PDB Chemical Component E7Y

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for E7Y

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C25 C24 1.533 1.530
C24 C23 1.530 1.530
C22 C23 1.524 1.530
C22 C21 1.529 1.530
C20 C19 1.325 1.310
C20 C21 1.528 1.506
C19 C18 1.531 1.506
C18 C17 1.534 1.507
C17 C16 1.324 1.310
C16 C15 1.533 1.507
C07 C08 1.520 1.530
C07 C06 1.523 1.507
C12 C13 1.531 1.507
C12 C11 1.532 1.507
C08 C09 1.522 1.530
C15 C14 1.525 1.507
C13 C14 1.330 1.310
C06 C11 1.319 1.310
C04 O05 1.403 1.429
C04 C03 1.535 1.530
C09 C10 1.522 1.508
C10 O02 1.184 1.213
C10 N01 1.449 1.347
N01 C03 1.454 1.465
C11 H1 1.080 1.079
C12 H2 1.100 1.091
C12 H3 1.100 1.090
C13 H4 1.080 1.081
C15 H5 1.100 1.091
C15 H6 1.100 1.089
C16 H7 1.080 1.079
C19 H8 1.079 1.080
C21 H9 1.100 1.090
C21 H10 1.100 1.091
C22 H11 1.100 1.089
C22 H12 1.100 1.091
C23 H13 1.100 1.090
C23 H14 1.100 1.090
C25 H15 1.100 1.090
C25 H16 1.100 1.089
C25 H17 1.100 1.090
C18 H18 1.100 1.090
C18 H19 1.100 1.091
C20 H20 1.080 1.080
N01 H21 1.000 0.970
C03 H22 1.100 1.090
C03 H23 1.099 1.089
C04 H24 1.100 1.091
C04 H25 1.100 1.090
O05 H26 0.950 0.967
C06 H27 1.080 1.081
C07 H28 1.100 1.090
C07 H29 1.100 1.090
C08 H30 1.100 1.090
C08 H31 1.100 1.090
C09 H32 1.100 1.090
C09 H33 1.100 1.090
C14 H34 1.080 1.080
C17 H35 1.080 1.081
C24 H36 1.100 1.089
C24 H37 1.100 1.091

Bond Angles for E7Y

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C24 C25 H15 109.5 109.5
C24 C25 H16 109.4 109.5
C24 C25 H17 109.5 109.5
C25 C24 H36 108.3 109.5
C25 C24 H37 108.3 109.5
C24 C23 H13 108.5 109.5
C24 C23 H14 108.5 109.5
C23 C22 H11 108.7 109.5
C23 C22 H12 108.7 109.5
C22 C23 H13 108.5 109.5
C22 C23 H14 108.5 109.4
C22 C21 H9 109.3 109.5
C22 C21 H10 109.3 109.5
C20 C19 H8 118.2 120.0
C20 C21 H9 109.3 109.5
C20 C21 H10 109.3 109.5
C19 C18 C17 111.3 109.5
C18 C19 H8 118.2 120.0
C19 C18 H18 109.0 109.5
C19 C18 H19 109.0 109.5
C17 C18 H18 109.0 109.5
C17 C18 H19 109.0 109.5
C18 C17 H35 117.2 120.0
C17 C16 H7 117.4 120.0
C16 C15 C14 111.0 109.5
C16 C15 H5 109.1 109.4
C16 C15 H6 109.1 109.5
C07 C08 C09 111.2 109.4
C08 C07 H28 109.1 109.5
C08 C07 H29 109.2 109.4
C07 C08 H30 109.1 109.5
C07 C08 H31 109.1 109.5
C07 C06 H27 118.9 120.0
C12 C13 C14 124.5 120.1
C13 C12 H2 109.2 109.4
C13 C12 H3 109.1 109.5
C12 C13 H4 117.7 119.9
C12 C11 H1 118.2 120.0
C09 C08 H30 109.0 109.5
C09 C08 H31 109.0 109.5
C08 C09 H32 109.6 109.5
C08 C09 H33 109.6 109.5
C13 C14 C15 124.4 120.0
C14 C15 H5 109.1 109.4
C14 C15 H6 109.1 109.5
C15 C14 H34 117.8 120.0
C14 C13 H4 117.7 120.0
C13 C14 H34 117.8 120.0
C06 C11 H1 118.2 120.0
O05 C04 H24 109.8 109.5
O05 C04 H25 109.8 109.4
C04 O05 H26 109.5 114.0
C04 C03 H22 109.2 109.4
C04 C03 H23 109.2 109.5
N01 C10 O02 119.1 120.0
C10 N01 C03 120.1 120.0
C10 N01 H21 119.9 120.0
C03 N01 H21 120.0 120.0
N01 C03 H22 109.1 109.5
N01 C03 H23 109.2 109.5
H2 C12 H3 109.5 109.5
H5 C15 H6 109.4 109.5
H9 C21 H10 109.5 109.5
H11 C22 H12 109.4 109.5
H13 C23 H14 109.4 109.5
H15 C25 H16 109.5 109.5
H15 C25 H17 109.5 109.4
H16 C25 H17 109.5 109.5
H18 C18 H19 109.5 109.4
H22 C03 H23 109.5 109.5
H24 C04 H25 109.5 109.5
H28 C07 H29 109.5 109.5
H30 C08 H31 109.5 109.5
H32 C09 H33 109.4 109.5
H36 C24 H37 109.5 109.5

Torsion Angles for E7Y

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C25 C24 C23 H13 198.7 60.0
C25 C24 C23 H14 317.5 300.0
H15 C25 C24 H16 240.0 240.0
H15 C25 C24 H17 120.0 119.9
H16 C25 C24 H17 240.0 240.0
H36 C24 C25 H37 241.3 120.0
C24 C23 C22 H11 302.8 60.0
C24 C23 C22 H12 61.9 300.0
C22 C23 C24 H13 239.4 120.0
C22 C23 C24 H14 120.6 240.0
H13 C23 C24 H14 241.2 120.0
C24 C23 C22 H13 120.6 240.0
C24 C23 C22 H14 239.4 120.0
C23 C22 C21 H9 299.1 300.0
C23 C22 C21 H10 58.9 60.0
H11 C22 C23 H12 241.0 120.0
H13 C23 C22 H14 118.8 240.0
C20 C21 C22 H9 239.9 240.0
C20 C21 C22 H10 120.1 120.0
H9 C21 C22 H10 240.2 240.0
C20 C19 C18 C17 122.7 126.8
C18 C19 C20 H8 180.0 180.1
C20 C19 C18 H18 242.9 246.8
C20 C19 C18 H19 2.4 6.8
C22 C21 C20 H9 120.1 120.0
C22 C21 C20 H10 239.9 240.0
C21 C20 C19 H8 178.9 187.7
H9 C21 C20 H10 119.8 120.0
C20 C19 C18 H8 180.0 179.9
C17 C18 C19 H18 239.7 240.0
C17 C18 C19 H19 120.3 120.0
C19 C18 C17 H35 39.8 306.9
H18 C18 C19 H19 240.5 240.1
C17 C18 C19 H8 302.7 306.8
C19 C18 C17 H18 120.3 120.1
C19 C18 C17 H19 239.7 240.0
C18 C17 C16 H7 180.4 187.8
H18 C18 C17 H19 119.5 119.9
C17 C16 C15 H5 252.9 246.7
C17 C16 C15 H6 12.4 6.7
C13 C14 C15 C16 240.9 126.4
C14 C15 C16 H5 239.8 240.1
C14 C15 C16 H6 120.3 120.1
C16 C15 C14 H34 60.9 306.3
H5 C15 C16 H6 240.5 240.0
C08 C07 C06 H27 322.5 309.6
C09 C08 C07 H30 239.8 240.0
C09 C08 C07 H31 120.2 120.0
C07 C08 C09 H32 304.6 60.1
C07 C08 C09 H33 64.8 300.0
H28 C07 C08 H29 240.4 120.0
H30 C08 C07 H31 240.5 240.0
C07 C06 C11 H1 180.1 188.3
C13 C12 C11 H1 83.5 309.7
C12 C13 C14 C15 359.7 7.0
C14 C13 C12 H4 180.0 180.1
C12 C13 C14 H34 179.7 187.1
H2 C12 C13 H3 240.4 120.0
C06 C11 C12 H1 180.0 179.9
C09 C08 C07 H28 52.1 60.0
C09 C08 C07 H29 171.7 300.0
C07 C08 C09 H30 120.3 120.0
C07 C08 C09 H31 239.7 240.0
H30 C08 C09 H31 119.5 120.0
H32 C09 C08 H33 239.8 120.1
C16 C15 C14 H5 120.2 119.9
C16 C15 C14 H6 239.8 239.9
C15 C14 C13 H4 179.7 187.2
C13 C14 C15 H34 180.0 180.1
H5 C15 C14 H6 119.5 120.0
C16 C15 C14 C13 240.9 126.4
C14 C13 C12 H2 353.0 6.5
C14 C13 C12 H3 112.6 246.5
C12 C13 C14 H4 180.0 179.9
C13 C14 C15 H5 120.7 6.5
C13 C14 C15 H6 1.2 246.5
C15 C14 C13 H34 180.0 179.9
C12 C11 C06 H1 180.0 180.1
O05 C04 C03 H22 299.4 305.0
O05 C04 C03 H23 59.1 185.0
H24 C04 O05 H25 239.6 120.0
C04 C03 N01 H21 86.7 0.0
N01 C03 C04 H22 239.8 120.0
N01 C03 C04 H23 120.2 240.0
H22 C03 C04 H23 240.4 120.0
C09 C10 N01 H21 359.6 359.7
O02 C10 N01 C03 0.1 0.1
O02 C10 N01 H21 180.1 180.0
C03 N01 C10 H21 180.0 180.1
C10 N01 C03 H22 146.4 299.9
C10 N01 C03 H23 26.8 60.0
C04 C03 N01 H22 120.2 240.0
C04 C03 N01 H23 239.8 120.0
C03 N01 C10 O02 0.1 0.1
C10 N01 C03 H21 180.0 179.9
H22 C03 N01 H23 119.6 240.0
H2 C12 C13 C14 353.0 6.5
C13 C12 H2 H3 119.4 240.0
H2 C12 C13 H4 173.0 186.3
H2 C12 C11 H1 323.3 69.7
H3 C12 C13 C14 112.6 246.5
C13 C12 H3 H2 240.6 119.9
H3 C12 C13 H4 292.6 66.4
H3 C12 C11 H1 203.7 189.7
C12 C13 H4 C14 180.0 180.1
H4 C13 C12 H2 173.0 186.3
H4 C13 C12 H3 292.6 66.4
H4 C13 C14 C15 179.7 187.2
H4 C13 C14 H34 359.7 7.3
C16 C15 H5 C14 238.6 240.1
C16 C15 H5 H6 119.3 120.0
C14 C15 H5 H6 240.7 239.9
H5 C15 C14 H34 300.7 186.4
C16 C15 H6 C14 121.4 120.0
C16 C15 H6 H5 240.7 240.0
C14 C15 H6 H5 119.3 120.0
H6 C15 C14 H34 181.2 66.3
H7 C16 C15 C14 312.7 306.9
H7 C16 C15 H5 72.9 66.8
H7 C16 C15 H6 192.4 186.8
H8 C19 C18 C17 302.7 306.8
H8 C19 C18 H18 62.9 66.9
H8 C19 C18 H19 182.4 186.8
C22 C21 H9 H10 119.7 120.0
C20 C21 H9 H10 240.3 240.0
C22 C21 H10 H9 240.3 240.0
C20 C21 H10 H9 119.7 120.0
C23 C22 H11 H12 118.5 240.0
H11 C22 C23 H13 182.2 180.0
H11 C22 C23 H14 63.4 300.0
H11 C22 C21 H9 178.6 60.0
H11 C22 C21 H10 298.4 180.0
C23 C22 H12 H11 241.4 120.0
H12 C22 C23 H13 301.2 60.0
H12 C22 C23 H14 182.4 180.0
H12 C22 C21 H9 59.6 180.0
H12 C22 C21 H10 179.4 300.0
C24 C23 H13 H14 118.2 240.0
H13 C23 C22 H11 182.2 180.0
H13 C23 C22 H12 301.2 60.0
C22 C23 H13 H14 241.8 120.0
C24 C23 H14 H13 241.8 120.0
H14 C23 C22 H11 63.4 300.0
H14 C23 C22 H12 182.4 180.0
C22 C23 H14 H13 118.2 240.0
C24 C25 H15 H16 120.0 120.0
C24 C25 H15 H17 240.0 240.0
H15 C25 C24 H36 300.6 60.0
H15 C25 C24 H37 59.3 300.0
H16 C25 H15 H17 120.0 120.0
C24 C25 H16 H15 240.0 240.0
C24 C25 H16 H17 120.0 120.0
H16 C25 C24 H36 60.6 180.0
H16 C25 C24 H37 179.3 60.0
H15 C25 H16 H17 240.0 240.0
C24 C25 H17 H15 120.0 120.0
C24 C25 H17 H16 240.0 239.9
H17 C25 C24 H36 180.6 300.0
H17 C25 C24 H37 299.3 180.0
H15 C25 H17 H16 120.0 120.0
C19 C18 H18 C17 238.3 239.9
H18 C18 C19 H8 62.9 66.9
C19 C18 H18 H19 119.2 120.0
C17 C18 H18 H19 240.8 240.0
H18 C18 C17 H35 279.6 186.8
C19 C18 H19 C17 121.7 120.1
H19 C18 C19 H8 182.4 186.8
C19 C18 H19 H18 240.8 240.0
C17 C18 H19 H18 119.1 120.0
H19 C18 C17 H35 160.1 66.9
H20 C20 C19 H8 358.8 7.7
H20 C20 C21 H9 261.7 186.8
H20 C20 C21 H10 141.8 66.8
H21 N01 C10 O02 180.1 180.0
C10 N01 H21 C03 180.0 180.1
H21 N01 C03 H22 326.5 120.0
H21 N01 C03 H23 206.8 240.0
C04 C03 H22 H23 119.4 240.0
H22 C03 N01 H21 326.5 120.0
N01 C03 H22 H23 240.6 120.1
C04 C03 H23 H22 240.5 119.9
H23 C03 N01 H21 206.8 240.0
N01 C03 H23 H22 119.4 240.0
O05 C04 H24 H25 120.6 240.1
H24 C04 O05 H26 299.8 59.9
H24 C04 C03 H22 179.6 65.0
H24 C04 C03 H23 299.3 305.0
O05 C04 H25 H24 239.4 120.0
H25 C04 O05 H26 60.2 299.9
H25 C04 C03 H22 59.2 185.0
H25 C04 C03 H23 178.9 65.0
H26 O05 C04 H24 299.8 59.9
H26 O05 C04 H25 60.2 299.9
H27 C06 C11 H1 0.1 8.3
H28 C07 C08 C09 52.1 60.0
C08 C07 H28 H29 119.4 240.0
H28 C07 C08 H30 172.3 180.0
H28 C07 C08 H31 291.8 300.0
H28 C07 C06 H27 202.3 69.7
H29 C07 C08 C09 171.7 300.0
C08 C07 H29 H28 240.6 120.0
H29 C07 C08 H30 292.0 60.0
H29 C07 C08 H31 51.5 180.0
H29 C07 C06 H27 82.7 189.7
C07 C08 H30 C09 238.4 240.0
H30 C08 C07 H28 172.3 180.0
H30 C08 C07 H29 292.0 60.0
C07 C08 H30 H31 119.2 120.0
C09 C08 H30 H31 240.8 240.0
H30 C08 C09 H32 184.3 300.1
H30 C08 C09 H33 304.5 180.0
C07 C08 H31 C09 121.6 119.9
H31 C08 C07 H28 291.8 300.0
H31 C08 C07 H29 51.5 180.0
C07 C08 H31 H30 240.8 240.0
C09 C08 H31 H30 119.2 120.0
H31 C08 C09 H32 64.9 180.0
H31 C08 C09 H33 185.0 60.0
H32 C09 C08 H30 184.3 300.1
H32 C09 C08 H31 64.9 180.0
C08 C09 H32 H33 120.3 239.9
H33 C09 C08 H30 304.5 180.0
H33 C09 C08 H31 185.0 60.0
C08 C09 H33 H32 239.7 120.0
C13 C14 H34 C15 180.0 179.9
H34 C14 C15 H5 300.7 186.4
H34 C14 C15 H6 181.2 66.3
H34 C14 C13 H4 359.7 7.3
H35 C17 C18 H18 279.6 186.8
H35 C17 C18 H19 160.1 66.9
H35 C17 C16 H7 0.4 7.7
H36 C24 C25 H15 300.6 60.0
H36 C24 C25 H16 60.6 180.0
H36 C24 C25 H17 180.6 300.0
C25 C24 H36 H37 117.9 240.0
H36 C24 C23 H13 78.1 180.0
H36 C24 C23 H14 196.9 60.0
H37 C24 C25 H15 59.3 300.0
H37 C24 C25 H16 179.3 60.0
H37 C24 C25 H17 299.3 180.0
C25 C24 H37 H36 242.1 120.0
H37 C24 C23 H13 319.4 300.0
H37 C24 C23 H14 78.2 180.0