PDB Chemical Component E78

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for E78

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C16 C6 1.490 1.507
O24 C10 1.223 1.216
C6 C2 1.380 1.366
C6 C4 1.376 1.399
C13 C14 1.497 1.530
C13 C15 1.502 1.530
C10 C4 1.459 1.473
C10 N22 1.381 1.344
C2 C3 1.384 1.399
C4 C5 1.365 1.400
C14 C15 1.503 1.530
C20 N22 1.447 1.465
C20 C15 1.490 1.530
C20 C19 1.512 1.529
N22 C12 1.449 1.468
O25 C11 1.221 1.213
C5 C12 1.482 1.509
C5 C1 1.374 1.361
C3 C1 1.381 1.400
C3 C7 1.451 1.475
S26 C7 1.720 1.762
S26 C9 1.719 1.710
C7 C8 1.382 1.351
C11 C18 1.494 1.507
C11 N23 1.373 1.347
C9 N23 1.383 1.387
C9 N21 1.311 1.299
C8 N21 1.372 1.315
C8 C17 1.472 1.506
C1 H1 1.080 1.080
C2 H2 1.080 1.080
C12 H3 1.100 1.090
C12 H4 1.100 1.090
C13 H5 1.100 1.090
C13 H6 1.100 1.090
C14 H7 1.100 1.090
C14 H8 1.100 1.089
C15 H9 1.100 1.090
C16 H10 1.100 1.091
C16 H11 1.100 1.090
C16 H12 1.100 1.090
C19 H13 1.100 1.090
C19 H14 1.100 1.090
C19 H15 1.100 1.090
C20 H16 1.100 1.091
N23 H17 1.000 0.970
C17 H18 1.100 1.090
C17 H19 1.100 1.091
C17 H20 1.100 1.090
C18 H21 1.100 1.090
C18 H22 1.100 1.091
C18 H23 1.100 1.090

Bond Angles for E78

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C16 C6 C4 123.4 120.0
C6 C16 H10 109.5 109.5
C6 C16 H11 109.5 109.5
C6 C16 H12 109.5 109.5
C6 C2 H2 118.9 119.9
C14 C13 C15 60.1 60.0
C13 C14 C15 60.1 60.0
C14 C13 H5 120.0 117.5
C14 C13 H6 120.0 117.5
C13 C14 H7 120.0 117.5
C13 C14 H8 120.0 117.5
C13 C15 C14 59.8 60.0
C15 C13 H5 120.0 117.5
C15 C13 H6 120.0 117.5
C13 C15 H9 116.1 117.5
C4 C10 N22 105.2 110.4
C10 C4 C5 108.4 108.3
C10 N22 C20 122.1 125.6
C10 N22 C12 114.2 108.8
C2 C3 C7 120.2 120.0
C3 C2 H2 118.9 120.0
C15 C14 H7 120.0 117.5
C15 C14 H8 120.0 117.5
C14 C15 H9 116.1 117.5
N22 C20 H16 108.0 109.5
C20 C15 H9 116.3 115.6
C20 C19 H13 109.5 109.5
C20 C19 H14 109.5 109.5
C20 C19 H15 109.5 109.5
N22 C12 H3 111.7 110.1
N22 C12 H4 111.7 110.2
C5 C12 H3 111.7 110.1
C5 C12 H4 111.7 110.1
C5 C1 H1 120.7 120.1
C3 C1 H1 120.7 120.1
C3 C7 C8 130.0 126.0
C7 C8 N21 115.9 114.3
C7 C8 C17 127.3 122.9
N23 C11 C18 110.7 120.0
C11 C18 H21 109.5 109.5
C11 C18 H22 109.5 109.5
C11 C18 H23 109.4 109.5
C9 N23 C11 123.1 120.0
C11 N23 H17 118.5 120.0
N23 C9 N21 124.0 124.8
C9 N23 H17 118.5 120.0
C8 N21 C9 110.2 117.1
C17 C8 N21 116.8 122.8
C8 C17 H18 109.5 109.5
C8 C17 H19 109.5 109.5
C8 C17 H20 109.5 109.5
H3 C12 H4 109.4 110.1
H5 C13 H6 109.5 115.5
H7 C14 H8 109.5 115.5
H10 C16 H11 109.5 109.5
H10 C16 H12 109.4 109.4
H11 C16 H12 109.5 109.5
H13 C19 H14 109.5 109.4
H13 C19 H15 109.5 109.4
H14 C19 H15 109.5 109.5
H18 C17 H19 109.4 109.5
H18 C17 H20 109.4 109.4
H19 C17 H20 109.5 109.5
H21 C18 H22 109.5 109.4
H21 C18 H23 109.5 109.5
H22 C18 H23 109.5 109.4

Torsion Angles for E78

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C16 C6 C2 H2 359.8 0.0
H10 C16 C6 H11 240.0 240.0
H10 C16 C6 H12 120.0 120.0
H11 C16 C6 H12 240.0 239.9
C3 C2 C6 H2 180.0 179.9
C4 C6 C16 H10 269.7 270.3
C4 C6 C16 H11 29.7 30.3
C4 C6 C16 H12 149.8 150.3
C4 C6 C2 H2 180.3 179.7
C6 C4 C10 N22 179.6 180.0
C14 C13 C15 C14 -0.0 -0.0
C15 C13 C14 H5 250.5 252.5
C15 C13 C14 H6 109.5 107.5
C14 C13 C15 H9 253.7 252.5
C15 C14 C13 H7 250.5 252.5
C15 C14 C13 H8 109.5 107.5
C13 C14 C15 H9 106.3 107.5
H5 C13 C14 H6 219.0 215.0
H7 C14 C13 H8 219.0 215.0
C15 C13 C14 C15 -0.0 360.0
C14 C13 C15 H5 109.5 107.5
C14 C13 C15 H6 250.5 252.5
C15 C13 C14 H7 109.5 107.5
C15 C13 C14 H8 250.5 252.5
C13 C15 C14 H7 250.5 252.6
C13 C15 C14 H8 109.5 107.5
C14 C15 C13 H9 106.3 107.5
C20 C15 C13 H9 216.5 214.9
H5 C13 C15 H6 141.0 145.0
C16 C6 C4 C10 0.0 0.1
C4 C10 N22 C20 170.2 179.9
C4 C10 N22 C12 1.0 0.0
N22 C10 C4 C5 359.3 0.0
C10 N22 C20 H16 8.1 180.0
C10 N22 C12 H3 117.6 240.8
C10 N22 C12 H4 240.5 119.2
C6 C2 C3 H2 180.0 180.1
C2 C3 C1 H1 179.9 180.0
C2 C3 C7 C8 151.2 132.4
C16 C6 C4 C5 180.3 180.0
C5 C4 C10 N22 359.3 0.0
C4 C5 C12 H3 241.9 119.2
C4 C5 C12 H4 119.0 240.8
C4 C5 C1 H1 180.2 179.9
C15 C14 C13 C15 -0.0 360.0
C15 C14 C13 H5 109.5 107.5
C15 C14 C13 H6 250.5 252.5
C13 C14 C15 H7 109.5 107.4
C13 C14 C15 H8 250.5 252.5
C14 C15 C13 H5 250.5 252.5
C14 C15 C13 H6 109.5 107.5
C13 C15 C14 H9 253.7 252.5
C20 C15 C14 H9 147.8 145.0
H7 C14 C15 H8 141.1 145.0
C10 N22 C20 C12 191.8 180.1
N22 C20 C15 H9 309.0 34.3
N22 C20 C19 H13 180.0 300.0
N22 C20 C19 H14 300.0 60.0
N22 C20 C19 H15 60.0 180.0
C20 N22 C12 H3 308.5 60.8
C20 N22 C12 H4 71.5 299.3
C20 C15 C13 H5 0.7 359.9
C20 C15 C13 H6 219.7 214.9
C13 C15 C20 H9 143.4 145.7
C10 N22 C20 C15 250.2 60.1
C20 C15 C14 H7 144.6 145.0
C20 C15 C14 H8 3.6 0.0
C14 C15 C20 H9 212.3 214.3
C10 N22 C20 C19 125.1 300.1
C19 C20 C15 H9 73.4 154.3
H13 C19 C20 H14 240.0 240.0
H13 C19 C20 H15 120.0 120.0
H14 C19 C20 H15 240.0 240.0
C10 N22 C12 C20 169.1 179.9
C5 C12 N22 H3 241.5 119.2
C5 C12 N22 H4 118.5 240.8
H3 C12 N22 H4 237.0 121.6
O25 C11 C18 H21 360.0 270.1
O25 C11 C18 H22 120.0 30.0
O25 C11 C18 H23 240.0 150.0
O25 C11 N23 H17 186.1 180.0
C10 C4 C5 C12 0.1 360.0
C10 N22 C12 C5 359.0 360.0
N22 C12 C5 H3 118.5 240.8
N22 C12 C5 H4 241.5 119.2
C12 C5 C1 H1 0.3 0.0
H3 C12 C5 H4 122.9 238.4
C3 C1 C5 H1 180.0 179.7
C5 C1 C3 H1 180.0 180.3
C7 C3 C2 H2 1.6 360.0
C7 C3 C1 H1 358.1 0.0
C3 C7 C8 N21 181.1 179.9
C3 C7 C8 C17 1.2 360.0
S26 C9 N23 H17 178.3 0.3
C7 C8 N21 C9 0.2 0.1
C17 C8 C7 N21 180.1 180.1
C7 C8 C17 H18 179.9 84.7
C7 C8 C17 H19 299.9 204.7
C7 C8 C17 H20 59.9 324.8
C9 N23 C11 C18 185.5 180.0
C18 C11 N23 H17 5.5 0.0
H21 C18 C11 H22 240.0 240.0
H21 C18 C11 H23 120.0 120.0
H22 C18 C11 H23 240.0 240.0
N23 C11 C18 H21 180.5 90.0
N23 C11 C18 H22 300.6 210.0
N23 C11 C18 H23 60.5 330.0
C11 N23 C9 N21 178.3 360.0
C9 N23 C11 H17 180.0 180.0
C11 N23 C9 H17 180.0 180.0
C8 N21 C9 N23 179.9 180.0
N21 C9 N23 C11 178.3 360.0
N21 C9 N23 H17 358.3 180.0
C17 C8 N21 C9 180.1 180.0
C7 C8 N21 C17 180.1 180.1
N23 C9 N21 C8 179.9 180.0
N21 C8 C17 H18 360.0 264.8
N21 C8 C17 H19 120.0 24.8
N21 C8 C17 H20 240.0 144.8
C7 C8 C17 N21 179.9 179.9
H18 C17 C8 H19 240.0 240.0
H18 C17 C8 H20 120.0 120.0
H19 C17 C8 H20 240.0 240.0
H2 C2 C3 C7 1.6 360.0
N22 C12 H3 H4 124.3 238.4
C5 C12 H3 H4 235.8 121.6
N22 C12 H4 H3 235.7 121.6
C5 C12 H4 H3 124.2 238.4
C14 C13 H5 C15 289.3 291.4
H5 C13 C14 C15 109.5 107.5
C14 C13 H5 H6 144.7 145.7
H5 C13 C14 H7 219.0 215.0
H5 C13 C14 H8 0.0 360.0
H5 C13 C15 C14 250.5 252.5
C15 C13 H5 H6 215.3 214.3
H5 C13 C15 H9 144.2 145.0
C14 C13 H6 C15 70.7 68.7
H6 C13 C14 C15 250.5 252.5
C14 C13 H6 H5 215.3 214.3
H6 C13 C14 H7 360.0 360.0
H6 C13 C14 H8 141.0 145.0
H6 C13 C15 C14 109.5 107.5
C15 C13 H6 H5 144.6 145.7
H6 C13 C15 H9 3.2 0.0
H7 C14 C13 C15 109.5 107.5
C13 C14 H7 C15 289.4 291.4
H7 C14 C13 H5 219.0 215.0
H7 C14 C13 H6 360.0 360.0
C13 C14 H7 H8 144.7 145.7
C15 C14 H7 H8 215.3 214.3
H7 C14 C15 H9 356.8 0.0
H8 C14 C13 C15 250.5 252.5
C13 C14 H8 C15 70.6 68.6
H8 C14 C13 H5 0.0 360.0
H8 C14 C13 H6 141.0 145.0
C13 C14 H8 H7 215.3 214.3
C15 C14 H8 H7 144.7 145.7
H8 C14 C15 H9 215.8 215.0
C13 C15 H9 C14 67.4 68.6
H9 C15 C13 H5 144.2 145.0
H9 C15 C13 H6 3.2 0.0
H9 C15 C14 H7 356.8 0.0
H9 C15 C14 H8 215.8 215.0
H10 C16 C6 C4 269.7 270.3
C6 C16 H10 H11 120.0 120.0
C6 C16 H10 H12 240.0 240.0
H11 C16 H10 H12 120.0 120.0
H11 C16 C6 C4 29.7 30.3
C6 C16 H11 H10 240.0 240.0
C6 C16 H11 H12 120.0 120.0
H10 C16 H11 H12 240.0 240.0
H12 C16 C6 C4 149.8 150.3
C6 C16 H12 H10 120.0 120.0
C6 C16 H12 H11 240.0 240.0
H10 C16 H12 H11 120.0 120.0
C20 C19 H13 H14 120.0 120.0
C20 C19 H13 H15 240.0 240.0
H14 C19 H13 H15 120.0 120.0
C20 C19 H14 H13 240.0 240.0
C20 C19 H14 H15 120.0 120.1
H13 C19 H14 H15 240.0 240.1
C20 C19 H15 H13 120.1 120.0
C20 C19 H15 H14 240.0 240.0
H13 C19 H15 H14 120.0 119.9
H16 C20 C15 H9 190.9 274.3
H16 C20 C19 H13 297.6 60.0
H16 C20 C19 H14 57.6 180.0
H16 C20 C19 H15 177.5 300.0
H17 N23 C11 C18 5.5 0.0
C9 N23 H17 C11 180.0 180.0
H17 N23 C9 N21 358.3 180.0
H18 C17 C8 N21 360.0 264.8
C8 C17 H18 H19 120.0 120.0
C8 C17 H18 H20 240.0 240.0
H19 C17 H18 H20 120.0 120.0
H19 C17 C8 N21 120.0 24.8
C8 C17 H19 H18 240.0 239.9
C8 C17 H19 H20 120.0 120.0
H18 C17 H19 H20 240.0 240.1
H20 C17 C8 N21 240.0 144.8
C8 C17 H20 H18 120.0 120.0
C8 C17 H20 H19 240.0 240.0
H18 C17 H20 H19 120.0 120.0
C11 C18 H21 H22 120.0 120.0
C11 C18 H21 H23 240.0 240.0
H22 C18 H21 H23 120.0 119.9
C11 C18 H22 H21 240.0 240.0
C11 C18 H22 H23 120.0 120.0
H21 C18 H22 H23 240.0 240.0
C11 C18 H23 H21 120.0 120.1
C11 C18 H23 H22 240.0 240.0
H21 C18 H23 H22 120.0 119.9