |
HAB1 |
119.3 |
300.0 |
| HAC2 |
CAC |
CAB |
HAB2 |
0.3 |
180.0 |
| CAB |
CAC |
HAC2 |
HAC1 |
239.4 |
239.9 |
| NAD |
CAC |
HAC2 |
HAC1 |
120.6 |
120.0 |
| HAC2 |
CAC |
NAD |
HAD1 |
108.8 |
300.0 |
| HAC2 |
CAC |
NAD |
HAD2 |
228.8 |
64.0 |
| HAD1 |
NAD |
CAC |
HAC1 |
228.0 |
60.0 |
| HAD1 |
NAD |
CAC |
HAC2 |
108.8 |
300.0 |
| CAC |
NAD |
HAD1 |
HAD2 |
120.0 |
124.0 |
| HAD2 |
NAD |
CAC |
HAC1 |
348.0 |
184.0 |
| HAD2 |
NAD |
CAC |
HAC2 |
228.8 |
64.0 |
| CAC |
NAD |
HAD2 |
HAD1 |
240.0 |
236.0 |