PDB Chemical Component ED5

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for ED5

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
CBE OAG 1.229 1.215
NBL CBE 1.268 1.348
OBD CBE 1.435 1.347
OBD CBP 1.424 1.452
CAE CBP 1.522 1.530
CBP CAC 1.521 1.530
CBP CAD 1.511 1.530
CAC HAC 1.101 1.090
CAC HACA 1.101 1.090
CAC HACB 1.100 1.089
CAD HAD 1.100 1.090
CAD HADA 1.100 1.089
CAD HADB 1.100 1.090
CAE HAE 1.100 1.089
CAE HAEA 1.100 1.090
CAE HAEB 1.100 1.089
CAW NBL 1.463 1.469
NBL CAX 1.452 1.469
CAV CAX 1.516 1.532
CAX HAX 1.100 1.090
CAX HAXA 1.100 1.090
CBK CAV 1.522 1.531
CAV HAV 1.100 1.089
CAV HAVA 1.100 1.091
CAU CAW 1.535 1.532
CAW HAW 1.100 1.090
CAW HAWA 1.100 1.090
CAU CBK 1.536 1.534
CAU HAU 1.100 1.091
CAU HAUA 1.100 1.090
CBK CBB 1.524 1.530
CBK HBK 1.100 1.090
NBN CBB 1.476 1.466
CBB HBB 1.100 1.090
CBB HBBA 1.100 1.090
CAZ NBN 1.497 1.465
SBQ NBN 1.646 1.656
OAI SBQ 1.490 1.421
SBQ CBJ 1.624 1.762
SBQ OAH 1.487 1.421
CBF CBJ 1.391 1.383
CBJ CAN 1.397 1.383
CAN CAL 1.391 1.382
CAN HAN 1.080 1.080
CAK CAL 1.387 1.382
CAL HAL 1.080 1.080
CAM CAK 1.389 1.382
CAK HAK 1.080 1.080
CBF CAM 1.389 1.382
CAM HAM 1.080 1.080
CAA CBF 1.499 1.507
CAA HAA 1.100 1.090
CAA HAAA 1.100 1.090
CAA HAAB 1.100 1.090
CAY CAZ 1.544 1.530
CAZ HAZ 1.100 1.090
CAZ HAZA 1.100 1.090
NBM CAY 1.479 1.465
CAY HAY 1.100 1.090
CAY HAYA 1.100 1.090
CBA NBM 1.433 1.465
CBH NBM 1.412 1.392
CAQ CBH 1.396 1.392
CBH CAR 1.396 1.392
CAO CAQ 1.393 1.376
CAQ HAQ 1.079 1.079
CAO CBG 1.396 1.399
CAO HAO 1.080 1.080
CAP CAR 1.389 1.377
CAR HAR 1.080 1.080
CBG CAP 1.389 1.398
CAP HAP 1.080 1.079
CAJ CBG 1.290 1.432
NAF CAJ 1.166 1.136
CBI CBA 1.498 1.507
CBA HBA 1.100 1.089
CBA HBAA 1.100 1.090
NBO CBI 1.337 1.368
CAS CBI 1.384 1.347
NBC CAS 1.356 1.342
CAS HAS 1.080 1.079
CAT NBC 1.365 1.305
CAT NBO 1.344 1.350
CAT HAT 1.080 1.080
NBO CAB 1.486 1.465
CAB HAB 1.100 1.090
CAB HABA 1.100 1.090
CAB HABB 1.100 1.090

Bond Angles for ED5

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
OBD CBP CAC 112.9 109.5
OBD CBP CAD 107.3 109.5
CAC CBP CAD 107.9 109.5
CBP CAC HAC 109.5 109.4
CBP CAC HACA 109.5 109.4
CBP CAC HACB 109.5 109.5
CBP CAD HAD 109.5 109.5
CBP CAD HADA 109.5 109.5
CBP CAD HADB 109.4 109.5
HAC CAC HACA 109.5 109.5
HAC CAC HACB 109.5 109.5
HACA CAC HACB 109.5 109.5
HAD CAD HADA 109.5 109.5
HAD CAD HADB 109.4 109.4
HADA CAD HADB 109.5 109.5
HAE CAE HAEA 109.4 109.5
HAE CAE HAEB 109.5 109.5
HAEA CAE HAEB 109.5 109.5
NBL CAX HAX 110.5 109.6
NBL CAX HAXA 111.1 109.6
CAV CAX HAX 110.5 109.6
CAV CAX HAXA 111.1 109.7
HAX CAX HAXA 107.2 109.6
CBK CAV HAV 108.1 109.5
CBK CAV HAVA 107.1 109.5
HAV CAV HAVA 112.9 109.5
CAU CAW HAW 111.6 109.6
CAU CAW HAWA 112.9 109.7
HAW CAW HAWA 104.8 109.6
CBK CAU HAU 108.6 109.6
CBK CAU HAUA 108.0 109.4
CAU CBK CBB 111.3 109.5
CAU CBK HBK 104.8 109.5
HAU CAU HAUA 111.5 109.5
CBB CBK HBK 113.8 109.4
CBK CBB HBB 106.6 109.5
CBK CBB HBBA 104.5 109.5
NBN CBB HBB 106.6 109.5
NBN CBB HBBA 104.5 109.4
HBB CBB HBBA 116.8 109.5
OAI SBQ CBJ 110.7 106.4
OAI SBQ OAH 109.9 123.2
OAH SBQ CBJ 106.7 106.4
SBQ CBJ CAN 118.4 120.0
CBJ CAN CAL 121.1 120.0
CBJ CAN HAN 119.4 120.0
CAL CAN HAN 119.4 120.0
CAN CAL HAL 120.0 120.0
CAK CAL HAL 120.0 120.0
CAM CAK HAK 120.4 120.0
CBF CAM HAM 119.7 120.0
HAA CAA HAAA 109.5 109.4
HAA CAA HAAB 109.5 109.5
HAAA CAA HAAB 109.5 109.4
CAY CAZ HAZ 109.8 109.5
CAY CAZ HAZA 110.1 109.4
HAZ CAZ HAZA 108.7 109.5
NBM CAY HAY 109.4 109.5
NBM CAY HAYA 109.3 109.5
HAY CAY HAYA 109.7 109.5
CAQ CBH CAR 119.5 120.2
CBH CAR HAR 120.0 120.0
CAO CAQ HAQ 119.8 120.0
CBG CAO HAO 120.2 120.0
CAO CBG CAP 119.9 119.9
CAP CAR HAR 120.0 119.9
CBG CAP HAP 119.8 120.1
CBI CBA HBA 108.2 109.5
CBI CBA HBAA 107.4 109.5
HBA CBA HBAA 112.4 109.5
NBC CAS HAS 128.6 126.0
NBO CAT HAT 125.5 125.7
CAT NBO CAB 126.5 126.4
NBO CAB HAB 109.5 109.5
NBO CAB HABA 109.4 109.4
NBO CAB HABB 109.5 109.5
HAB CAB HABA 109.5 109.5
HAB CAB HABB 109.5 109.5
HABA CAB HABB 109.5 109.4

Torsion Angles for ED5

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
CAC CBP OBD CAD 241.3 240.0
OBD CBP CAC HAC 280.4 60.0
OBD CBP CAC HACA 40.5 180.0
OBD CBP CAC HACB 160.5 300.0
OBD CBP CAD HAD 213.9 60.0
OBD CBP CAD HADA 333.9 180.0
OBD CBP CAD HADB 93.9 300.0
CAE CBP CAC HAC 38.5 180.0
CAE CBP CAC HACA 158.5 300.0
CAE CBP CAC HACB 278.5 60.0
CAE CBP CAD HAD 96.3 300.0
CAE CBP CAD HADA 216.3 60.0
CAE CBP CAD HADB 336.3 180.0
OBD CBP CAC CAD 118.4 120.0
CAC CBP CAD HAD 335.7 180.0
CAC CBP CAD HADA 95.8 300.0
CAC CBP CAD HADB 215.8 60.0
HAC CAC CBP HACA 240.0 240.0
HAC CAC CBP HACB 120.0 120.0
HACA CAC CBP HACB 240.0 240.0
OBD CBP CAD CAC 238.1 240.0
CAD CBP CAC HAC 162.1 300.0
CAD CBP CAC HACA 282.1 60.0
CAD CBP CAC HACB 42.1 180.0
HAD CAD CBP HADA 240.0 239.9
HAD CAD CBP HADB 120.0 120.0
HADA CAD CBP HADB 240.0 240.0
HAC CAC CBP CAD 162.1 300.0
CBP CAC HAC HACA 120.0 119.9
CBP CAC HAC HACB 240.0 240.0
HACA CAC HAC HACB 120.0 120.0
HACA CAC CBP CAD 282.1 60.0
CBP CAC HACA HAC 240.0 240.1
CBP CAC HACA HACB 120.0 120.1
HAC CAC HACA HACB 240.0 240.0
HACB CAC CBP CAD 42.1 180.0
CBP CAC HACB HAC 120.0 120.0
CBP CAC HACB HACA 240.0 240.0
HAC CAC HACB HACA 120.0 120.0
CBP CAD HAD HADA 120.0 120.0
CBP CAD HAD HADB 240.0 240.0
HADA CAD HAD HADB 120.0 120.0
CBP CAD HADA HAD 240.0 240.0
CBP CAD HADA HADB 120.0 120.0
HAD CAD HADA HADB 240.0 240.0
CBP CAD HADB HAD 120.0 120.0
CBP CAD HADB HADA 240.0 240.0
HAD CAD HADB HADA 120.0 120.0
HAEA CAE HAE HAEB 120.0 120.0
HAE CAE HAEA HAEB 240.0 240.0
HAE CAE HAEB HAEA 120.0 120.0
CAW NBL CAX HAX 187.4 173.7
CAW NBL CAX HAXA 306.3 294.0
CAV CAX NBL HAX 240.0 240.2
CAV CAX NBL HAXA 121.1 119.9
HAX CAX NBL HAXA 241.2 239.7
NBL CAX CAV HAX 120.0 119.8
NBL CAX CAV HAXA 238.8 240.1
HAX CAX CAV HAXA 118.8 120.4
NBL CAX HAX HAXA 121.2 120.3
CAV CAX HAX HAXA 238.8 239.6
NBL CAX HAXA HAX 239.2 239.7
CAV CAX HAXA HAX 120.8 120.4
CBK CAV CAX HAX 188.4 185.6
CBK CAV CAX HAXA 69.5 65.2
HAV CAV CBK HAVA 121.9 120.1
HAV CAV CAX HAX 308.3 305.6
HAV CAV CAX HAXA 189.5 185.2
CBK CAV HAV HAVA 241.7 239.9
HAVA CAV CAX HAX 70.2 65.6
HAVA CAV CAX HAXA 311.4 305.3
CBK CAV HAVA HAV 118.8 120.1
HAW CAW CAU HAWA 117.8 120.3
CAU CAW HAW HAWA 237.5 239.6
CAU CAW HAWA HAW 121.6 120.3
CAU CBK CAV HAV 285.6 301.2
CAU CBK CAV HAVA 163.7 181.1
CBK CAU CAW HAW 298.3 294.8
CBK CAU CAW HAWA 180.6 174.4
HAU CAU CBK HAUA 121.1 120.1
CBB CBK CAU HBK 123.4 120.0
CAU CBK CBB HBB 33.5 304.4
CAU CBK CBB HBBA 157.8 64.4
HAU CAU CAW HAW 58.4 54.8
HAU CAU CAW HAWA 300.6 294.5
CBK CAU HAU HAUA 241.1 240.0
HAU CAU CBK CBB 77.1 58.6
HAU CAU CBK HBK 313.7 298.6
HAUA CAU CAW HAW 179.5 174.9
HAUA CAU CAW HAWA 61.7 54.6
CBK CAU HAUA HAU 119.3 120.1
HAUA CAU CBK CBB 316.0 298.5
HAUA CAU CBK HBK 192.6 178.6
CBB CBK CAV HAV 44.6 61.4
CBB CBK CAV HAVA 282.7 301.3
CBB CBK CAU HAU 77.1 58.6
CBB CBK CAU HAUA 316.0 298.5
CAU CBK CBB HBK 241.9 240.0
NBN CBB CBK HBB 240.0 240.0
NBN CBB CBK HBBA 115.7 120.0
HBB CBB CBK HBBA 235.7 240.0
HBK CBK CAV HAV 167.5 181.2
HBK CBK CAV HAVA 45.6 61.1
HBK CBK CAU HAU 313.7 298.6
HBK CBK CAU HAUA 192.6 178.6
CAU CBK HBK CBB 121.7 120.0
HBK CBK CBB HBB 151.6 64.4
HBK CBK CBB HBBA 275.9 184.4
NBN CBB CBK HBK 31.6 304.4
CBK CBB NBN HBB 120.0 120.0
CBK CBB NBN HBBA 244.3 240.0
HBB CBB NBN HBBA 124.3 120.0
HBB CBB CBK HBK 151.6 64.4
CBK CBB HBB HBBA 116.3 120.0
NBN CBB HBB HBBA 243.7 240.0
HBBA CBB CBK HBK 275.9 184.4
CBK CBB HBBA HBB 242.6 240.0
NBN CBB HBBA HBB 117.4 120.0
CAZ NBN CBB HBB 221.3 152.8
CAZ NBN CBB HBBA 97.0 32.9
SBQ NBN CBB HBB 2.3 332.8
SBQ NBN CBB HBBA 238.0 212.9
OAH SBQ OAI CBJ 242.4 122.9
OAI SBQ CBJ CAN 219.4 0.1
OAI SBQ CBJ OAH 240.4 132.9
SBQ CBJ CAN CAL 180.7 180.0
SBQ CBJ CAN HAN 0.7 0.0
OAI SBQ OAH CBJ 120.1 237.1
OAH SBQ CBJ CAN 338.9 227.2
CBF CBJ CAN HAN 181.4 180.3
CAL CAN CBJ HAN 180.0 179.9
CBJ CAN CAL HAL 179.7 179.9
CBJ CAN CAL HAN 180.0 180.1
CAK CAL CAN HAL 180.0 180.2
CBJ CAN HAN CAL 180.0 179.9
HAN CAN CAL HAL 359.6 359.9
CAK CAL CAN HAN 179.7 180.0
CAN CAL CAK HAL 180.0 179.8
HAL CAL CAN HAN 359.6 359.9
CAM CAK CAL HAL 179.8 180.1
HAK CAK CAL HAL 359.9 0.1
CBF CAM CAK HAK 179.5 179.7
HAM CAM CAK HAK 359.5 360.0
CAA CBF CAM HAM 0.4 360.0
HAAA CAA HAA HAAB 120.0 119.9
HAA CAA HAAA HAAB 240.0 240.0
HAA CAA HAAB HAAA 120.0 119.9
HAZ CAZ CAY HAZA 119.6 120.0
CAY CAZ HAZ HAZA 239.5 240.0
CAY CAZ HAZA HAZ 120.3 120.0
NBM CAY CAZ HAZ 77.3 62.2
NBM CAY CAZ HAZA 317.7 302.2
HAY CAY NBM HAYA 120.1 120.1
HAY CAY CAZ HAZ 197.3 182.3
HAY CAY CAZ HAZA 77.6 62.3
NBM CAY HAY HAYA 240.1 239.9
HAYA CAY CAZ HAZ 317.4 302.3
HAYA CAY CAZ HAZA 197.8 182.3
NBM CAY HAYA HAY 119.9 120.1
CBA NBM CAY HAY 353.8 143.9
CBA NBM CAY HAYA 233.7 23.8
CBH NBM CAY HAY 137.6 323.9
CBH NBM CAY HAYA 17.4 203.8
CAQ CBH CAR HAR 182.4 179.8
CAP CAR CBH HAR 180.0 180.0
CAO CAQ CBH CAR 357.9 0.3
HAQ CAQ CBH CAR 177.9 180.3
CBG CAO CAQ HAQ 180.6 180.0
CAO CBG CAP HAP 179.6 180.3
HAO CAO CAQ HAQ 0.6 0.0
HAO CAO CBG CAP 180.7 179.7
CBH CAR CAP HAR 180.0 180.0
CAO CBG CAP CAR 359.6 0.3
CAP CBG CAO HAO 180.7 179.7
CBG CAP CAR HAR 178.8 179.9
HAP CAP CAR HAR 358.8 360.0
CAJ CBG CAO HAO 359.2 359.9
CAJ CBG CAP HAP 1.0 0.0
HBA CBA CBI HBAA 121.6 120.1
CBI CBA HBA HBAA 241.5 239.9
CBI CBA HBAA HBA 119.0 120.1
NBO CBI CBA HBA 59.8 153.5
NBO CBI CBA HBAA 298.2 33.4
CAS CBI CBA HBA 239.9 333.9
CAS CBI CBA HBAA 118.3 213.8
CAT NBC CAS HAS 179.5 180.0
CAT NBO CAB HAB 151.2 89.3
CAT NBO CAB HABA 271.1 209.3
CAT NBO CAB HABB 31.2 329.3
HAT CAT NBO CAB 360.0 359.8
CAB NBO CAT HAT 360.0 359.8
HAB CAB NBO HABA 240.0 240.0
HAB CAB NBO HABB 120.0 120.0
HABA CAB NBO HABB 240.0 240.0
NBO CAB HAB HABA 120.0 120.0
NBO CAB HAB HABB 240.0 240.0
HABA CAB HAB HABB 120.0 120.0
NBO CAB HABA HAB 240.0 240.0
NBO CAB HABA HABB 120.0 120.0
HAB CAB HABA HABB 240.0 240.0
NBO CAB HABB HAB 120.0 120.0
NBO CAB HABB HABA 240.0 240.1
HAB CAB HABB HABA 120.0 120.0