PDB Chemical Component E36

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for E36

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
O1	C2	1.428	1.431
O1	C6	1.394	1.363
C2	C3	1.569	1.534
C3	O4	1.417	1.431
O4	C5	1.369	1.363
C5	C6	1.497	1.394
C5	C13	1.321	1.385
C6	C7	1.350	1.382
C7	C8	1.479	1.397
C8	N9	1.447	1.359
C8	C12	1.318	1.404
N9	C10	1.300	1.311
C10	N11	1.441	1.367
C10	S14	1.805	1.761
N11	C12	1.363	1.387
C12	C13	1.463	1.386
S14	C15	1.852	1.810
C15	C16	1.572	1.506
C16	O17	1.300	1.213
C16	C18	1.534	1.471
C18	C19	1.474	1.399
C18	C23	1.359	1.399
C19	C20	1.350	1.379
C20	C21	1.462	1.385
C20	S24	1.815	1.762
C21	C22	1.342	1.386
C21	CL26	1.708	1.736
C22	C23	1.446	1.377
S24	O25	1.555	1.421
S24	O27	1.523	1.421
S24	N28	1.707	1.656
C2	H2	1.100	1.090
C2	H2A	1.100	1.091
C3	H3	1.100	1.090
C3	H3A	1.100	1.090
C7	H7	1.080	1.080
N11	HN11	1.000	0.970
C13	H13	1.080	1.080
C15	H15	1.100	1.089
C15	H15A	1.100	1.091
C19	H19	1.080	1.080
C22	H22	1.080	1.081
C23	H23	1.080	1.080
N28	HN28	1.000	0.970
N28	HN2A	1.000	0.969

Bond Angles for E36

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	O1	C6	118.2	116.7
O1	C2	C3	111.2	108.2
O1	C2	H2	108.9	109.7
O1	C2	H2A	108.9	109.7
O1	C6	C5	114.8	120.7
O1	C6	C7	124.1	119.1
C2	C3	O4	113.2	108.3
C3	C2	H2	108.9	109.8
C3	C2	H2A	108.9	109.7
C2	C3	H3	108.3	109.7
C2	C3	H3A	108.2	109.7
C3	O4	C5	112.9	116.7
O4	C3	H3	108.2	109.7
O4	C3	H3A	108.2	109.7
O4	C5	C6	115.3	120.7
O4	C5	C13	122.0	119.1
C6	C5	C13	122.7	120.2
C5	C6	C7	121.1	120.3
C5	C13	C12	115.0	120.0
C5	C13	H13	122.5	120.0
C6	C7	C8	115.8	120.0
C6	C7	H7	122.1	120.0
C7	C8	N9	129.0	133.3
C7	C8	C12	121.1	119.5
C8	C7	H7	122.1	120.0
N9	C8	C12	109.9	107.2
C8	N9	C10	104.7	109.7
C8	C12	N11	109.2	106.1
C8	C12	C13	124.4	120.0
N9	C10	N11	111.0	109.8
N9	C10	S14	128.1	125.1
N11	C10	S14	120.9	125.1
C10	N11	C12	105.1	107.2
C10	N11	HN11	127.5	126.3
C10	S14	C15	96.0	100.0
N11	C12	C13	126.4	133.8
C12	N11	HN11	127.4	126.4
C12	C13	H13	122.5	120.0
S14	C15	C16	110.2	109.5
S14	C15	H15	109.2	109.5
S14	C15	H15A	109.2	109.5
C15	C16	O17	118.2	120.0
C15	C16	C18	120.0	120.0
C16	C15	H15	109.2	109.5
C16	C15	H15A	109.2	109.4
O17	C16	C18	121.8	120.0
C16	C18	C19	121.5	120.1
C16	C18	C23	118.0	120.2
C19	C18	C23	120.5	119.7
C18	C19	C20	120.1	119.8
C18	C19	H19	120.0	120.1
C18	C23	C22	120.1	119.8
C18	C23	H23	119.9	120.0
C19	C20	C21	117.1	120.2
C19	C20	S24	117.5	119.9
C20	C19	H19	119.9	120.1
C21	C20	S24	125.2	119.9
C20	C21	C22	124.2	120.3
C20	C21	CL26	114.4	119.8
C20	S24	O25	100.4	106.4
C20	S24	O27	110.8	106.4
C20	S24	N28	104.2	107.2
C22	C21	CL26	121.4	119.8
C21	C22	C23	117.9	120.2
C21	C22	H22	121.0	119.9
C23	C22	H22	121.1	119.9
C22	C23	H23	120.0	120.1
O25	S24	O27	114.1	123.1
O25	S24	N28	113.1	106.4
O27	S24	N28	113.1	106.4
S24	N28	HN28	109.5	120.0
S24	N28	HN2A	109.5	120.0
H2	C2	H2A	110.0	109.8
H3	C3	H3A	110.6	109.7
H15	C15	H15A	109.7	109.5
HN28	N28	HN2A	109.4	120.0

Torsion Angles for E36

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C2	O1	C6	C5	43.2	342.8
C2	O1	C6	C7	223.4	162.8
O1	C2	C3	O4	344.5	300.1
C3	C2	O1	H2	240.0	240.3
C3	C2	O1	H2A	120.0	119.6
O1	C2	C3	H3	104.5	59.8
O1	C2	C3	H3A	224.5	180.4
H2	C2	O1	H2A	240.0	239.4
C6	O1	C2	C3	326.8	46.3
C6	O1	C2	H2	86.8	166.1
C6	O1	C2	H2A	206.8	286.7
O4	C5	C6	O1	358.4	0.2
O1	C6	C5	C13	180.6	180.1
C5	C6	O1	C7	179.8	180.0
O1	C6	C7	C8	178.8	179.9
O1	C6	C7	H7	358.8	359.9
C3	C2	O1	C6	326.8	46.3
O1	C2	C3	H2	120.0	119.7
O1	C2	C3	H2A	240.0	240.4
C2	C3	O4	C5	55.7	46.3
O4	C3	C2	H3	240.0	240.3
O4	C3	C2	H3A	120.0	119.7
H2	C2	C3	H2A	120.0	120.7
H3	C3	C2	H3A	240.0	239.4
O4	C3	C2	H2	224.5	180.4
O4	C3	C2	H2A	104.5	59.7
C2	C3	O4	H3	120.0	119.7
C2	C3	O4	H3A	240.0	240.3
C3	O4	C5	C6	312.8	342.8
C3	O4	C5	C13	130.6	162.9
H3	C3	O4	H3A	120.0	120.6
O1	C6	C5	O4	358.4	0.2
C5	O4	C3	H3	295.7	286.6
C5	O4	C3	H3A	175.7	166.0
C6	C5	O4	C13	182.2	179.9
O4	C5	C6	C7	178.2	180.2
O4	C5	C13	C12	182.5	179.9
O4	C5	C13	H13	2.5	359.8
O1	C6	C5	C7	180.2	180.0
O4	C5	C6	C13	177.8	180.1
C6	C5	C13	C12	0.2	360.0
C6	C5	C13	H13	180.1	179.9
C5	C6	C7	C8	359.0	360.0
C5	C6	C7	H7	179.0	179.9
O4	C5	C13	C6	182.3	179.9
C13	C5	C6	C7	0.4	0.1
C8	C12	C13	C5	360.0	359.9
N11	C12	C13	C5	178.8	180.0
C12	C13	C5	H13	180.0	180.1
O1	C6	C7	C5	179.8	180.0
C7	C6	C5	C13	0.4	0.1
C6	C7	C8	N9	181.7	180.0
C6	C7	C8	C12	1.1	359.9
C8	C7	C6	H7	180.0	180.0
C6	C7	C8	H7	180.0	180.0
N9	C8	C7	C12	180.6	180.1
C7	C8	N9	C10	178.9	179.9
C7	C8	C12	N11	180.4	180.1
C7	C8	C12	C13	359.4	0.1
C7	C8	N9	C12	179.5	179.9
N9	C8	C7	H7	1.7	0.0
N9	C8	C12	N11	359.9	360.0
N9	C8	C12	C13	178.9	180.0
C8	N9	C10	N11	1.0	360.0
C8	N9	C10	S14	178.8	179.9
C5	C13	C12	C8	360.0	359.9
C7	C8	C12	N9	180.5	180.1
C12	C8	C7	H7	181.1	180.0
C12	C8	N9	C10	359.4	0.0
C10	N11	C12	C8	0.7	0.0
N11	C12	C8	C13	181.0	180.0
C8	C12	N11	HN11	180.7	180.0
C8	C12	C13	H13	180.0	180.0
C10	N9	C8	C12	359.4	0.0
N11	C10	N9	S14	182.3	180.1
N9	C10	N11	C12	358.9	0.0
N9	C10	N11	HN11	178.9	180.0
N9	C10	S14	C15	209.1	0.0
C8	C12	N11	C10	0.7	0.0
N9	C10	N11	S14	177.9	179.9
N11	C10	S14	C15	26.7	180.0
C10	N11	C12	C13	181.7	179.9
C12	N11	C10	HN11	180.0	180.0
N9	C10	S14	N11	182.5	180.1
S14	C10	N11	C12	181.0	180.1
S14	C10	N11	HN11	1.0	0.0
C10	S14	C15	C16	52.8	179.9
C10	S14	C15	H15	172.8	300.0
C10	S14	C15	H15A	292.8	60.0
C5	C13	C12	N11	178.8	180.0
C8	C12	N11	C13	178.9	180.1
C12	N11	C10	S14	181.0	180.1
C10	N11	C12	HN11	180.0	180.0
N11	C12	C13	H13	358.8	0.1
C5	C13	C12	H13	180.0	179.9
C8	C12	C13	N11	181.2	179.9
C13	C12	N11	HN11	1.8	360.0
S14	C15	C16	O17	31.5	0.1
S14	C15	C16	C18	210.3	180.0
C16	C15	S14	H15	240.0	239.9
C16	C15	S14	H15A	120.0	119.9
H15	C15	S14	H15A	240.0	240.0
S14	C15	C16	H15	120.0	120.0
S14	C15	C16	H15A	240.0	240.0
O17	C16	C15	C18	181.2	180.1
C15	C16	C18	C19	320.4	180.0
C15	C16	C18	C23	142.3	359.8
H15	C15	C16	H15A	120.0	120.0
C15	C16	O17	C18	178.8	179.9
O17	C16	C15	H15	271.5	240.1
O17	C16	C15	H15A	151.4	120.1
O17	C16	C18	C19	139.1	359.9
O17	C16	C18	C23	321.0	179.7
C15	C16	C18	O17	181.2	180.1
C18	C16	C15	H15	90.3	59.9
C18	C16	C15	H15A	330.3	299.9
C19	C18	C16	C23	178.1	180.2
C16	C18	C19	C20	179.6	180.0
C16	C18	C19	H19	359.6	360.0
C16	C18	C23	C22	180.7	179.7
C16	C18	C23	H23	0.7	360.0
C16	C18	C19	C23	181.9	179.8
C19	C18	C23	C22	2.6	359.5
C19	C18	C23	H23	182.6	179.7
C18	C19	C20	C21	0.5	0.1
C18	C19	C20	S24	176.7	180.0
C20	C19	C18	H19	180.0	180.0
C16	C18	C23	C19	178.1	180.2
C23	C18	C19	C20	357.6	0.2
C23	C18	C19	H19	177.6	180.2
C21	C22	C23	C18	359.0	0.6
C18	C23	C22	H22	179.0	180.3
C22	C23	C18	H23	180.0	179.7
C20	C19	C18	C23	357.6	0.2
C18	C19	C20	H19	180.0	180.0
C21	C20	C19	S24	183.8	180.1
C19	C20	C21	C22	1.1	360.0
C19	C20	C21	CL26	179.5	180.0
C19	C20	S24	O25	245.5	228.6
C19	C20	S24	O27	124.7	1.5
C19	C20	S24	N28	2.8	115.0
C19	C20	C21	S24	175.8	179.9
C21	C20	C19	H19	180.5	180.1
C21	C20	S24	O25	61.3	48.5
C21	C20	S24	O27	300.5	181.4
C21	C20	S24	N28	178.6	294.9
C22	C21	C20	CL26	181.6	180.0
C20	C21	C22	C23	359.1	359.7
C20	C21	C22	H22	179.1	180.0
C19	C20	S24	C21	184.2	180.1
S24	C20	C19	H19	356.7	360.0
S24	C20	C21	C22	185.3	180.0
S24	C20	C21	CL26	3.7	0.0
O25	S24	C20	O27	120.9	227.1
O25	S24	C20	N28	242.8	113.6
O27	S24	C20	N28	121.9	246.4
C20	S24	N28	HN28	180.0	0.0
C20	S24	N28	HN2A	300.0	180.0
C18	C23	C22	C21	359.0	0.6
C22	C21	C20	S24	185.3	180.0
C20	C21	C22	CL26	178.3	180.0
C23	C22	C21	H22	180.0	179.7
C21	C22	C23	H23	179.0	180.3
CL26	C21	C20	S24	3.7	0.0
C20	C21	CL26	C22	181.6	180.0
CL26	C21	C22	C23	180.8	179.7
CL26	C21	C22	H22	0.8	0.0
C18	C23	C22	H23	180.0	180.3
C23	C22	C21	CL26	180.8	179.7
C21	C22	C23	H22	180.0	180.3
C20	S24	O25	O27	241.5	122.9
C20	S24	O25	N28	110.5	245.9
O27	S24	O25	N28	229.0	122.9
O25	S24	N28	HN28	288.1	246.5
O25	S24	N28	HN2A	48.1	66.4
C20	S24	O27	O25	112.4	237.1
C20	S24	O27	N28	243.4	114.1
O25	S24	O27	N28	131.1	237.1
O27	S24	N28	HN28	59.6	113.6
O27	S24	N28	HN2A	179.6	293.5
C20	S24	N28	O25	251.9	113.5
C20	S24	N28	O27	120.4	246.4
O25	S24	N28	O27	228.5	132.9
HN28	N28	S24	HN2A	240.0	180.0
H2	C2	O1	C6	86.8	166.1
O1	C2	H2	C3	238.5	241.2
O1	C2	H2	H2A	119.3	120.6
H2	C2	C3	O4	224.5	180.4
C3	C2	H2	H2A	240.7	239.4
H2	C2	C3	H3	344.5	300.1
H2	C2	C3	H3A	104.5	60.7
H2A	C2	O1	C6	206.8	286.7
O1	C2	H2A	C3	121.4	118.7
O1	C2	H2A	H2	240.7	239.4
H2A	C2	C3	O4	104.5	59.7
C3	C2	H2A	H2	119.3	120.7
H2A	C2	C3	H3	224.5	179.4
H2A	C2	C3	H3A	344.5	300.0
C2	C3	H3	O4	236.9	241.2
H3	C3	C2	H2	344.5	300.1
H3	C3	C2	H2A	224.5	179.4
C2	C3	H3	H3A	118.5	120.6
H3	C3	O4	C5	295.7	286.6
O4	C3	H3	H3A	241.5	239.4
C2	C3	H3A	O4	123.0	118.8
H3A	C3	C2	H2	104.5	60.7
H3A	C3	C2	H2A	344.5	300.0
C2	C3	H3A	H3	241.5	239.4
H3A	C3	O4	C5	175.7	166.0
O4	C3	H3A	H3	118.5	120.6
C6	C7	H7	C8	180.0	180.0
H7	C7	C8	N9	1.7	0.0
H7	C7	C8	C12	181.1	180.0
HN11	N11	C10	S14	1.0	0.0
C10	N11	HN11	C12	180.0	180.0
HN11	N11	C12	C13	1.8	360.0
C5	C13	H13	C12	180.0	180.1
S14	C15	H15	C16	239.4	240.0
S14	C15	H15	H15A	119.7	120.0
H15	C15	C16	O17	271.5	240.1
H15	C15	C16	C18	90.3	59.9
C16	C15	H15	H15A	240.3	240.0
S14	C15	H15A	C16	120.6	120.0
S14	C15	H15A	H15	240.3	240.0
H15A	C15	C16	O17	151.4	120.1
H15A	C15	C16	C18	330.3	299.9
C16	C15	H15A	H15	119.7	120.0
H19	C19	C18	C23	177.6	180.2
C18	C19	H19	C20	180.0	180.0
H19	C19	C20	C21	180.5	180.1
H19	C19	C20	S24	356.7	360.0
H22	C22	C21	CL26	0.8	0.0
C21	C22	H22	C23	180.0	179.7
H22	C22	C23	H23	359.0	0.0
C18	C23	H23	C22	180.0	179.7
H23	C23	C22	H22	359.0	0.0
S24	N28	HN28	HN2A	120.0	180.0
S24	N28	HN2A	HN28	240.0	180.0