PDB Chemical Component E37
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for E37
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
O4 |
C10 |
1.224 |
1.208 |
C10 |
C9 |
1.507 |
1.507 |
C10 |
O4E |
1.238 |
1.342 |
C9 |
C8 |
1.506 |
1.530 |
C8 |
C7 |
1.497 |
1.530 |
O1 |
C6 |
1.203 |
1.213 |
C7 |
C6 |
1.522 |
1.506 |
C7 |
N2 |
1.446 |
1.466 |
C6 |
N1 |
1.424 |
1.348 |
N2 |
C11 |
1.422 |
1.348 |
C11 |
O2 |
1.202 |
1.216 |
C11 |
C27 |
1.506 |
1.475 |
C28 |
C27 |
1.385 |
1.398 |
C28 |
C15 |
1.391 |
1.366 |
C27 |
C14 |
1.379 |
1.399 |
C15 |
C16 |
1.381 |
1.398 |
C14 |
C17 |
1.383 |
1.365 |
C16 |
C17 |
1.379 |
1.398 |
C16 |
C18 |
1.379 |
1.475 |
C19 |
C18 |
1.406 |
1.349 |
C19 |
C20 |
1.635 |
1.389 |
C18 |
S7 |
1.650 |
1.758 |
C25 |
C26 |
1.350 |
1.381 |
C25 |
C24 |
1.413 |
1.383 |
C26 |
C21 |
1.305 |
1.393 |
C20 |
C21 |
1.512 |
1.484 |
C20 |
C29 |
1.402 |
1.347 |
C21 |
C22 |
1.349 |
1.394 |
C24 |
C23 |
1.432 |
1.383 |
S7 |
C29 |
1.662 |
1.706 |
C22 |
C23 |
1.411 |
1.380 |
N1 |
H1 |
1.000 |
0.970 |
N1 |
H2 |
1.000 |
0.970 |
C7 |
H3 |
1.100 |
1.090 |
C8 |
H4 |
1.100 |
1.090 |
C8 |
H5 |
1.099 |
1.090 |
C9 |
H6 |
1.100 |
1.090 |
C9 |
H7 |
1.100 |
1.089 |
O4E |
H8 |
0.950 |
0.967 |
N2 |
H9 |
0.999 |
0.970 |
C28 |
H10 |
1.080 |
1.080 |
C15 |
H11 |
1.080 |
1.080 |
C17 |
H12 |
1.080 |
1.080 |
C14 |
H13 |
1.080 |
1.080 |
C19 |
H14 |
1.080 |
1.080 |
C29 |
H15 |
1.080 |
1.080 |
C22 |
H16 |
1.080 |
1.080 |
C23 |
H17 |
1.080 |
1.080 |
C24 |
H18 |
1.080 |
1.079 |
C25 |
H19 |
1.080 |
1.080 |
C26 |
H20 |
1.079 |
1.080 |
Bond Angles for E37
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C10 |
C9 |
H6 |
108.6 |
109.4 |
C10 |
C9 |
H7 |
108.6 |
109.5 |
C10 |
O4E |
H8 |
109.5 |
117.1 |
C9 |
C8 |
H4 |
109.5 |
109.5 |
C9 |
C8 |
H5 |
109.6 |
109.5 |
C8 |
C7 |
N2 |
106.9 |
109.5 |
C8 |
C7 |
H3 |
108.4 |
109.4 |
O1 |
C6 |
N1 |
117.7 |
120.0 |
C7 |
N2 |
C11 |
118.6 |
120.0 |
N2 |
C7 |
H3 |
109.1 |
109.5 |
C7 |
N2 |
H9 |
120.7 |
120.0 |
C6 |
N1 |
H1 |
120.0 |
120.0 |
C6 |
N1 |
H2 |
120.0 |
120.0 |
N2 |
C11 |
O2 |
118.4 |
120.0 |
N2 |
C11 |
C27 |
120.8 |
120.0 |
C11 |
N2 |
H9 |
120.7 |
120.0 |
O2 |
C11 |
C27 |
120.7 |
120.0 |
C11 |
C27 |
C14 |
119.7 |
120.0 |
C28 |
C27 |
C14 |
119.3 |
120.0 |
C28 |
C15 |
C16 |
120.4 |
120.0 |
C15 |
C28 |
H10 |
120.1 |
119.9 |
C28 |
C15 |
H11 |
119.8 |
120.0 |
C27 |
C14 |
C17 |
120.9 |
120.0 |
C27 |
C14 |
H13 |
119.5 |
120.0 |
C15 |
C16 |
C17 |
119.7 |
120.0 |
C15 |
C16 |
C18 |
120.4 |
120.0 |
C16 |
C15 |
H11 |
119.8 |
120.0 |
C14 |
C17 |
H12 |
120.1 |
120.0 |
C17 |
C16 |
C18 |
119.4 |
120.0 |
C16 |
C17 |
H12 |
120.1 |
120.0 |
C16 |
C18 |
S7 |
126.3 |
125.3 |
C19 |
C18 |
S7 |
109.2 |
109.5 |
C19 |
C20 |
C21 |
124.2 |
122.8 |
C19 |
C20 |
C29 |
109.7 |
114.5 |
C20 |
C19 |
H14 |
125.2 |
123.3 |
C18 |
S7 |
C29 |
102.3 |
91.7 |
C26 |
C25 |
H19 |
121.6 |
119.9 |
C25 |
C26 |
H20 |
118.1 |
120.1 |
C25 |
C24 |
H18 |
120.3 |
119.9 |
C29 |
C20 |
C21 |
126.1 |
122.7 |
C20 |
C21 |
C22 |
119.0 |
120.1 |
C20 |
C29 |
H15 |
125.5 |
124.7 |
C21 |
C22 |
C23 |
117.1 |
119.8 |
C21 |
C22 |
H16 |
121.5 |
120.1 |
C24 |
C23 |
H17 |
120.5 |
119.9 |
S7 |
C29 |
H15 |
125.5 |
124.6 |
C23 |
C22 |
H16 |
121.5 |
120.1 |
C22 |
C23 |
H17 |
120.5 |
119.9 |
H1 |
N1 |
H2 |
120.0 |
120.0 |
H4 |
C8 |
H5 |
109.5 |
109.5 |
H6 |
C9 |
H7 |
109.5 |
109.5 |
Torsion Angles for E37
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
O4 |
C10 |
C9 |
H6 |
141.1 |
240.0 |
O4 |
C10 |
C9 |
H7 |
260.1 |
120.0 |
O4 |
C10 |
O4E |
H8 |
0.0 |
359.9 |
C10 |
C9 |
C8 |
H4 |
206.8 |
60.0 |
C10 |
C9 |
C8 |
H5 |
326.9 |
300.0 |
H6 |
C9 |
C10 |
H7 |
241.0 |
120.0 |
O4E |
C10 |
C9 |
H6 |
321.6 |
60.0 |
O4E |
C10 |
C9 |
H7 |
80.6 |
300.0 |
C9 |
C8 |
C7 |
N2 |
298.2 |
295.0 |
C9 |
C8 |
C7 |
H3 |
55.7 |
55.0 |
H4 |
C8 |
C9 |
H5 |
239.9 |
120.0 |
C8 |
C7 |
N2 |
C11 |
134.6 |
154.9 |
N2 |
C7 |
C8 |
H3 |
242.6 |
240.0 |
C8 |
C7 |
N2 |
H9 |
314.6 |
335.0 |
O1 |
C6 |
N1 |
H1 |
360.0 |
360.0 |
O1 |
C6 |
N1 |
H2 |
180.0 |
180.0 |
C7 |
C6 |
N1 |
H1 |
179.5 |
180.3 |
C7 |
C6 |
N1 |
H2 |
359.5 |
0.3 |
C8 |
C7 |
N2 |
H3 |
117.0 |
120.0 |
C7 |
N2 |
C11 |
O2 |
1.9 |
0.1 |
C7 |
N2 |
C11 |
C27 |
177.9 |
180.0 |
C11 |
N2 |
C7 |
H9 |
180.0 |
179.9 |
H1 |
N1 |
C6 |
H2 |
180.0 |
180.0 |
C11 |
N2 |
C7 |
H3 |
17.6 |
35.0 |
C7 |
N2 |
C11 |
H9 |
180.0 |
180.1 |
O2 |
C11 |
N2 |
C27 |
184.0 |
180.1 |
N2 |
C11 |
C27 |
C14 |
165.2 |
180.0 |
N2 |
C11 |
O2 |
C27 |
176.0 |
179.9 |
O2 |
C11 |
N2 |
H9 |
181.9 |
180.0 |
O2 |
C11 |
C27 |
C14 |
341.1 |
359.9 |
N2 |
C11 |
C27 |
O2 |
184.1 |
180.1 |
C27 |
C11 |
N2 |
H9 |
357.9 |
359.9 |
C28 |
C27 |
C11 |
C14 |
176.9 |
180.3 |
C11 |
C27 |
C14 |
C17 |
177.7 |
179.8 |
C11 |
C27 |
C14 |
H13 |
357.7 |
0.1 |
C11 |
C27 |
C28 |
C14 |
183.0 |
179.7 |
C28 |
C27 |
C14 |
C17 |
0.7 |
359.4 |
C28 |
C27 |
C14 |
H13 |
180.7 |
179.7 |
C15 |
C28 |
C27 |
C14 |
359.1 |
0.3 |
C28 |
C15 |
C16 |
C17 |
4.0 |
360.0 |
C28 |
C15 |
C16 |
C18 |
175.7 |
180.0 |
C16 |
C15 |
C28 |
H11 |
180.0 |
180.0 |
C27 |
C14 |
C17 |
H12 |
181.9 |
180.4 |
C16 |
C15 |
C28 |
H10 |
178.6 |
180.0 |
C28 |
C15 |
C16 |
H11 |
180.0 |
180.0 |
C17 |
C16 |
C15 |
C18 |
188.3 |
179.9 |
C15 |
C16 |
C17 |
H12 |
175.8 |
179.9 |
C15 |
C16 |
C18 |
S7 |
188.8 |
359.9 |
C27 |
C14 |
C17 |
H13 |
180.0 |
180.3 |
C14 |
C17 |
C16 |
C18 |
184.0 |
179.7 |
C16 |
C17 |
C14 |
H12 |
180.0 |
180.2 |
C27 |
C14 |
C17 |
C16 |
1.9 |
0.5 |
C15 |
C16 |
C17 |
C18 |
171.8 |
180.1 |
C17 |
C16 |
C15 |
H11 |
184.0 |
179.9 |
C14 |
C17 |
C16 |
H12 |
180.0 |
179.8 |
C17 |
C16 |
C18 |
S7 |
0.6 |
180.0 |
C15 |
C16 |
C18 |
C17 |
188.2 |
179.9 |
C18 |
C16 |
C15 |
H11 |
355.7 |
360.0 |
C18 |
C16 |
C17 |
H12 |
4.0 |
359.9 |
C19 |
C18 |
C16 |
S7 |
170.4 |
180.4 |
C16 |
C18 |
S7 |
C29 |
174.2 |
180.0 |
C16 |
C18 |
C19 |
S7 |
188.2 |
179.7 |
C19 |
C18 |
S7 |
C29 |
2.6 |
359.7 |
C20 |
C19 |
C18 |
S7 |
356.8 |
0.3 |
C29 |
C20 |
C19 |
C21 |
182.0 |
180.0 |
C19 |
C20 |
C21 |
C22 |
169.3 |
180.0 |
C19 |
C20 |
C29 |
H15 |
179.2 |
180.0 |
C18 |
S7 |
C29 |
H15 |
179.1 |
180.1 |
C26 |
C25 |
C24 |
H18 |
180.8 |
179.7 |
C25 |
C24 |
C23 |
H17 |
179.3 |
180.0 |
C26 |
C21 |
C22 |
H16 |
181.9 |
180.3 |
C19 |
C20 |
C21 |
C29 |
182.4 |
180.0 |
C21 |
C20 |
C19 |
H14 |
0.6 |
0.0 |
C21 |
C20 |
C29 |
H15 |
1.3 |
359.9 |
C20 |
C21 |
C22 |
C23 |
178.8 |
180.0 |
C20 |
C21 |
C22 |
H16 |
358.8 |
359.9 |
C19 |
C20 |
C29 |
C21 |
177.9 |
180.0 |
C29 |
C20 |
C19 |
H14 |
182.6 |
180.0 |
C18 |
S7 |
C29 |
C20 |
359.1 |
0.3 |
C29 |
C20 |
C21 |
C22 |
346.9 |
0.0 |
S7 |
C29 |
C20 |
H15 |
180.0 |
179.8 |
C23 |
C22 |
C21 |
H16 |
180.0 |
180.0 |
C21 |
C22 |
C23 |
H17 |
179.4 |
180.0 |
C24 |
C23 |
C22 |
H16 |
179.5 |
180.0 |
C22 |
C23 |
C24 |
H17 |
180.0 |
180.0 |
S7 |
C29 |
C20 |
C21 |
181.3 |
179.8 |
C20 |
C29 |
S7 |
H15 |
180.0 |
180.2 |
C21 |
C22 |
C23 |
H16 |
180.0 |
180.0 |
C24 |
C23 |
C22 |
H17 |
180.0 |
180.0 |
C6 |
N1 |
H1 |
H2 |
180.0 |
180.0 |
C6 |
N1 |
H2 |
H1 |
180.0 |
180.0 |
C8 |
C7 |
H3 |
N2 |
244.0 |
240.0 |
H3 |
C7 |
N2 |
C11 |
17.6 |
35.0 |
H3 |
C7 |
N2 |
H9 |
197.6 |
215.1 |
C9 |
C8 |
H4 |
H5 |
120.1 |
240.0 |
H4 |
C8 |
C7 |
N2 |
178.3 |
55.0 |
H4 |
C8 |
C7 |
H3 |
295.8 |
175.0 |
C9 |
C8 |
H5 |
H4 |
239.9 |
120.0 |
H5 |
C8 |
C7 |
N2 |
58.2 |
175.0 |
H5 |
C8 |
C7 |
H3 |
175.7 |
295.0 |
C10 |
C9 |
H6 |
H7 |
118.4 |
240.0 |
H6 |
C9 |
C8 |
H4 |
86.3 |
180.0 |
H6 |
C9 |
C8 |
H5 |
206.4 |
60.0 |
C10 |
C9 |
H7 |
H6 |
241.5 |
119.9 |
H7 |
C9 |
C8 |
H4 |
327.3 |
300.0 |
H7 |
C9 |
C8 |
H5 |
87.4 |
180.0 |
C7 |
N2 |
H9 |
C11 |
180.0 |
179.9 |
H9 |
N2 |
C7 |
H3 |
197.6 |
215.1 |
H9 |
N2 |
C11 |
O2 |
181.9 |
180.0 |
H9 |
N2 |
C11 |
C27 |
357.9 |
359.9 |
H10 |
C28 |
C27 |
C14 |
179.1 |
180.3 |
H10 |
C28 |
C15 |
C16 |
178.6 |
180.0 |
H10 |
C28 |
C15 |
H11 |
358.6 |
0.1 |
C28 |
C15 |
H11 |
C16 |
180.0 |
180.0 |
H11 |
C15 |
C28 |
H10 |
358.6 |
0.1 |
H11 |
C15 |
C16 |
C17 |
184.0 |
179.9 |
H11 |
C15 |
C16 |
C18 |
355.7 |
360.0 |
H12 |
C17 |
C16 |
C18 |
4.0 |
359.9 |
C27 |
C14 |
H13 |
C17 |
180.0 |
179.7 |
H13 |
C14 |
C17 |
H12 |
1.9 |
0.1 |
H14 |
C19 |
C18 |
S7 |
176.8 |
180.2 |
H14 |
C19 |
C20 |
C21 |
0.6 |
0.0 |
H14 |
C19 |
C20 |
C29 |
182.6 |
180.0 |
H15 |
C29 |
C20 |
C21 |
1.3 |
359.9 |
C21 |
C22 |
H16 |
C23 |
180.0 |
180.0 |
H16 |
C22 |
C23 |
H17 |
359.4 |
0.0 |
H17 |
C23 |
C22 |
H16 |
359.4 |
0.0 |
H18 |
C24 |
C23 |
H17 |
359.3 |
0.0 |
H19 |
C25 |
C26 |
H20 |
0.6 |
359.4 |
H19 |
C25 |
C24 |
H18 |
0.8 |
0.2 |
H20 |
C26 |
C25 |
H19 |
0.6 |
359.4 |