PDB Chemical Component E90
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for E90
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C2 |
N1 |
1.371 |
1.326 |
| N1 |
C6 |
1.333 |
1.323 |
| S7 |
C2 |
1.708 |
1.761 |
| N3 |
C2 |
1.352 |
1.325 |
| N3 |
C4 |
1.374 |
1.323 |
| C4 |
C5 |
1.412 |
1.386 |
| C4 |
H4 |
1.080 |
1.080 |
| C5 |
C6 |
1.417 |
1.386 |
| C5 |
H5 |
1.080 |
1.080 |
| C6 |
H6 |
1.080 |
1.080 |
| S7 |
C8 |
1.833 |
1.811 |
| C8 |
C9 |
1.539 |
1.507 |
| C8 |
H8 |
1.100 |
1.089 |
| C8 |
H8A |
1.100 |
1.089 |
| O10 |
C9 |
1.245 |
1.213 |
| C9 |
C11 |
1.499 |
1.472 |
| C11 |
C16 |
1.392 |
1.399 |
| C11 |
C12 |
1.406 |
1.398 |
| C12 |
C13 |
1.374 |
1.378 |
| C12 |
H12 |
1.080 |
1.080 |
| C13 |
C14 |
1.390 |
1.384 |
| C13 |
H13 |
1.080 |
1.080 |
| C15 |
C14 |
1.372 |
1.384 |
| C14 |
S17 |
1.774 |
1.762 |
| C16 |
C15 |
1.397 |
1.378 |
| C15 |
H15 |
1.080 |
1.081 |
| C16 |
H16 |
1.080 |
1.081 |
| N20 |
S17 |
1.632 |
1.656 |
| O19 |
S17 |
1.464 |
1.421 |
| S17 |
O18 |
1.451 |
1.421 |
| N20 |
HN20 |
1.000 |
0.970 |
| N20 |
HN2A |
1.000 |
0.970 |
Bond Angles for E90
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C2 |
N1 |
C6 |
118.5 |
120.8 |
| N1 |
C6 |
C5 |
120.2 |
119.2 |
| N1 |
C6 |
H6 |
119.9 |
120.4 |
| N3 |
C4 |
C5 |
120.6 |
119.2 |
| N3 |
C4 |
H4 |
119.7 |
120.4 |
| C5 |
C4 |
H4 |
119.7 |
120.4 |
| C4 |
C5 |
C6 |
118.4 |
118.6 |
| C4 |
C5 |
H5 |
120.8 |
120.7 |
| C6 |
C5 |
H5 |
120.8 |
120.7 |
| C5 |
C6 |
H6 |
119.9 |
120.4 |
| S7 |
C8 |
C9 |
112.6 |
109.5 |
| S7 |
C8 |
H8 |
108.4 |
109.4 |
| S7 |
C8 |
H8A |
108.5 |
109.4 |
| C9 |
C8 |
H8 |
108.4 |
109.5 |
| C9 |
C8 |
H8A |
108.4 |
109.5 |
| C8 |
C9 |
C11 |
118.0 |
120.0 |
| H8 |
C8 |
H8A |
110.5 |
109.5 |
| O10 |
C9 |
C11 |
119.0 |
120.0 |
| C9 |
C11 |
C16 |
121.4 |
120.2 |
| C9 |
C11 |
C12 |
119.4 |
120.2 |
| C12 |
C11 |
C16 |
119.1 |
119.7 |
| C11 |
C16 |
C15 |
121.3 |
119.8 |
| C11 |
C16 |
H16 |
119.3 |
120.1 |
| C11 |
C12 |
C13 |
120.0 |
119.8 |
| C11 |
C12 |
H12 |
120.0 |
120.1 |
| C13 |
C12 |
H12 |
120.0 |
120.1 |
| C12 |
C13 |
C14 |
119.0 |
120.2 |
| C12 |
C13 |
H13 |
120.5 |
119.9 |
| C14 |
C13 |
H13 |
120.5 |
119.9 |
| C13 |
C14 |
S17 |
116.9 |
119.9 |
| C15 |
C14 |
S17 |
120.2 |
119.8 |
| C14 |
S17 |
O18 |
104.8 |
106.4 |
| C16 |
C15 |
H15 |
121.3 |
119.9 |
| HN20 |
N20 |
HN2A |
109.5 |
120.0 |
Torsion Angles for E90
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C2 |
N1 |
C6 |
C5 |
356.6 |
360.0 |
| C2 |
N1 |
C6 |
H6 |
176.6 |
180.0 |
| C4 |
C5 |
C6 |
N1 |
6.1 |
0.0 |
| N1 |
C6 |
C5 |
H5 |
186.1 |
180.0 |
| C5 |
C6 |
N1 |
H6 |
180.0 |
180.0 |
| N3 |
C2 |
N1 |
C6 |
1.5 |
0.0 |
| C5 |
C4 |
N3 |
H4 |
180.0 |
180.0 |
| N3 |
C4 |
C5 |
C6 |
353.2 |
0.0 |
| N3 |
C4 |
C5 |
H5 |
173.2 |
180.0 |
| N1 |
C6 |
C5 |
C4 |
6.1 |
0.0 |
| N3 |
C4 |
C5 |
H4 |
180.0 |
180.0 |
| C6 |
C5 |
C4 |
H5 |
180.0 |
180.0 |
| C4 |
C5 |
C6 |
H6 |
186.1 |
180.0 |
| N3 |
C4 |
H4 |
C5 |
180.0 |
180.0 |
| H4 |
C4 |
C5 |
C6 |
173.2 |
180.0 |
| H4 |
C4 |
C5 |
H5 |
353.2 |
360.0 |
| N1 |
C6 |
C5 |
H6 |
180.0 |
180.0 |
| C6 |
C5 |
C4 |
H4 |
173.2 |
180.0 |
| C4 |
C5 |
C6 |
H5 |
180.0 |
180.0 |
| H5 |
C5 |
C4 |
H4 |
353.2 |
360.0 |
| C4 |
C5 |
H5 |
C6 |
180.0 |
180.0 |
| H5 |
C5 |
C6 |
H6 |
6.0 |
360.0 |
| N1 |
C6 |
H6 |
C5 |
180.0 |
180.0 |
| H6 |
C6 |
C5 |
H5 |
6.0 |
360.0 |
| C9 |
C8 |
S7 |
H8 |
240.0 |
240.0 |
| C9 |
C8 |
S7 |
H8A |
120.0 |
120.0 |
| S7 |
C8 |
C9 |
C11 |
174.7 |
180.0 |
| H8 |
C8 |
S7 |
H8A |
240.0 |
240.0 |
| S7 |
C8 |
C9 |
H8 |
120.0 |
120.0 |
| S7 |
C8 |
C9 |
H8A |
240.0 |
240.0 |
| H8 |
C8 |
C9 |
H8A |
120.0 |
120.1 |
| O10 |
C9 |
C8 |
C11 |
180.8 |
180.1 |
| C8 |
C9 |
C11 |
C16 |
182.0 |
180.0 |
| C8 |
C9 |
C11 |
C12 |
0.6 |
0.3 |
| S7 |
C8 |
H8 |
C9 |
237.4 |
240.0 |
| S7 |
C8 |
H8 |
H8A |
118.7 |
120.0 |
| C9 |
C8 |
H8 |
H8A |
241.3 |
239.9 |
| H8 |
C8 |
C9 |
C11 |
54.8 |
60.0 |
| S7 |
C8 |
H8A |
C9 |
122.6 |
120.0 |
| S7 |
C8 |
H8A |
H8 |
241.3 |
240.0 |
| C9 |
C8 |
H8A |
H8 |
118.7 |
120.1 |
| H8A |
C8 |
C9 |
C11 |
294.8 |
300.0 |
| O10 |
C9 |
C8 |
H8 |
235.5 |
240.1 |
| O10 |
C9 |
C8 |
H8A |
115.5 |
120.0 |
| C8 |
C9 |
O10 |
C11 |
179.2 |
179.9 |
| O10 |
C9 |
C11 |
C16 |
1.3 |
360.0 |
| O10 |
C9 |
C11 |
C12 |
179.9 |
180.3 |
| C11 |
C9 |
C8 |
H8 |
54.8 |
60.0 |
| C11 |
C9 |
C8 |
H8A |
294.8 |
300.0 |
| C12 |
C11 |
C9 |
C16 |
178.6 |
180.3 |
| C9 |
C11 |
C16 |
C15 |
175.1 |
179.7 |
| C9 |
C11 |
C16 |
H16 |
355.1 |
0.0 |
| C9 |
C11 |
C12 |
C13 |
181.5 |
180.0 |
| C9 |
C11 |
C12 |
H12 |
1.5 |
359.9 |
| C9 |
C11 |
C16 |
C12 |
178.6 |
180.3 |
| C16 |
C11 |
C12 |
C13 |
0.1 |
0.3 |
| C16 |
C11 |
C12 |
H12 |
180.1 |
180.2 |
| C11 |
C16 |
C15 |
H15 |
184.4 |
180.2 |
| C9 |
C11 |
C12 |
C16 |
181.3 |
179.7 |
| C12 |
C11 |
C16 |
C15 |
356.4 |
359.5 |
| C12 |
C11 |
C16 |
H16 |
176.4 |
179.7 |
| C13 |
C12 |
C11 |
H12 |
180.0 |
180.1 |
| C11 |
C12 |
C13 |
C14 |
2.3 |
360.0 |
| C11 |
C12 |
C13 |
H13 |
182.3 |
180.0 |
| C13 |
C12 |
C11 |
C16 |
0.1 |
0.3 |
| C11 |
C12 |
C13 |
H12 |
180.0 |
179.9 |
| C14 |
C13 |
C12 |
H13 |
180.0 |
180.0 |
| C12 |
C13 |
C14 |
S17 |
179.3 |
180.0 |
| H12 |
C12 |
C11 |
C16 |
180.1 |
180.2 |
| C11 |
C12 |
H12 |
C13 |
180.0 |
180.1 |
| H12 |
C12 |
C13 |
C14 |
182.3 |
180.1 |
| H12 |
C12 |
C13 |
H13 |
2.3 |
0.0 |
| C14 |
C13 |
C12 |
H12 |
182.3 |
180.1 |
| C12 |
C13 |
C14 |
H13 |
180.0 |
180.0 |
| C15 |
C14 |
C13 |
S17 |
179.3 |
180.1 |
| C13 |
C14 |
S17 |
O18 |
71.0 |
203.6 |
| H13 |
C13 |
C12 |
H12 |
2.3 |
0.0 |
| C12 |
C13 |
H13 |
C14 |
180.0 |
180.0 |
| H13 |
C13 |
C14 |
S17 |
359.3 |
0.0 |
| C11 |
C16 |
C15 |
C14 |
4.4 |
0.6 |
| C15 |
C14 |
C13 |
H13 |
178.6 |
180.1 |
| C13 |
C14 |
C15 |
S17 |
180.7 |
179.9 |
| C15 |
C14 |
S17 |
O18 |
251.7 |
23.5 |
| S17 |
C14 |
C13 |
H13 |
359.3 |
0.0 |
| C11 |
C16 |
C15 |
H16 |
180.0 |
180.3 |
| C16 |
C15 |
C14 |
S17 |
177.4 |
179.7 |
| H15 |
C15 |
C14 |
S17 |
357.4 |
0.1 |
| C11 |
C16 |
H16 |
C15 |
180.0 |
179.7 |
| H16 |
C16 |
C15 |
H15 |
4.4 |
360.0 |