PDB Chemical Component E3P

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for E3P

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C2	C1	1.500	1.507
C1	O6	1.258	1.208
C1	O7	1.262	1.342
C6	N1	1.439	1.348
C4	N1	1.451	1.465
N1	HN1	1.000	0.970
C3	C2	1.498	1.529
C2	H2	1.100	1.090
C2	H2A	1.100	1.090
O2	C6	1.214	1.213
C4	C3	1.519	1.529
C3	H3	1.100	1.090
C3	H3A	1.100	1.090
N3	C5	1.305	1.349
N3	HN3	1.000	0.970
N3	HN3A	1.000	0.969
C5	C4	1.495	1.507
C4	H4	1.100	1.091
C5	O5	1.229	1.213
C6	C7	1.517	1.506
C7	C8	1.511	1.530
C7	H7	1.100	1.090
C7	H7A	1.100	1.091
O7	HO7	0.950	0.967
C8	C9	1.508	1.507
C8	H8	1.100	1.090
C8	H8A	1.100	1.090
C10	C9	1.364	1.383
C9	C14	1.485	1.383
C10	C11	1.495	1.380
C10	H10	1.080	1.080
C11	C12	1.345	1.394
C11	H11	1.080	1.081
C12	C13	1.488	1.393
C12	C19	1.510	1.483
C14	C13	1.375	1.380
C13	H13	1.080	1.080
C14	H14	1.080	1.080
C36	C15	1.367	1.394
C15	C16	1.480	1.395
C15	C37	1.490	1.484
C17	C16	1.373	1.378
C16	H16	1.080	1.079
C19	C17	1.484	1.394
C17	H17	1.080	1.080
C35	C19	1.365	1.395
C35	C36	1.505	1.377
C35	H35	1.080	1.080
C36	H36	1.080	1.080
C38	C37	1.492	1.393
C37	C42	1.365	1.394
C38	C39	1.364	1.380
C38	H38	1.080	1.080
C39	C40	1.496	1.383
C39	H39	1.080	1.080
C40	C41	1.364	1.383
C40	H40	1.080	1.080
C42	C41	1.491	1.379
C41	H41	1.080	1.081
C42	H42	1.080	1.081

Bond Angles for E3P

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	O6	120.8	120.0
C2	C1	O7	120.2	120.0
O6	C1	O7	119.0	120.0
C1	O7	HO7	109.5	117.0
C6	N1	HN1	119.9	119.9
C4	N1	HN1	119.9	120.0
C3	C2	H2	109.1	109.5
C3	C2	H2A	109.1	109.5
H2	C2	H2A	109.8	109.5
O2	C6	C7	120.4	120.0
C4	C3	H3	108.8	109.5
C4	C3	H3A	108.8	109.4
H3	C3	H3A	110.1	109.4
C5	N3	HN3	120.0	119.9
C5	N3	HN3A	120.0	120.0
N3	C5	C4	120.1	120.0
N3	C5	O5	119.3	120.0
HN3	N3	HN3A	120.0	120.1
C5	C4	H4	109.0	109.5
C6	C7	C8	104.5	109.4
C6	C7	H7	111.1	109.5
C6	C7	H7A	111.1	109.5
C8	C7	H7	111.2	109.5
C8	C7	H7A	111.2	109.4
C7	C8	C9	108.9	109.5
C7	C8	H8	109.6	109.5
C7	C8	H8A	109.7	109.5
H7	C7	H7A	107.7	109.5
C9	C8	H8	109.7	109.4
C9	C8	H8A	109.7	109.4
C8	C9	C14	121.3	119.9
H8	C8	H8A	109.3	109.5
C10	C9	C14	120.1	120.2
C9	C14	C13	118.8	120.1
C9	C14	H14	120.6	119.9
C11	C10	H10	119.6	119.9
C10	C11	C12	119.2	119.9
C10	C11	H11	120.4	120.1
C12	C11	H11	120.4	120.0
C11	C12	C13	120.6	119.7
C11	C12	C19	118.7	120.1
C13	C12	C19	120.7	120.2
C12	C13	H13	119.7	120.0
C12	C19	C17	118.4	120.0
C14	C13	H13	119.7	120.1
C36	C15	C37	121.0	120.0
C16	C15	C37	117.9	119.9
C15	C16	H16	120.0	120.1
C15	C37	C42	117.4	120.1
C17	C16	H16	120.0	120.0
C19	C17	H17	120.2	120.0
C36	C35	H35	120.1	120.0
C35	C36	H36	120.5	120.0
C38	C37	C42	121.4	119.8
C37	C42	C41	119.6	119.9
C37	C42	H42	120.2	120.1
C39	C38	H38	120.6	120.0
C38	C39	C40	120.0	120.1
C38	C39	H39	120.0	120.0
C40	C39	H39	120.0	119.9
C39	C40	C41	120.9	120.2
C39	C40	H40	119.5	119.9
C41	C40	H40	119.5	119.9
C40	C41	H41	120.4	119.9
C42	C41	H41	120.4	120.0

Torsion Angles for E3P

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O6	C1	C2	O7	179.5	180.3
C2	C1	O7	HO7	179.5	180.3
C2	C1	O6	O7	180.5	179.7
O6	C1	O7	HO7	360.0	0.0
C2	C1	O7	O6	179.5	180.3
C4	N1	C6	HN1	180.0	179.9
C6	N1	C4	HN1	180.0	180.1
C3	C2	C1	O6	193.6	360.0
C3	C2	C1	O7	14.1	179.7
H2	C2	C3	H2A	120.0	120.0
H2	C2	C1	O6	313.6	120.0
H2	C2	C1	O7	134.1	299.7
C3	C2	H2	H2A	240.5	239.9
H2A	C2	C1	O6	73.6	240.0
H2A	C2	C1	O7	254.1	59.7
C3	C2	H2A	H2	119.5	120.0
O2	C6	N1	HN1	179.6	180.1
O2	C6	C7	C8	275.7	360.0
O2	C6	C7	H7	35.7	120.0
O2	C6	C7	H7A	155.7	240.0
C3	C4	N1	HN1	306.5	334.9
C4	C3	C2	H2	332.0	60.0
C4	C3	C2	H2A	212.1	300.0
H3	C3	C4	H3A	120.0	119.9
H3	C3	C2	H2	92.0	180.0
H3	C3	C2	H2A	332.0	60.0
C4	C3	H3	H3A	240.8	240.1
H3A	C3	C2	H2	212.0	300.0
H3A	C3	C2	H2A	92.0	180.0
C4	C3	H3A	H3	119.2	119.9
HN3	N3	C5	HN3A	180.0	180.0
N3	C5	C4	H4	273.7	60.0
C5	N3	HN3	HN3A	180.0	180.0
HN3	N3	C5	C4	179.8	360.0
HN3	N3	C5	O5	360.0	180.0
C5	N3	HN3A	HN3	180.0	180.0
HN3A	N3	C5	C4	359.8	180.0
HN3A	N3	C5	O5	180.0	360.0
C5	C4	N1	HN1	68.2	95.0
C5	C4	C3	H3	50.1	54.9
C5	C4	C3	H3A	290.1	295.0
C4	C5	N3	HN3	179.8	360.0
C4	C5	N3	HN3A	359.8	180.0
N3	C5	C4	O5	180.2	180.0
H4	C4	N1	HN1	187.6	215.0
H4	C4	C3	H3	290.7	294.9
H4	C4	C3	H3A	170.7	175.0
O5	C5	N3	HN3	360.0	180.0
O5	C5	N3	HN3A	180.0	360.0
N3	C5	O5	C4	179.8	180.0
O5	C5	C4	H4	93.5	240.0
C7	C6	N1	HN1	1.3	0.1
C8	C7	C6	H7	240.0	240.0
C8	C7	C6	H7A	120.0	119.9
C6	C7	C8	C9	191.2	180.0
C6	C7	C8	H8	311.2	300.0
C6	C7	C8	H8A	71.2	60.0
H7	C7	C6	H7A	240.0	239.9
C6	C7	C8	H7	120.0	120.0
C6	C7	C8	H7A	240.0	240.0
H7	C7	C8	H7A	120.0	120.0
C9	C8	C7	H8	240.0	240.0
C9	C8	C7	H8A	120.0	120.0
C7	C8	C9	C14	65.3	89.9
H8	C8	C7	H8A	240.0	240.0
C6	C7	H7	C8	244.0	240.0
C6	C7	H7	H7A	122.0	120.1
C8	C7	H7	H7A	238.0	240.1
H7	C7	C8	C9	71.2	60.0
H7	C7	C8	H8	191.2	180.0
H7	C7	C8	H8A	311.2	300.0
C6	C7	H7A	C8	116.0	120.0
C6	C7	H7A	H7	238.0	239.9
C8	C7	H7A	H7	122.0	120.0
H7A	C7	C8	C9	311.2	300.0
H7A	C7	C8	H8	71.2	60.0
H7A	C7	C8	H8A	191.2	180.0
C9	C8	C7	H7	71.2	60.0
C9	C8	C7	H7A	311.2	300.0
C7	C8	C9	H8	120.0	120.0
C7	C8	C9	H8A	240.0	240.0
H8	C8	C9	H8A	120.0	119.9
C10	C9	C8	C14	180.0	180.4
C8	C9	C14	C13	180.1	179.8
C8	C9	C14	H14	0.1	0.2
H8	C8	C7	H7	191.2	180.0
H8	C8	C7	H7A	71.2	60.0
C7	C8	H8	C9	240.5	240.0
C7	C8	H8	H8A	120.2	120.0
C9	C8	H8	H8A	239.7	240.1
H8	C8	C9	C14	305.3	329.9
H8A	C8	C7	H7	311.2	300.0
H8A	C8	C7	H7A	191.2	180.0
C7	C8	H8A	C9	119.5	120.0
C7	C8	H8A	H8	239.8	240.0
C9	C8	H8A	H8	120.3	119.9
H8A	C8	C9	C14	185.3	210.0
C10	C9	C8	H8	125.4	150.3
C10	C9	C8	H8A	5.3	30.4
C8	C9	C10	C14	180.0	179.6
C10	C9	C14	C13	0.1	359.4
C10	C9	C14	H14	180.1	179.7
C14	C9	C8	H8	305.3	329.9
C14	C9	C8	H8A	185.3	210.0
C9	C14	C13	H13	180.2	180.3
C11	C10	C9	C14	0.4	0.4
C12	C11	C10	H11	180.0	180.0
C10	C11	C12	C13	1.5	360.0
C10	C11	C12	C19	180.3	180.0
H10	C10	C9	C14	180.4	180.3
H10	C10	C11	C12	178.7	180.1
H10	C10	C11	H11	358.7	0.1
C12	C11	C10	H10	178.7	180.1
C10	C11	C12	H11	180.0	180.0
C13	C12	C11	C19	181.3	180.0
C11	C12	C13	H13	179.0	180.0
C11	C12	C19	C17	189.7	180.0
H11	C11	C10	H10	358.7	0.1
C10	C11	H11	C12	180.0	180.0
H11	C11	C12	C13	181.5	180.0
H11	C11	C12	C19	0.3	0.0
C9	C14	C13	C12	0.2	0.6
C13	C12	C11	H11	181.5	180.0
C11	C12	C13	C19	178.7	180.0
C13	C12	C19	C17	8.4	360.0
C14	C13	C12	H13	180.0	179.8
C19	C12	C11	H11	0.3	0.0
C11	C12	C19	C13	181.3	180.0
C19	C12	C13	H13	0.3	360.0
C12	C19	C17	H17	359.6	0.0
C9	C14	C13	H14	180.0	180.4
C14	C13	C12	C19	180.3	179.7
C12	C13	C14	H13	180.0	180.2
H13	C13	C12	C19	0.3	360.0
C9	C14	H14	C13	180.0	179.6
H14	C14	C13	H13	0.2	360.0
C16	C15	C36	C37	182.3	179.7
C36	C15	C16	H16	179.2	180.2
C36	C15	C37	C42	213.6	359.7
C36	C15	C16	C37	177.8	180.3
C16	C15	C37	C42	31.4	180.0
C17	C16	C15	H16	180.0	180.0
C37	C15	C16	H16	1.4	359.9
C38	C37	C15	C42	177.7	180.3
C15	C37	C42	C41	178.8	179.7
C15	C37	C42	H42	358.7	0.0
C12	C19	C17	C16	179.6	180.0
C17	C16	C15	C37	181.4	180.0
C15	C16	C17	H16	180.0	180.0
H16	C16	C15	C37	1.4	359.9
C19	C17	C16	H16	180.1	180.0
H17	C17	C16	H16	0.1	360.0
C35	C19	C17	H17	180.1	180.0
C35	C36	C15	C37	178.9	179.8
H35	C35	C36	H36	359.0	359.8
H36	C36	C15	C37	358.9	0.2
H36	C36	C35	H35	359.0	359.8
C15	C37	C38	C42	182.4	179.7
C38	C37	C42	C41	1.0	359.4
C38	C37	C42	H42	181.0	179.8
C37	C42	C41	H41	179.8	180.3
C39	C38	C37	C42	358.7	0.2
C40	C39	C38	H39	180.0	180.0
C38	C39	C40	C41	0.0	0.0
C38	C39	C40	H40	180.0	180.0
H38	C38	C37	C42	178.7	180.2
H38	C38	C39	C40	180.7	180.0
H38	C38	C39	H39	0.7	0.0
C40	C39	C38	H38	180.7	180.0
C38	C39	C40	H39	180.0	180.0
C41	C40	C39	H40	180.0	180.0
C39	C40	C41	H41	179.7	180.0
H39	C39	C38	H38	0.7	0.0
C38	C39	H39	C40	180.0	180.0
H39	C39	C40	C41	180.0	180.0
H39	C39	C40	H40	0.0	0.0
C37	C42	C41	C40	359.7	0.6
C41	C40	C39	H39	180.0	180.0
C39	C40	C41	H40	180.0	180.0
C42	C41	C40	H41	180.0	179.7
H40	C40	C39	H39	0.0	0.0
C39	C40	H40	C41	180.0	180.0
H40	C40	C41	H41	359.7	0.0
C37	C42	C41	H42	180.0	180.3
C42	C41	C40	H40	179.7	179.7
C40	C41	C42	H41	180.0	180.3
H41	C41	C40	H40	359.7	0.0
C37	C42	H42	C41	180.0	179.7
H42	C42	C41	H41	359.8	359.9