PDB Chemical Component E49
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for E49
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N1 |
C6 |
1.354 |
1.322 |
| N1 |
C2 |
1.319 |
1.326 |
| C2 |
N3 |
1.335 |
1.325 |
| N3 |
C4 |
1.344 |
1.322 |
| C4 |
C11 |
1.555 |
1.508 |
| C5 |
C4 |
1.385 |
1.387 |
| C6 |
C5 |
1.401 |
1.386 |
| S7 |
C2 |
1.748 |
1.763 |
| S7 |
C8 |
1.850 |
1.810 |
| C8 |
C9 |
1.531 |
1.507 |
| C9 |
C13 |
1.504 |
1.471 |
| O10 |
C9 |
1.280 |
1.213 |
| C12 |
C6 |
1.452 |
1.507 |
| C13 |
C18 |
1.418 |
1.400 |
| C13 |
C14 |
1.370 |
1.399 |
| C14 |
C15 |
1.328 |
1.378 |
| C15 |
C16 |
1.370 |
1.386 |
| C15 |
S19 |
1.812 |
1.761 |
| C17 |
C16 |
1.415 |
1.386 |
| C18 |
C17 |
1.311 |
1.378 |
| S19 |
O20 |
1.505 |
1.422 |
| S19 |
O22 |
1.415 |
1.421 |
| N23 |
S19 |
1.621 |
1.656 |
| C5 |
H5 |
1.080 |
1.080 |
| C8 |
H8 |
1.100 |
1.090 |
| C8 |
H8A |
1.100 |
1.090 |
| C11 |
H11 |
1.099 |
1.090 |
| C11 |
H11A |
1.100 |
1.090 |
| C11 |
H11B |
1.100 |
1.091 |
| C12 |
H12 |
1.100 |
1.090 |
| C12 |
H12A |
1.101 |
1.090 |
| C12 |
H12B |
1.100 |
1.090 |
| C14 |
H14 |
1.079 |
1.081 |
| C17 |
H17 |
1.080 |
1.080 |
| C18 |
H18 |
1.080 |
1.080 |
| N23 |
HN23 |
1.000 |
0.969 |
| N23 |
HN2A |
1.000 |
0.971 |
| C16 |
CL21 |
1.770 |
1.736 |
Bond Angles for E49
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C2 |
N1 |
C6 |
119.3 |
120.7 |
| N1 |
C6 |
C5 |
118.5 |
119.2 |
| N1 |
C2 |
N3 |
122.6 |
121.5 |
| C2 |
N3 |
C4 |
122.1 |
120.8 |
| N3 |
C4 |
C11 |
122.3 |
120.4 |
| C5 |
C4 |
C11 |
121.4 |
120.3 |
| C4 |
C11 |
H11 |
109.5 |
109.4 |
| C4 |
C11 |
H11A |
109.4 |
109.5 |
| C4 |
C11 |
H11B |
109.4 |
109.4 |
| C6 |
C5 |
H5 |
119.5 |
120.8 |
| S7 |
C8 |
C9 |
110.9 |
109.4 |
| S7 |
C8 |
H8 |
109.0 |
109.5 |
| S7 |
C8 |
H8A |
109.0 |
109.5 |
| C8 |
C9 |
C13 |
118.4 |
120.0 |
| C9 |
C8 |
H8 |
109.0 |
109.5 |
| C9 |
C8 |
H8A |
109.0 |
109.5 |
| O10 |
C9 |
C13 |
121.3 |
120.0 |
| C9 |
C13 |
C18 |
119.8 |
120.2 |
| C9 |
C13 |
C14 |
124.1 |
120.2 |
| C14 |
C13 |
C18 |
115.4 |
119.6 |
| C13 |
C18 |
C17 |
125.3 |
119.9 |
| C13 |
C18 |
H18 |
117.3 |
120.0 |
| C13 |
C14 |
C15 |
121.6 |
119.9 |
| C13 |
C14 |
H14 |
119.2 |
120.0 |
| C14 |
C15 |
C16 |
119.5 |
120.1 |
| C14 |
C15 |
S19 |
118.6 |
119.9 |
| C15 |
C14 |
H14 |
119.2 |
120.1 |
| C16 |
C15 |
S19 |
120.8 |
119.9 |
| C15 |
C16 |
CL21 |
133.9 |
119.8 |
| C15 |
S19 |
O20 |
102.4 |
106.4 |
| C15 |
S19 |
O22 |
109.0 |
106.4 |
| C17 |
C16 |
CL21 |
104.5 |
119.9 |
| C18 |
C17 |
H17 |
123.1 |
119.9 |
| O20 |
S19 |
O22 |
114.1 |
123.1 |
| H8 |
C8 |
H8A |
109.9 |
109.5 |
| H11 |
C11 |
H11A |
109.5 |
109.6 |
| H11 |
C11 |
H11B |
109.5 |
109.5 |
| H11A |
C11 |
H11B |
109.5 |
109.5 |
| H12 |
C12 |
H12A |
109.4 |
109.5 |
| H12 |
C12 |
H12B |
109.5 |
109.5 |
| H12A |
C12 |
H12B |
109.5 |
109.4 |
| HN23 |
N23 |
HN2A |
109.5 |
120.0 |
Torsion Angles for E49
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C6 |
N1 |
C2 |
N3 |
355.9 |
0.0 |
| N1 |
C6 |
C5 |
H5 |
182.7 |
180.1 |
| C2 |
N1 |
C6 |
C5 |
359.9 |
359.9 |
| N1 |
C2 |
N3 |
C4 |
5.9 |
0.0 |
| N3 |
C2 |
N1 |
C6 |
355.9 |
0.0 |
| C2 |
N3 |
C4 |
C11 |
174.3 |
180.0 |
| C5 |
C4 |
N3 |
C11 |
182.7 |
180.0 |
| N3 |
C4 |
C11 |
H11 |
0.0 |
89.9 |
| N3 |
C4 |
C11 |
H11A |
120.0 |
210.0 |
| N3 |
C4 |
C11 |
H11B |
240.0 |
329.9 |
| H11 |
C11 |
C4 |
H11A |
240.0 |
239.9 |
| H11 |
C11 |
C4 |
H11B |
120.0 |
120.0 |
| H11A |
C11 |
C4 |
H11B |
240.0 |
240.0 |
| N1 |
C6 |
C5 |
C4 |
2.7 |
0.1 |
| N3 |
C4 |
C5 |
C11 |
177.4 |
180.0 |
| C5 |
C4 |
C11 |
H11 |
177.2 |
269.9 |
| C5 |
C4 |
C11 |
H11A |
297.2 |
30.0 |
| C5 |
C4 |
C11 |
H11B |
57.2 |
150.0 |
| C6 |
C5 |
C4 |
C11 |
181.5 |
180.0 |
| S7 |
C8 |
C9 |
C13 |
209.7 |
180.0 |
| C9 |
C8 |
S7 |
H8 |
240.0 |
240.1 |
| C9 |
C8 |
S7 |
H8A |
120.0 |
120.0 |
| H8 |
C8 |
S7 |
H8A |
240.0 |
239.9 |
| S7 |
C8 |
C9 |
H8 |
120.0 |
120.0 |
| S7 |
C8 |
C9 |
H8A |
240.0 |
240.0 |
| O10 |
C9 |
C8 |
C13 |
182.5 |
180.0 |
| C8 |
C9 |
C13 |
C18 |
151.5 |
360.0 |
| C8 |
C9 |
C13 |
C14 |
321.8 |
180.3 |
| H8 |
C8 |
C9 |
H8A |
120.0 |
120.1 |
| C13 |
C9 |
C8 |
H8 |
89.7 |
60.0 |
| C13 |
C9 |
C8 |
H8A |
329.7 |
300.0 |
| C14 |
C13 |
C9 |
C18 |
170.3 |
180.3 |
| C9 |
C13 |
C18 |
C17 |
183.6 |
179.8 |
| C9 |
C13 |
C18 |
H18 |
3.6 |
0.0 |
| C9 |
C13 |
C14 |
C15 |
181.6 |
180.0 |
| C9 |
C13 |
C14 |
H14 |
1.6 |
359.9 |
| C8 |
C9 |
O10 |
C13 |
177.4 |
180.0 |
| O10 |
C9 |
C8 |
H8 |
272.2 |
240.0 |
| O10 |
C9 |
C8 |
H8A |
152.2 |
120.0 |
| O10 |
C9 |
C13 |
C18 |
328.9 |
180.0 |
| O10 |
C9 |
C13 |
C14 |
139.2 |
0.3 |
| C12 |
C6 |
C5 |
H5 |
4.0 |
360.0 |
| C9 |
C13 |
C18 |
C14 |
171.1 |
180.3 |
| C18 |
C13 |
C14 |
C15 |
352.3 |
0.3 |
| C18 |
C13 |
C14 |
H14 |
172.3 |
180.2 |
| C13 |
C18 |
C17 |
H17 |
163.3 |
180.3 |
| C9 |
C13 |
C14 |
C18 |
189.3 |
179.7 |
| C14 |
C13 |
C18 |
C17 |
12.5 |
359.5 |
| C14 |
C13 |
C18 |
H18 |
192.5 |
179.7 |
| C13 |
C14 |
C15 |
C16 |
9.2 |
360.0 |
| C13 |
C14 |
C15 |
S19 |
177.0 |
180.0 |
| C15 |
C14 |
C13 |
H14 |
180.0 |
180.1 |
| C15 |
C14 |
C13 |
C18 |
352.3 |
0.3 |
| C13 |
C14 |
C15 |
H14 |
180.0 |
179.9 |
| C16 |
C15 |
C14 |
S19 |
192.1 |
180.0 |
| C14 |
C15 |
C16 |
CL21 |
165.6 |
180.0 |
| C14 |
C15 |
S19 |
O20 |
246.2 |
228.5 |
| C14 |
C15 |
S19 |
O22 |
125.0 |
1.4 |
| C14 |
C15 |
C16 |
S19 |
167.6 |
180.0 |
| C16 |
C15 |
C14 |
H14 |
189.2 |
180.1 |
| C16 |
C15 |
S19 |
O20 |
53.9 |
48.5 |
| C16 |
C15 |
S19 |
O22 |
292.8 |
181.4 |
| C17 |
C16 |
C15 |
CL21 |
180.4 |
179.9 |
| C14 |
C15 |
S19 |
C16 |
192.3 |
180.0 |
| S19 |
C15 |
C14 |
H14 |
357.0 |
0.0 |
| S19 |
C15 |
C16 |
CL21 |
358.0 |
0.1 |
| O20 |
S19 |
C15 |
O22 |
121.2 |
227.1 |
| C13 |
C18 |
C17 |
C16 |
343.3 |
0.5 |
| C17 |
C16 |
C15 |
S19 |
178.4 |
180.0 |
| C15 |
C16 |
C17 |
CL21 |
179.7 |
180.1 |
| C13 |
C18 |
C17 |
H18 |
180.0 |
180.2 |
| C18 |
C17 |
C16 |
CL21 |
197.4 |
179.7 |
| C15 |
S19 |
O20 |
O22 |
242.3 |
123.0 |
| C15 |
S19 |
O22 |
O20 |
113.8 |
237.0 |
| H5 |
C5 |
C4 |
C11 |
1.5 |
360.0 |
| S7 |
C8 |
H8 |
C9 |
238.8 |
240.1 |
| S7 |
C8 |
H8 |
H8A |
119.4 |
120.0 |
| H8 |
C8 |
C9 |
C13 |
89.7 |
60.0 |
| C9 |
C8 |
H8 |
H8A |
240.5 |
239.9 |
| S7 |
C8 |
H8A |
C9 |
121.2 |
119.9 |
| S7 |
C8 |
H8A |
H8 |
240.6 |
240.0 |
| H8A |
C8 |
C9 |
C13 |
329.7 |
300.0 |
| C9 |
C8 |
H8A |
H8 |
119.5 |
120.0 |
| C4 |
C11 |
H11 |
H11A |
120.0 |
120.0 |
| C4 |
C11 |
H11 |
H11B |
240.0 |
240.1 |
| H11A |
C11 |
H11 |
H11B |
120.0 |
120.1 |
| C4 |
C11 |
H11A |
H11 |
240.0 |
240.0 |
| C4 |
C11 |
H11A |
H11B |
120.0 |
119.9 |
| H11 |
C11 |
H11A |
H11B |
240.0 |
239.9 |
| C4 |
C11 |
H11B |
H11 |
120.0 |
119.9 |
| C4 |
C11 |
H11B |
H11A |
240.1 |
240.1 |
| H11 |
C11 |
H11B |
H11A |
120.0 |
120.1 |
| H12A |
C12 |
H12 |
H12B |
120.0 |
120.0 |
| H12 |
C12 |
H12A |
H12B |
240.0 |
240.0 |
| H12 |
C12 |
H12B |
H12A |
120.0 |
120.0 |
| H14 |
C14 |
C13 |
C18 |
172.3 |
180.2 |
| C13 |
C14 |
H14 |
C15 |
180.0 |
180.1 |
| H14 |
C14 |
C15 |
C16 |
189.2 |
180.1 |
| H14 |
C14 |
C15 |
S19 |
357.0 |
0.0 |
| H17 |
C17 |
C16 |
CL21 |
17.4 |
359.9 |
| C13 |
C18 |
H18 |
C17 |
180.0 |
179.8 |
| H18 |
C18 |
C17 |
H17 |
343.3 |
0.0 |
| CL21 |
C16 |
C15 |
S19 |
358.0 |
0.1 |