PDB Chemical Component E7P
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for E7P
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| O2 |
P |
1.546 |
1.479 |
| O |
C |
1.215 |
1.208 |
| CA |
C |
1.557 |
1.507 |
| CA |
N |
1.474 |
1.468 |
| CA |
C2 |
1.536 |
1.530 |
| C |
OXT |
1.304 |
1.342 |
| P |
O3 |
1.495 |
1.610 |
| P |
C1 |
1.785 |
1.823 |
| P |
O1 |
1.545 |
1.611 |
| C1 |
C2 |
1.507 |
1.530 |
| O1 |
H1 |
0.950 |
0.968 |
| C1 |
H4 |
1.100 |
1.090 |
| C1 |
H3 |
1.100 |
1.090 |
| CA |
HA |
1.100 |
1.090 |
| C2 |
H5 |
1.100 |
1.090 |
| C2 |
H6 |
1.100 |
1.090 |
| OXT |
HXT |
0.950 |
0.967 |
| N |
H |
1.000 |
1.010 |
| N |
H2 |
1.000 |
1.009 |
| O3 |
H11 |
0.950 |
0.967 |
Bond Angles for E7P
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O2 |
P |
O3 |
112.2 |
109.5 |
| O2 |
P |
C1 |
106.7 |
109.5 |
| O |
C |
OXT |
124.2 |
120.0 |
| CA |
C |
OXT |
115.8 |
120.0 |
| C2 |
CA |
N |
114.6 |
109.5 |
| N |
CA |
HA |
109.3 |
109.5 |
| CA |
N |
H |
109.5 |
111.0 |
| CA |
N |
H2 |
109.5 |
111.0 |
| C1 |
C2 |
CA |
113.5 |
109.5 |
| C2 |
CA |
HA |
108.5 |
109.4 |
| CA |
C2 |
H5 |
108.5 |
109.5 |
| CA |
C2 |
H6 |
108.5 |
109.5 |
| C |
OXT |
HXT |
109.5 |
117.0 |
| P |
O3 |
H11 |
109.5 |
114.0 |
| P |
C1 |
H4 |
108.1 |
109.5 |
| P |
C1 |
H3 |
108.1 |
109.5 |
| P |
O1 |
H1 |
109.5 |
114.0 |
| C2 |
C1 |
H4 |
108.1 |
109.4 |
| C2 |
C1 |
H3 |
108.1 |
109.4 |
| C1 |
C2 |
H5 |
108.5 |
109.5 |
| C1 |
C2 |
H6 |
108.4 |
109.5 |
| H4 |
C1 |
H3 |
109.4 |
109.5 |
| H5 |
C2 |
H6 |
109.5 |
109.4 |
| H |
N |
H2 |
109.5 |
111.0 |
Torsion Angles for E7P
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O2 |
P |
O3 |
H11 |
360.0 |
300.0 |
| O2 |
P |
C1 |
H4 |
194.9 |
295.0 |
| O2 |
P |
C1 |
H3 |
313.3 |
175.0 |
| O2 |
P |
O1 |
H1 |
0.0 |
180.0 |
| CA |
C |
O |
OXT |
180.0 |
180.0 |
| O |
C |
OXT |
HXT |
0.0 |
0.0 |
| O |
C |
CA |
OXT |
180.0 |
180.0 |
| C1 |
C2 |
CA |
C |
162.0 |
175.0 |
| CA |
C |
OXT |
HXT |
180.1 |
180.0 |
| N |
CA |
C |
OXT |
334.7 |
160.0 |
| C1 |
C2 |
CA |
N |
281.2 |
295.0 |
| C2 |
CA |
N |
HA |
122.0 |
120.0 |
| N |
CA |
C2 |
H5 |
41.8 |
175.0 |
| N |
CA |
C2 |
H6 |
160.7 |
55.1 |
| H |
N |
CA |
H2 |
240.0 |
236.1 |
| C2 |
CA |
C |
OXT |
99.1 |
280.0 |
| N |
CA |
C2 |
HA |
237.6 |
240.0 |
| C2 |
CA |
N |
H |
58.3 |
300.0 |
| C2 |
CA |
N |
H2 |
178.3 |
63.9 |
| CA |
C2 |
C1 |
H4 |
100.5 |
300.0 |
| CA |
C2 |
C1 |
H3 |
342.2 |
60.0 |
| C1 |
C2 |
CA |
H5 |
239.4 |
120.0 |
| C1 |
C2 |
CA |
H6 |
120.6 |
239.9 |
| H5 |
C2 |
CA |
H6 |
241.2 |
119.9 |
| O2 |
P |
O3 |
C1 |
119.3 |
120.0 |
| O3 |
P |
C1 |
H4 |
317.5 |
55.0 |
| O3 |
P |
C1 |
H3 |
75.8 |
295.0 |
| O3 |
P |
O1 |
H1 |
236.1 |
60.0 |
| O2 |
P |
C1 |
O3 |
237.5 |
240.0 |
| C1 |
P |
O1 |
H1 |
114.2 |
300.0 |
| C2 |
C1 |
P |
H4 |
239.2 |
120.0 |
| C2 |
C1 |
P |
H3 |
120.8 |
240.0 |
| P |
C1 |
C2 |
H5 |
100.7 |
300.0 |
| P |
C1 |
C2 |
H6 |
341.9 |
60.0 |
| H4 |
C1 |
P |
H3 |
241.7 |
120.0 |
| O2 |
P |
C1 |
C2 |
74.1 |
55.0 |
| C1 |
C2 |
CA |
HA |
43.6 |
55.0 |
| CA |
C2 |
C1 |
H5 |
120.6 |
240.0 |
| CA |
C2 |
C1 |
H6 |
239.4 |
120.0 |
| P |
C1 |
C2 |
H4 |
120.9 |
240.0 |
| P |
C1 |
C2 |
H3 |
239.2 |
120.0 |
| H4 |
C1 |
C2 |
H3 |
118.3 |
240.0 |
| H5 |
C2 |
C1 |
H6 |
118.8 |
240.0 |
| H4 |
C1 |
C2 |
CA |
100.5 |
300.0 |
| P |
C1 |
H4 |
H3 |
117.5 |
239.9 |
| C2 |
C1 |
H4 |
H3 |
242.6 |
119.9 |
| H4 |
C1 |
C2 |
H5 |
339.9 |
60.0 |
| H4 |
C1 |
C2 |
H6 |
221.1 |
180.0 |
| H3 |
C1 |
C2 |
CA |
342.2 |
60.0 |
| P |
C1 |
H3 |
H4 |
242.5 |
120.0 |
| C2 |
C1 |
H3 |
H4 |
117.4 |
240.1 |
| H3 |
C1 |
C2 |
H5 |
221.6 |
180.0 |
| H3 |
C1 |
C2 |
H6 |
102.8 |
299.9 |
| HA |
CA |
C |
OXT |
217.6 |
40.0 |
| C2 |
CA |
HA |
N |
234.4 |
240.0 |
| HA |
CA |
N |
H |
296.3 |
180.0 |
| HA |
CA |
N |
H2 |
56.3 |
303.9 |
| HA |
CA |
C2 |
H5 |
164.2 |
295.0 |
| HA |
CA |
C2 |
H6 |
283.1 |
175.1 |
| H5 |
C2 |
CA |
N |
41.8 |
175.0 |
| C1 |
C2 |
H5 |
CA |
123.7 |
240.0 |
| H5 |
C2 |
CA |
HA |
164.2 |
295.0 |
| CA |
C2 |
H5 |
H6 |
118.2 |
240.1 |
| H5 |
C2 |
C1 |
H4 |
339.9 |
60.0 |
| H5 |
C2 |
C1 |
H3 |
221.6 |
180.0 |
| C1 |
C2 |
H5 |
H6 |
241.9 |
120.0 |
| H6 |
C2 |
CA |
N |
160.7 |
55.1 |
| C1 |
C2 |
H6 |
CA |
236.4 |
120.1 |
| H6 |
C2 |
CA |
HA |
283.1 |
175.1 |
| CA |
C2 |
H6 |
H5 |
241.8 |
119.9 |
| H6 |
C2 |
C1 |
H4 |
221.1 |
180.0 |
| H6 |
C2 |
C1 |
H3 |
102.8 |
299.9 |
| C1 |
C2 |
H6 |
H5 |
118.1 |
240.0 |
| H |
N |
CA |
HA |
296.3 |
180.0 |
| CA |
N |
H |
H2 |
120.0 |
123.9 |
| H2 |
N |
CA |
HA |
56.3 |
303.9 |
| CA |
N |
H2 |
H |
240.0 |
236.1 |