PDB Chemical Component E2J
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for E2J
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
F32 |
C29 |
1.351 |
1.351 |
C29 |
C28 |
1.385 |
1.386 |
C29 |
C30 |
1.386 |
1.385 |
C28 |
C27 |
1.380 |
1.379 |
C30 |
C31 |
1.380 |
1.379 |
C27 |
C26 |
1.394 |
1.394 |
C31 |
C26 |
1.397 |
1.394 |
C26 |
C18 |
1.491 |
1.482 |
C18 |
C19 |
1.488 |
1.483 |
C18 |
C17 |
1.350 |
1.339 |
C16 |
C17 |
1.517 |
1.514 |
C16 |
C15 |
1.534 |
1.533 |
C24 |
C19 |
1.396 |
1.394 |
C24 |
C23 |
1.380 |
1.380 |
C19 |
C20 |
1.398 |
1.394 |
C17 |
C33 |
1.515 |
1.515 |
C23 |
C22 |
1.385 |
1.386 |
C15 |
N14 |
1.471 |
1.469 |
C20 |
C21 |
1.380 |
1.380 |
C22 |
C21 |
1.388 |
1.385 |
C22 |
F25 |
1.350 |
1.351 |
C33 |
C34 |
1.529 |
1.532 |
N14 |
C34 |
1.469 |
1.469 |
N14 |
C13 |
1.466 |
1.469 |
C13 |
C12 |
1.528 |
1.530 |
C01 |
C02 |
1.506 |
1.507 |
C12 |
C03 |
1.505 |
1.508 |
C02 |
C03 |
1.381 |
1.379 |
C02 |
N11 |
1.323 |
1.327 |
C03 |
C04 |
1.395 |
1.395 |
N11 |
C10 |
1.305 |
1.321 |
C04 |
O05 |
1.223 |
1.221 |
C04 |
N06 |
1.371 |
1.365 |
C10 |
N06 |
1.370 |
1.361 |
C10 |
S09 |
1.776 |
1.772 |
N06 |
C07 |
1.376 |
1.373 |
C07 |
C08 |
1.334 |
1.322 |
S09 |
C08 |
1.788 |
1.772 |
C12 |
H1 |
1.100 |
1.090 |
C12 |
H2 |
1.100 |
1.090 |
C13 |
H3 |
1.100 |
1.090 |
C13 |
H4 |
1.100 |
1.090 |
C15 |
H5 |
1.100 |
1.090 |
C15 |
H6 |
1.100 |
1.091 |
C28 |
H7 |
1.080 |
1.081 |
C31 |
H8 |
1.080 |
1.080 |
C33 |
H9 |
1.100 |
1.090 |
C33 |
H10 |
1.100 |
1.090 |
C34 |
H11 |
1.100 |
1.090 |
C34 |
H12 |
1.100 |
1.090 |
C21 |
H13 |
1.080 |
1.080 |
C01 |
H14 |
1.100 |
1.089 |
C01 |
H15 |
1.100 |
1.090 |
C01 |
H16 |
1.100 |
1.090 |
C07 |
H18 |
1.079 |
1.080 |
C08 |
H19 |
1.080 |
1.080 |
C16 |
H21 |
1.100 |
1.090 |
C16 |
H22 |
1.100 |
1.090 |
C20 |
H23 |
1.080 |
1.079 |
C23 |
H24 |
1.080 |
1.080 |
C24 |
H25 |
1.080 |
1.080 |
C27 |
H26 |
1.080 |
1.080 |
C30 |
H27 |
1.080 |
1.080 |
Bond Angles for E2J
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C29 |
C28 |
H7 |
119.9 |
119.9 |
C29 |
C30 |
H27 |
119.9 |
119.9 |
C27 |
C28 |
H7 |
119.9 |
120.0 |
C28 |
C27 |
H26 |
119.8 |
120.0 |
C30 |
C31 |
H8 |
119.9 |
120.0 |
C31 |
C26 |
C18 |
122.0 |
120.1 |
C26 |
C18 |
C19 |
117.0 |
120.0 |
C26 |
C18 |
C17 |
124.8 |
120.0 |
C18 |
C19 |
C20 |
120.8 |
120.1 |
C18 |
C17 |
C16 |
124.6 |
121.1 |
C17 |
C16 |
H21 |
109.9 |
109.7 |
C17 |
C16 |
H22 |
109.9 |
109.7 |
C16 |
C15 |
H5 |
109.5 |
109.5 |
C16 |
C15 |
H6 |
109.5 |
109.5 |
C24 |
C23 |
H24 |
120.0 |
119.9 |
C19 |
C20 |
C21 |
119.8 |
119.9 |
C19 |
C20 |
H23 |
120.1 |
120.1 |
C17 |
C33 |
H9 |
110.0 |
109.7 |
C17 |
C33 |
H10 |
110.0 |
109.7 |
C23 |
C22 |
F25 |
119.6 |
119.9 |
C15 |
N14 |
C34 |
110.2 |
111.6 |
N14 |
C15 |
H5 |
109.5 |
109.5 |
N14 |
C15 |
H6 |
109.5 |
109.5 |
C20 |
C21 |
H13 |
119.9 |
119.9 |
C22 |
C21 |
H13 |
119.9 |
120.0 |
C34 |
C33 |
H9 |
110.0 |
109.8 |
C34 |
C33 |
H10 |
110.0 |
109.8 |
C33 |
C34 |
H11 |
109.9 |
109.5 |
C33 |
C34 |
H12 |
109.9 |
109.5 |
N14 |
C34 |
H11 |
109.9 |
109.5 |
N14 |
C34 |
H12 |
109.9 |
109.5 |
N14 |
C13 |
H3 |
109.4 |
109.5 |
N14 |
C13 |
H4 |
109.4 |
109.4 |
C13 |
C12 |
C03 |
107.3 |
109.4 |
C13 |
C12 |
H1 |
110.0 |
109.5 |
C13 |
C12 |
H2 |
110.0 |
109.5 |
C01 |
C02 |
C03 |
122.1 |
120.4 |
C02 |
C01 |
H14 |
109.5 |
109.5 |
C02 |
C01 |
H15 |
109.5 |
109.5 |
C02 |
C01 |
H16 |
109.5 |
109.5 |
C12 |
C03 |
C02 |
120.6 |
120.3 |
C12 |
C03 |
C04 |
119.4 |
120.3 |
C03 |
C12 |
H1 |
110.0 |
109.5 |
C03 |
C12 |
H2 |
110.0 |
109.4 |
C02 |
C03 |
C04 |
119.9 |
119.3 |
C03 |
C04 |
O05 |
119.7 |
120.1 |
C03 |
C04 |
N06 |
119.6 |
119.8 |
N11 |
C10 |
N06 |
124.2 |
122.7 |
N11 |
C10 |
S09 |
132.3 |
131.4 |
O05 |
C04 |
N06 |
120.7 |
120.1 |
C10 |
N06 |
C04 |
116.3 |
117.6 |
C04 |
N06 |
C07 |
127.5 |
127.0 |
N06 |
C10 |
S09 |
103.6 |
105.9 |
C10 |
N06 |
C07 |
116.2 |
115.3 |
C10 |
S09 |
C08 |
97.1 |
94.3 |
N06 |
C07 |
C08 |
121.1 |
119.0 |
N06 |
C07 |
H18 |
119.4 |
120.5 |
C08 |
C07 |
H18 |
119.5 |
120.5 |
C07 |
C08 |
H19 |
129.0 |
127.3 |
S09 |
C08 |
H19 |
129.0 |
127.2 |
H1 |
C12 |
H2 |
109.5 |
109.5 |
H3 |
C13 |
H4 |
109.5 |
109.5 |
H5 |
C15 |
H6 |
109.5 |
109.4 |
H9 |
C33 |
H10 |
109.5 |
109.7 |
H11 |
C34 |
H12 |
109.5 |
109.5 |
H14 |
C01 |
H15 |
109.4 |
109.5 |
H14 |
C01 |
H16 |
109.5 |
109.5 |
H15 |
C01 |
H16 |
109.5 |
109.4 |
H21 |
C16 |
H22 |
109.5 |
109.8 |
Torsion Angles for E2J
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
F32 |
C29 |
C28 |
H7 |
0.1 |
0.0 |
F32 |
C29 |
C30 |
H27 |
0.2 |
359.7 |
C27 |
C28 |
C29 |
H7 |
180.0 |
180.0 |
C29 |
C28 |
C27 |
H26 |
180.4 |
180.0 |
C30 |
C29 |
C28 |
H7 |
180.2 |
179.8 |
C29 |
C30 |
C31 |
H8 |
179.1 |
180.0 |
C29 |
C28 |
C27 |
H7 |
180.0 |
180.0 |
C31 |
C26 |
C18 |
C19 |
237.9 |
294.9 |
C31 |
C26 |
C18 |
C17 |
57.5 |
115.0 |
C26 |
C18 |
C19 |
C20 |
89.7 |
295.1 |
C26 |
C18 |
C17 |
C16 |
3.2 |
179.9 |
C26 |
C18 |
C19 |
C17 |
179.6 |
180.1 |
C18 |
C19 |
C20 |
C21 |
180.0 |
180.0 |
C18 |
C19 |
C20 |
H23 |
0.1 |
359.9 |
C26 |
C18 |
C17 |
C19 |
180.4 |
179.9 |
C17 |
C18 |
C19 |
C20 |
270.0 |
115.0 |
C18 |
C17 |
C16 |
H21 |
355.4 |
109.3 |
C18 |
C17 |
C16 |
H22 |
115.9 |
348.7 |
C18 |
C17 |
C33 |
H9 |
242.0 |
11.2 |
C18 |
C17 |
C33 |
H10 |
2.7 |
250.7 |
C17 |
C16 |
C15 |
H5 |
64.7 |
186.2 |
C17 |
C16 |
C15 |
H6 |
184.7 |
66.2 |
C16 |
C17 |
C33 |
H9 |
65.4 |
191.3 |
C16 |
C17 |
C33 |
H10 |
186.1 |
70.7 |
H21 |
C16 |
C17 |
H22 |
239.4 |
120.6 |
N14 |
C15 |
C16 |
H5 |
240.0 |
120.0 |
N14 |
C15 |
C16 |
H6 |
120.0 |
240.0 |
H5 |
C15 |
C16 |
H6 |
239.9 |
120.0 |
C24 |
C19 |
C20 |
H23 |
179.4 |
180.2 |
C24 |
C23 |
C22 |
F25 |
180.0 |
180.3 |
C19 |
C20 |
C21 |
H13 |
180.4 |
180.0 |
C26 |
C18 |
C17 |
C33 |
186.9 |
360.0 |
C34 |
C33 |
C17 |
H9 |
240.3 |
119.7 |
C34 |
C33 |
C17 |
H10 |
119.7 |
240.3 |
C17 |
C33 |
C34 |
H11 |
178.8 |
173.7 |
C17 |
C33 |
C34 |
H12 |
299.3 |
293.8 |
H9 |
C33 |
C17 |
H10 |
239.3 |
120.5 |
C23 |
C22 |
C21 |
H13 |
179.9 |
179.4 |
C16 |
C15 |
N14 |
H5 |
120.0 |
240.0 |
C16 |
C15 |
N14 |
H6 |
240.1 |
120.0 |
C15 |
N14 |
C34 |
H11 |
172.4 |
174.7 |
C15 |
N14 |
C34 |
H12 |
51.9 |
54.6 |
C15 |
N14 |
C13 |
H3 |
277.6 |
50.0 |
C15 |
N14 |
C13 |
H4 |
37.5 |
290.0 |
H5 |
C15 |
N14 |
H6 |
120.1 |
240.0 |
C19 |
C20 |
C21 |
H23 |
180.0 |
179.9 |
C22 |
C21 |
C20 |
H13 |
180.0 |
180.0 |
C20 |
C21 |
C22 |
H13 |
180.0 |
180.0 |
F25 |
C22 |
C21 |
H13 |
360.0 |
360.0 |
C17 |
C33 |
C34 |
H9 |
119.7 |
240.3 |
C17 |
C33 |
C34 |
H10 |
240.3 |
119.7 |
C15 |
N14 |
C34 |
C33 |
292.2 |
294.6 |
N14 |
C34 |
C33 |
H11 |
240.3 |
240.0 |
N14 |
C34 |
C33 |
H12 |
119.7 |
120.0 |
H9 |
C33 |
C34 |
H10 |
120.7 |
239.4 |
H11 |
C34 |
C33 |
H12 |
239.5 |
239.9 |
C34 |
N14 |
C15 |
H5 |
306.3 |
185.4 |
C34 |
N14 |
C15 |
H6 |
186.2 |
305.4 |
N14 |
C34 |
C33 |
H9 |
299.4 |
173.5 |
N14 |
C34 |
C33 |
H10 |
178.7 |
294.1 |
C33 |
C34 |
N14 |
H11 |
119.7 |
120.0 |
C33 |
C34 |
N14 |
H12 |
240.3 |
240.0 |
C34 |
N14 |
C13 |
H3 |
38.3 |
174.7 |
C34 |
N14 |
C13 |
H4 |
158.2 |
54.7 |
H11 |
C34 |
N14 |
H12 |
120.5 |
120.0 |
N14 |
C13 |
C12 |
H1 |
301.3 |
300.0 |
N14 |
C13 |
C12 |
H2 |
62.0 |
60.0 |
H3 |
C13 |
N14 |
H4 |
240.1 |
120.0 |
C13 |
C12 |
C03 |
C02 |
96.2 |
95.0 |
C13 |
C12 |
C03 |
C04 |
276.9 |
275.0 |
C03 |
C12 |
C13 |
H1 |
240.4 |
240.0 |
C03 |
C12 |
C13 |
H2 |
119.7 |
119.9 |
H1 |
C12 |
C13 |
H2 |
239.3 |
239.9 |
C12 |
C03 |
C02 |
C01 |
0.8 |
360.0 |
C01 |
C02 |
C03 |
C04 |
180.0 |
180.0 |
H14 |
C01 |
C02 |
H15 |
240.0 |
240.0 |
H14 |
C01 |
C02 |
H16 |
120.0 |
120.0 |
H15 |
C01 |
C02 |
H16 |
240.0 |
240.1 |
C13 |
C12 |
C03 |
H1 |
119.7 |
120.1 |
C13 |
C12 |
C03 |
H2 |
240.3 |
240.0 |
C01 |
C02 |
C03 |
C12 |
0.8 |
360.0 |
C02 |
C03 |
C12 |
C04 |
179.3 |
180.0 |
C12 |
C03 |
C04 |
O05 |
359.5 |
360.0 |
C12 |
C03 |
C04 |
N06 |
179.6 |
180.0 |
H1 |
C12 |
C03 |
H2 |
120.7 |
119.9 |
C03 |
C02 |
C01 |
H14 |
179.7 |
90.0 |
C03 |
C02 |
C01 |
H15 |
299.7 |
210.0 |
C03 |
C02 |
C01 |
H16 |
59.7 |
330.0 |
C12 |
C03 |
C02 |
C04 |
180.7 |
180.0 |
C02 |
C03 |
C12 |
H1 |
336.5 |
335.0 |
C02 |
C03 |
C12 |
H2 |
215.9 |
215.0 |
C02 |
C03 |
C04 |
O05 |
180.2 |
180.0 |
C02 |
C03 |
C04 |
N06 |
0.4 |
0.0 |
C02 |
N11 |
C10 |
N06 |
0.1 |
0.1 |
C02 |
N11 |
C10 |
S09 |
180.0 |
179.7 |
C12 |
C03 |
C04 |
C02 |
179.3 |
180.0 |
C04 |
C03 |
C12 |
H1 |
157.3 |
155.0 |
C04 |
C03 |
C12 |
H2 |
36.6 |
35.0 |
O05 |
C04 |
C03 |
N06 |
179.8 |
179.9 |
C10 |
N06 |
C04 |
C03 |
359.8 |
0.0 |
C03 |
C04 |
N06 |
C07 |
179.8 |
180.2 |
N11 |
C10 |
N06 |
C04 |
360.0 |
359.9 |
N06 |
C10 |
N11 |
S09 |
180.1 |
180.4 |
N11 |
C10 |
N06 |
C07 |
179.9 |
179.7 |
N11 |
C10 |
S09 |
C08 |
180.1 |
180.3 |
C03 |
C04 |
O05 |
N06 |
180.2 |
180.1 |
C10 |
N06 |
C04 |
O05 |
180.0 |
180.1 |
O05 |
C04 |
N06 |
C07 |
0.0 |
0.3 |
C03 |
C04 |
N06 |
O05 |
179.8 |
179.9 |
C04 |
N06 |
C10 |
S09 |
180.1 |
180.2 |
C10 |
N06 |
C04 |
C07 |
179.9 |
179.8 |
C04 |
N06 |
C07 |
C08 |
179.9 |
179.7 |
C04 |
N06 |
C07 |
H18 |
359.9 |
359.7 |
C03 |
C04 |
N06 |
C10 |
359.8 |
0.0 |
N11 |
C10 |
N06 |
S09 |
179.9 |
179.7 |
O05 |
C04 |
N06 |
C10 |
180.0 |
180.1 |
C04 |
N06 |
C10 |
C07 |
180.0 |
180.2 |
N06 |
C10 |
S09 |
C08 |
360.0 |
360.0 |
C10 |
N06 |
C07 |
C08 |
360.0 |
359.9 |
C10 |
N06 |
C07 |
H18 |
180.0 |
180.0 |
N11 |
C10 |
S09 |
N06 |
180.1 |
180.3 |
S09 |
C10 |
N06 |
C04 |
180.1 |
180.2 |
S09 |
C10 |
N06 |
C07 |
0.0 |
0.0 |
C10 |
S09 |
C08 |
H19 |
180.0 |
180.1 |
C10 |
N06 |
C07 |
C04 |
180.1 |
180.2 |
C07 |
N06 |
C10 |
S09 |
0.0 |
0.0 |
C08 |
C07 |
N06 |
H18 |
180.0 |
180.0 |
N06 |
C07 |
C08 |
H19 |
180.0 |
179.9 |
C10 |
S09 |
C08 |
C07 |
0.0 |
360.0 |
N06 |
C07 |
C08 |
H18 |
180.0 |
180.0 |
S09 |
C08 |
C07 |
H19 |
180.0 |
180.1 |
S09 |
C08 |
C07 |
H18 |
180.0 |
180.0 |
C07 |
C08 |
S09 |
H19 |
180.0 |
179.9 |
C13 |
C12 |
H1 |
C03 |
242.0 |
240.0 |
C13 |
C12 |
H1 |
H2 |
121.0 |
120.1 |
H1 |
C12 |
C03 |
C02 |
336.5 |
335.0 |
H1 |
C12 |
C03 |
C04 |
157.3 |
155.0 |
C03 |
C12 |
H1 |
H2 |
239.0 |
240.1 |
C13 |
C12 |
H2 |
C03 |
118.0 |
119.9 |
C13 |
C12 |
H2 |
H1 |
239.0 |
239.9 |
H2 |
C12 |
C03 |
C02 |
215.9 |
215.0 |
H2 |
C12 |
C03 |
C04 |
36.6 |
35.0 |
C03 |
C12 |
H2 |
H1 |
121.0 |
119.9 |
N14 |
C13 |
H3 |
H4 |
119.8 |
240.0 |
H3 |
C13 |
C12 |
C03 |
61.6 |
299.9 |
H3 |
C13 |
C12 |
H1 |
181.2 |
59.9 |
H3 |
C13 |
C12 |
H2 |
301.9 |
180.0 |
N14 |
C13 |
H4 |
H3 |
240.2 |
120.0 |
H4 |
C13 |
C12 |
C03 |
301.7 |
60.0 |
H4 |
C13 |
C12 |
H1 |
61.3 |
180.0 |
H4 |
C13 |
C12 |
H2 |
182.0 |
300.1 |
C16 |
C15 |
H5 |
H6 |
120.0 |
239.9 |
H5 |
C15 |
N14 |
C34 |
306.3 |
185.4 |
N14 |
C15 |
H5 |
H6 |
239.9 |
120.0 |
C16 |
C15 |
H6 |
H5 |
239.9 |
120.1 |
H6 |
C15 |
N14 |
C34 |
186.2 |
305.4 |
N14 |
C15 |
H6 |
H5 |
120.1 |
240.0 |
H7 |
C28 |
C27 |
H26 |
0.4 |
0.0 |
H8 |
C31 |
C26 |
C18 |
359.0 |
0.0 |
C17 |
C33 |
H9 |
H10 |
120.9 |
239.5 |
C34 |
C33 |
H9 |
H10 |
239.1 |
120.6 |
H9 |
C33 |
C34 |
H11 |
59.1 |
293.4 |
H9 |
C33 |
C34 |
H12 |
179.6 |
53.5 |
C17 |
C33 |
H10 |
H9 |
239.1 |
120.5 |
C34 |
C33 |
H10 |
H9 |
120.9 |
239.4 |
H10 |
C33 |
C34 |
H11 |
298.4 |
54.0 |
H10 |
C33 |
C34 |
H12 |
59.0 |
174.1 |
H11 |
C34 |
C33 |
H9 |
59.1 |
293.4 |
H11 |
C34 |
C33 |
H10 |
298.4 |
54.0 |
C33 |
C34 |
H11 |
H12 |
120.7 |
120.1 |
N14 |
C34 |
H11 |
H12 |
239.2 |
240.0 |
H12 |
C34 |
C33 |
H9 |
179.6 |
53.5 |
H12 |
C34 |
C33 |
H10 |
59.0 |
174.1 |
C33 |
C34 |
H12 |
H11 |
239.2 |
239.9 |
N14 |
C34 |
H12 |
H11 |
120.8 |
120.0 |
H14 |
C01 |
C02 |
C03 |
179.7 |
90.0 |
C02 |
C01 |
H14 |
H15 |
120.0 |
120.0 |
C02 |
C01 |
H14 |
H16 |
240.0 |
240.0 |
H15 |
C01 |
H14 |
H16 |
120.0 |
120.0 |
H15 |
C01 |
C02 |
C03 |
299.7 |
210.0 |
C02 |
C01 |
H15 |
H14 |
240.0 |
240.0 |
C02 |
C01 |
H15 |
H16 |
120.0 |
120.0 |
H14 |
C01 |
H15 |
H16 |
240.0 |
240.0 |
H16 |
C01 |
C02 |
C03 |
59.7 |
330.0 |
C02 |
C01 |
H16 |
H14 |
120.0 |
120.0 |
C02 |
C01 |
H16 |
H15 |
240.0 |
240.0 |
H14 |
C01 |
H16 |
H15 |
120.0 |
120.0 |
N06 |
C07 |
H18 |
C08 |
180.0 |
180.0 |
H18 |
C07 |
C08 |
H19 |
0.0 |
359.9 |
H19 |
C08 |
C07 |
H18 |
0.0 |
359.9 |
C17 |
C16 |
H21 |
H22 |
120.8 |
239.4 |
H21 |
C16 |
C15 |
H5 |
304.9 |
305.9 |
H21 |
C16 |
C15 |
H6 |
65.0 |
185.9 |
C17 |
C16 |
H22 |
H21 |
239.1 |
120.6 |
H22 |
C16 |
C15 |
H5 |
184.4 |
66.5 |
H22 |
C16 |
C15 |
H6 |
304.4 |
306.5 |
C19 |
C20 |
H23 |
C21 |
180.0 |
180.1 |
H23 |
C20 |
C21 |
H13 |
0.4 |
0.1 |
H24 |
C23 |
C22 |
F25 |
360.0 |
359.4 |
H25 |
C24 |
C23 |
H24 |
359.7 |
0.3 |
H26 |
C27 |
C28 |
H7 |
0.4 |
0.0 |
H27 |
C30 |
C31 |
H8 |
359.1 |
0.3 |