PDB Chemical Component E2I
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for E2I
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C6 |
N1 |
1.260 |
1.326 |
| N1 |
C2 |
1.305 |
1.323 |
| C3 |
C2 |
1.378 |
1.386 |
| C2 |
H2 |
1.080 |
1.080 |
| C4 |
C3 |
1.404 |
1.386 |
| C3 |
C13 |
1.474 |
1.507 |
| N5 |
C4 |
1.355 |
1.323 |
| C4 |
H4 |
1.080 |
1.080 |
| N5 |
C6 |
1.381 |
1.325 |
| S21 |
C6 |
1.727 |
1.762 |
| C15 |
C13 |
1.554 |
1.530 |
| C13 |
H13 |
1.100 |
1.089 |
| C13 |
H13A |
1.100 |
1.090 |
| C15 |
C17 |
1.529 |
1.530 |
| C15 |
H15 |
1.099 |
1.090 |
| C15 |
H15A |
1.100 |
1.090 |
| C17 |
C19 |
1.545 |
1.529 |
| C17 |
H17 |
1.100 |
1.090 |
| C17 |
H17A |
1.100 |
1.090 |
| C19 |
H19 |
1.100 |
1.090 |
| C19 |
H19A |
1.100 |
1.090 |
| C19 |
H19B |
1.100 |
1.090 |
| S21 |
C23 |
1.803 |
1.810 |
| C25 |
C23 |
1.530 |
1.507 |
| C23 |
H23 |
1.100 |
1.091 |
| C23 |
H23A |
1.100 |
1.090 |
| O27 |
C25 |
1.235 |
1.213 |
| C25 |
C29 |
1.503 |
1.471 |
| C29 |
C31 |
1.399 |
1.399 |
| C29 |
C35 |
1.402 |
1.398 |
| C31 |
C32 |
1.415 |
1.380 |
| C31 |
H31 |
1.080 |
1.079 |
| C32 |
C33 |
1.386 |
1.385 |
| C32 |
H32 |
1.080 |
1.079 |
| C34 |
C33 |
1.378 |
1.384 |
| C33 |
S42 |
1.797 |
1.762 |
| C35 |
C34 |
1.400 |
1.379 |
| C34 |
H34 |
1.080 |
1.080 |
| C35 |
H35 |
1.080 |
1.080 |
| N48 |
S42 |
1.698 |
1.656 |
| O46 |
S42 |
1.471 |
1.421 |
| S42 |
O44 |
1.474 |
1.421 |
| N48 |
HN48 |
1.000 |
0.970 |
| N48 |
HN4A |
1.000 |
0.970 |
Bond Angles for E2I
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| N1 |
C2 |
H2 |
117.3 |
120.4 |
| C3 |
C2 |
H2 |
117.3 |
120.4 |
| C4 |
C3 |
C13 |
128.7 |
120.7 |
| C3 |
C13 |
H13 |
111.2 |
109.5 |
| C3 |
C13 |
H13A |
111.2 |
109.4 |
| N5 |
C4 |
H4 |
123.5 |
120.4 |
| C15 |
C13 |
H13 |
111.2 |
109.5 |
| C15 |
C13 |
H13A |
111.2 |
109.4 |
| H13 |
C13 |
H13A |
107.7 |
109.5 |
| C17 |
C15 |
H15 |
108.3 |
109.4 |
| C17 |
C15 |
H15A |
108.3 |
109.4 |
| C15 |
C17 |
C19 |
113.8 |
109.5 |
| C15 |
C17 |
H17 |
108.1 |
109.5 |
| C15 |
C17 |
H17A |
108.0 |
109.4 |
| H15 |
C15 |
H15A |
110.7 |
109.5 |
| C19 |
C17 |
H17 |
108.1 |
109.5 |
| C19 |
C17 |
H17A |
108.1 |
109.5 |
| C17 |
C19 |
H19 |
109.5 |
109.5 |
| C17 |
C19 |
H19A |
109.4 |
109.5 |
| C17 |
C19 |
H19B |
109.4 |
109.5 |
| H17 |
C17 |
H17A |
110.9 |
109.4 |
| H19 |
C19 |
H19A |
109.5 |
109.4 |
| H19 |
C19 |
H19B |
109.4 |
109.5 |
| H19A |
C19 |
H19B |
109.5 |
109.5 |
| S21 |
C23 |
H23 |
110.2 |
109.5 |
| S21 |
C23 |
H23A |
110.2 |
109.5 |
| C25 |
C23 |
H23 |
110.2 |
109.4 |
| C25 |
C23 |
H23A |
110.2 |
109.5 |
| H23 |
C23 |
H23A |
108.8 |
109.4 |
| O27 |
C25 |
C29 |
116.5 |
120.1 |
| C25 |
C29 |
C31 |
120.4 |
120.1 |
| C25 |
C29 |
C35 |
119.2 |
120.2 |
| C31 |
C29 |
C35 |
120.4 |
119.7 |
| C29 |
C31 |
C32 |
117.4 |
119.8 |
| C29 |
C31 |
H31 |
121.3 |
120.1 |
| C29 |
C35 |
C34 |
120.6 |
119.8 |
| C29 |
C35 |
H35 |
119.7 |
120.1 |
| C32 |
C31 |
H31 |
121.3 |
120.1 |
| C31 |
C32 |
C33 |
122.0 |
120.1 |
| C31 |
C32 |
H32 |
119.0 |
119.9 |
| C33 |
C32 |
H32 |
119.0 |
119.9 |
| C32 |
C33 |
S42 |
121.6 |
119.8 |
| C34 |
C33 |
S42 |
118.4 |
119.9 |
| C33 |
S42 |
O44 |
104.8 |
106.4 |
| C35 |
C34 |
H34 |
120.2 |
119.9 |
| HN48 |
N48 |
HN4A |
109.5 |
120.0 |
Torsion Angles for E2I
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C6 |
N1 |
C2 |
H2 |
180.2 |
179.9 |
| C3 |
C2 |
N1 |
H2 |
180.0 |
180.0 |
| N1 |
C2 |
C3 |
H2 |
180.0 |
180.0 |
| C4 |
C3 |
C2 |
H2 |
180.0 |
180.0 |
| C4 |
C3 |
C13 |
H13 |
17.7 |
30.0 |
| C4 |
C3 |
C13 |
H13A |
137.6 |
150.1 |
| C13 |
C3 |
C2 |
H2 |
0.2 |
0.0 |
| C15 |
C13 |
C3 |
H13 |
240.0 |
240.0 |
| C15 |
C13 |
C3 |
H13A |
120.0 |
119.9 |
| H13 |
C13 |
C3 |
H13A |
240.0 |
239.9 |
| N5 |
C4 |
C3 |
C13 |
179.6 |
180.0 |
| H4 |
C4 |
C3 |
C13 |
359.7 |
360.0 |
| C6 |
N5 |
C4 |
H4 |
180.1 |
180.0 |
| C3 |
C13 |
C15 |
H13 |
120.0 |
120.0 |
| C3 |
C13 |
C15 |
H13A |
240.0 |
240.1 |
| H13 |
C13 |
C15 |
H13A |
120.0 |
120.0 |
| C3 |
C13 |
H13 |
H13A |
122.0 |
120.0 |
| C15 |
C13 |
H13 |
H13A |
238.0 |
240.0 |
| C3 |
C13 |
H13A |
H13 |
238.0 |
239.9 |
| C15 |
C13 |
H13A |
H13 |
122.0 |
120.0 |
| C17 |
C15 |
C13 |
H13 |
88.7 |
60.0 |
| C17 |
C15 |
C13 |
H13A |
328.7 |
300.0 |
| H15 |
C15 |
C17 |
H15A |
120.0 |
120.0 |
| C19 |
C17 |
C15 |
H17 |
240.0 |
240.0 |
| C19 |
C17 |
C15 |
H17A |
120.0 |
120.0 |
| C15 |
C17 |
C19 |
H19 |
180.0 |
300.0 |
| C15 |
C17 |
C19 |
H19A |
300.0 |
60.0 |
| C15 |
C17 |
C19 |
H19B |
60.0 |
180.0 |
| H17 |
C17 |
C15 |
H17A |
240.0 |
240.1 |
| H15 |
C15 |
C13 |
H13 |
208.6 |
180.0 |
| H15 |
C15 |
C13 |
H13A |
88.7 |
59.9 |
| C17 |
C15 |
H15 |
H15A |
241.5 |
240.1 |
| H15 |
C15 |
C17 |
C19 |
342.5 |
60.0 |
| H15 |
C15 |
C17 |
H17 |
102.5 |
180.0 |
| H15 |
C15 |
C17 |
H17A |
222.5 |
300.0 |
| H15A |
C15 |
C13 |
H13 |
328.7 |
300.0 |
| H15A |
C15 |
C13 |
H13A |
208.7 |
180.0 |
| C17 |
C15 |
H15A |
H15 |
118.5 |
119.9 |
| H15A |
C15 |
C17 |
C19 |
222.4 |
300.0 |
| H15A |
C15 |
C17 |
H17 |
342.4 |
60.1 |
| H15A |
C15 |
C17 |
H17A |
102.5 |
180.0 |
| C19 |
C17 |
C15 |
H15 |
342.5 |
60.0 |
| C19 |
C17 |
C15 |
H15A |
222.4 |
300.0 |
| C15 |
C17 |
C19 |
H17 |
120.0 |
120.0 |
| C15 |
C17 |
C19 |
H17A |
240.0 |
240.0 |
| H17 |
C17 |
C19 |
H17A |
120.0 |
120.0 |
| H19 |
C19 |
C17 |
H19A |
240.0 |
240.0 |
| H19 |
C19 |
C17 |
H19B |
120.0 |
120.0 |
| H19A |
C19 |
C17 |
H19B |
240.0 |
240.0 |
| H17 |
C17 |
C15 |
H15 |
102.5 |
180.0 |
| H17 |
C17 |
C15 |
H15A |
342.4 |
60.1 |
| C15 |
C17 |
H17 |
C19 |
236.5 |
240.0 |
| C15 |
C17 |
H17 |
H17A |
118.2 |
119.9 |
| C19 |
C17 |
H17 |
H17A |
241.7 |
240.0 |
| H17 |
C17 |
C19 |
H19 |
60.0 |
180.0 |
| H17 |
C17 |
C19 |
H19A |
180.0 |
300.0 |
| H17 |
C17 |
C19 |
H19B |
300.0 |
60.0 |
| H17A |
C17 |
C15 |
H15 |
222.5 |
300.0 |
| H17A |
C17 |
C15 |
H15A |
102.5 |
180.0 |
| C15 |
C17 |
H17A |
C19 |
123.5 |
120.0 |
| C15 |
C17 |
H17A |
H17 |
241.8 |
240.0 |
| C19 |
C17 |
H17A |
H17 |
118.3 |
120.0 |
| H17A |
C17 |
C19 |
H19 |
299.9 |
60.0 |
| H17A |
C17 |
C19 |
H19A |
60.0 |
180.0 |
| H17A |
C17 |
C19 |
H19B |
180.0 |
300.0 |
| H19 |
C19 |
C17 |
H17 |
60.0 |
180.0 |
| H19 |
C19 |
C17 |
H17A |
299.9 |
60.0 |
| C17 |
C19 |
H19 |
H19A |
120.0 |
120.0 |
| C17 |
C19 |
H19 |
H19B |
240.0 |
240.0 |
| H19A |
C19 |
H19 |
H19B |
120.1 |
120.0 |
| H19A |
C19 |
C17 |
H17 |
180.0 |
300.0 |
| H19A |
C19 |
C17 |
H17A |
60.0 |
180.0 |
| C17 |
C19 |
H19A |
H19 |
240.0 |
240.0 |
| C17 |
C19 |
H19A |
H19B |
120.0 |
120.0 |
| H19 |
C19 |
H19A |
H19B |
240.0 |
240.0 |
| H19B |
C19 |
C17 |
H17 |
300.0 |
60.0 |
| H19B |
C19 |
C17 |
H17A |
180.0 |
300.0 |
| C17 |
C19 |
H19B |
H19 |
120.0 |
120.0 |
| C17 |
C19 |
H19B |
H19A |
240.0 |
240.0 |
| H19 |
C19 |
H19B |
H19A |
120.1 |
120.0 |
| C25 |
C23 |
S21 |
H23 |
240.0 |
240.0 |
| C25 |
C23 |
S21 |
H23A |
120.0 |
120.1 |
| H23 |
C23 |
S21 |
H23A |
240.0 |
240.1 |
| S21 |
C23 |
C25 |
H23 |
120.0 |
120.0 |
| S21 |
C23 |
C25 |
H23A |
240.0 |
239.9 |
| H23 |
C23 |
C25 |
H23A |
120.0 |
119.9 |
| S21 |
C23 |
H23 |
H23A |
120.9 |
120.0 |
| C25 |
C23 |
H23 |
H23A |
239.1 |
240.0 |
| S21 |
C23 |
H23A |
H23 |
239.1 |
240.0 |
| C25 |
C23 |
H23A |
H23 |
120.9 |
120.0 |
| O27 |
C25 |
C23 |
H23 |
261.9 |
240.0 |
| O27 |
C25 |
C23 |
H23A |
141.9 |
120.0 |
| O27 |
C25 |
C29 |
C31 |
334.4 |
0.0 |
| O27 |
C25 |
C29 |
C35 |
154.4 |
179.7 |
| C29 |
C25 |
C23 |
H23 |
82.1 |
60.0 |
| C29 |
C25 |
C23 |
H23A |
322.1 |
300.1 |
| C31 |
C29 |
C25 |
C35 |
180.1 |
180.3 |
| C25 |
C29 |
C31 |
C32 |
179.8 |
180.0 |
| C25 |
C29 |
C31 |
H31 |
359.8 |
360.0 |
| C25 |
C29 |
C35 |
C34 |
179.5 |
179.8 |
| C25 |
C29 |
C35 |
H35 |
359.4 |
0.0 |
| C25 |
C29 |
C31 |
C35 |
179.9 |
179.7 |
| C31 |
C29 |
C35 |
C34 |
359.4 |
359.4 |
| C31 |
C29 |
C35 |
H35 |
179.4 |
179.7 |
| C32 |
C31 |
C29 |
H31 |
180.0 |
180.0 |
| C29 |
C31 |
C32 |
C33 |
1.2 |
360.0 |
| C29 |
C31 |
C32 |
H32 |
181.2 |
180.0 |
| C25 |
C29 |
C35 |
C31 |
180.1 |
180.3 |
| C35 |
C29 |
C31 |
C32 |
359.8 |
0.3 |
| C35 |
C29 |
C31 |
H31 |
179.8 |
180.3 |
| C29 |
C35 |
C34 |
H34 |
180.4 |
180.3 |
| C32 |
C31 |
C29 |
C35 |
359.8 |
0.3 |
| C29 |
C31 |
C32 |
H31 |
180.0 |
180.0 |
| C33 |
C32 |
C31 |
H32 |
180.0 |
180.0 |
| C31 |
C32 |
C33 |
S42 |
180.8 |
180.0 |
| H31 |
C31 |
C29 |
C35 |
179.8 |
180.3 |
| C29 |
C31 |
H31 |
C32 |
180.0 |
180.0 |
| H31 |
C31 |
C32 |
C33 |
181.2 |
180.0 |
| H31 |
C31 |
C32 |
H32 |
1.2 |
0.0 |
| C33 |
C32 |
C31 |
H31 |
181.2 |
180.0 |
| C31 |
C32 |
C33 |
H32 |
180.0 |
180.0 |
| C34 |
C33 |
C32 |
S42 |
177.8 |
180.0 |
| C32 |
C33 |
S42 |
O44 |
245.9 |
203.5 |
| H32 |
C32 |
C31 |
H31 |
1.2 |
0.0 |
| C31 |
C32 |
H32 |
C33 |
180.0 |
180.0 |
| H32 |
C32 |
C33 |
S42 |
0.8 |
359.9 |
| C29 |
C35 |
C34 |
C33 |
0.4 |
0.6 |
| C34 |
C33 |
C32 |
H32 |
178.6 |
180.0 |
| C32 |
C33 |
C34 |
S42 |
182.1 |
180.0 |
| C34 |
C33 |
S42 |
O44 |
68.0 |
23.5 |
| S42 |
C33 |
C32 |
H32 |
0.8 |
359.9 |
| C29 |
C35 |
C34 |
H35 |
180.0 |
180.3 |
| C35 |
C34 |
C33 |
S42 |
178.4 |
179.7 |
| H34 |
C34 |
C33 |
S42 |
358.4 |
0.0 |
| C29 |
C35 |
H35 |
C34 |
180.0 |
179.7 |
| H35 |
C35 |
C34 |
H34 |
0.5 |
0.0 |