PDB Chemical Component E1S
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for E1S
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C2 |
C1 |
1.514 |
1.507 |
| C14 |
C1 |
1.544 |
1.530 |
| C1 |
H1 |
1.100 |
1.090 |
| C1 |
H1A |
1.100 |
1.090 |
| C35 |
N1 |
1.464 |
1.465 |
| N1 |
C2 |
1.467 |
1.348 |
| N1 |
HN1 |
1.000 |
0.970 |
| C2 |
O2 |
1.207 |
1.212 |
| C3 |
C4 |
1.515 |
1.530 |
| C3 |
C35 |
1.535 |
1.529 |
| C3 |
H3 |
1.101 |
1.090 |
| C3 |
H3A |
1.100 |
1.090 |
| C13 |
N3 |
1.307 |
1.347 |
| N3 |
HN3 |
1.000 |
0.970 |
| N3 |
HN3A |
1.000 |
0.971 |
| C5 |
C4 |
1.489 |
1.507 |
| C4 |
H4 |
1.100 |
1.090 |
| C4 |
H4A |
1.100 |
1.090 |
| O7 |
C5 |
1.272 |
1.208 |
| C5 |
O6 |
1.272 |
1.342 |
| O5 |
C13 |
1.210 |
1.212 |
| O6 |
HO6 |
0.950 |
0.968 |
| C13 |
C35 |
1.522 |
1.507 |
| C14 |
C15 |
1.512 |
1.507 |
| C14 |
H14 |
1.100 |
1.090 |
| C14 |
H14A |
1.100 |
1.090 |
| C18 |
C15 |
1.490 |
1.384 |
| C15 |
C16 |
1.384 |
1.384 |
| C16 |
C17 |
1.505 |
1.380 |
| C16 |
H16 |
1.080 |
1.080 |
| C30 |
C17 |
1.389 |
1.395 |
| C17 |
H17 |
1.080 |
1.080 |
| C18 |
C31 |
1.371 |
1.380 |
| C18 |
H18 |
1.080 |
1.080 |
| C20 |
C19 |
1.428 |
1.348 |
| C30 |
C19 |
1.515 |
1.479 |
| C19 |
S23 |
1.753 |
1.759 |
| C20 |
C21 |
1.450 |
1.380 |
| C20 |
H20 |
1.080 |
1.081 |
| C21 |
C27 |
1.391 |
1.336 |
| C21 |
H21 |
1.080 |
1.080 |
| C27 |
S23 |
1.726 |
1.759 |
| C27 |
C24 |
1.517 |
1.507 |
| C24 |
H24 |
1.100 |
1.090 |
| C24 |
H24A |
1.100 |
1.090 |
| C24 |
H24B |
1.100 |
1.090 |
| C31 |
C30 |
1.461 |
1.395 |
| C31 |
H31 |
1.079 |
1.081 |
| C35 |
H35 |
1.100 |
1.090 |
Bond Angles for E1S
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C2 |
C1 |
H1 |
110.0 |
109.5 |
| C2 |
C1 |
H1A |
110.1 |
109.5 |
| C14 |
C1 |
H1 |
110.0 |
109.5 |
| C14 |
C1 |
H1A |
110.0 |
109.5 |
| H1 |
C1 |
H1A |
108.9 |
109.5 |
| C35 |
N1 |
HN1 |
118.3 |
120.0 |
| C2 |
N1 |
HN1 |
118.3 |
120.0 |
| N1 |
C2 |
O2 |
119.6 |
120.0 |
| C4 |
C3 |
C35 |
108.0 |
109.5 |
| C4 |
C3 |
H3 |
110.0 |
109.5 |
| C4 |
C3 |
H3A |
110.0 |
109.5 |
| C3 |
C4 |
H4 |
107.3 |
109.5 |
| C3 |
C4 |
H4A |
107.3 |
109.5 |
| C35 |
C3 |
H3 |
110.0 |
109.5 |
| C35 |
C3 |
H3A |
110.0 |
109.5 |
| C3 |
C35 |
C13 |
112.6 |
109.5 |
| C3 |
C35 |
H35 |
106.6 |
109.5 |
| H3 |
C3 |
H3A |
109.0 |
109.5 |
| C13 |
N3 |
HN3 |
120.0 |
120.0 |
| C13 |
N3 |
HN3A |
120.0 |
120.0 |
| HN3 |
N3 |
HN3A |
120.0 |
120.0 |
| C5 |
C4 |
H4 |
107.3 |
109.5 |
| C5 |
C4 |
H4A |
107.3 |
109.5 |
| H4 |
C4 |
H4A |
111.5 |
109.5 |
| C5 |
O6 |
HO6 |
109.5 |
117.0 |
| O5 |
C13 |
C35 |
120.5 |
120.0 |
| C13 |
C35 |
H35 |
108.8 |
109.4 |
| C15 |
C14 |
H14 |
108.8 |
109.5 |
| C15 |
C14 |
H14A |
108.8 |
109.4 |
| C14 |
C15 |
C16 |
119.3 |
119.9 |
| H14 |
C14 |
H14A |
110.1 |
109.5 |
| C15 |
C16 |
C17 |
118.5 |
120.2 |
| C15 |
C16 |
H16 |
120.8 |
119.9 |
| C17 |
C16 |
H16 |
120.7 |
120.0 |
| C16 |
C17 |
H17 |
120.3 |
120.1 |
| C30 |
C17 |
H17 |
120.3 |
120.1 |
| C31 |
C18 |
H18 |
120.2 |
119.9 |
| C18 |
C31 |
C30 |
120.5 |
119.9 |
| C18 |
C31 |
H31 |
119.7 |
120.0 |
| C20 |
C19 |
S23 |
111.8 |
109.5 |
| C21 |
C20 |
H20 |
124.3 |
122.7 |
| C20 |
C21 |
C27 |
111.5 |
115.1 |
| C20 |
C21 |
H21 |
124.3 |
122.4 |
| C27 |
C21 |
H21 |
124.2 |
122.5 |
| C21 |
C27 |
S23 |
114.3 |
109.7 |
| C21 |
C27 |
C24 |
126.8 |
125.1 |
| C27 |
C24 |
H24 |
109.5 |
109.5 |
| C27 |
C24 |
H24A |
109.4 |
109.4 |
| C27 |
C24 |
H24B |
109.5 |
109.4 |
| H24 |
C24 |
H24A |
109.4 |
109.5 |
| H24 |
C24 |
H24B |
109.5 |
109.5 |
| H24A |
C24 |
H24B |
109.5 |
109.6 |
Torsion Angles for E1S
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C14 |
C1 |
C2 |
H1 |
240.0 |
240.0 |
| C14 |
C1 |
C2 |
H1A |
120.0 |
120.0 |
| H1 |
C1 |
C2 |
H1A |
240.0 |
240.0 |
| C2 |
C1 |
C14 |
H1 |
120.0 |
120.0 |
| C2 |
C1 |
C14 |
H1A |
240.0 |
240.0 |
| H1 |
C1 |
C14 |
H1A |
120.0 |
120.0 |
| C2 |
C1 |
H1 |
H1A |
120.7 |
120.0 |
| C14 |
C1 |
H1 |
H1A |
239.3 |
240.0 |
| C2 |
C1 |
H1A |
H1 |
239.3 |
240.0 |
| C14 |
C1 |
H1A |
H1 |
120.7 |
120.0 |
| C2 |
N1 |
C35 |
HN1 |
180.0 |
180.0 |
| N1 |
C2 |
C1 |
H1 |
221.3 |
300.0 |
| N1 |
C2 |
C1 |
H1A |
341.3 |
60.0 |
| C35 |
N1 |
C2 |
HN1 |
180.0 |
180.0 |
| HN1 |
N1 |
C2 |
O2 |
177.4 |
180.0 |
| O2 |
C2 |
C1 |
H1 |
45.6 |
120.0 |
| O2 |
C2 |
C1 |
H1A |
165.6 |
240.0 |
| O2 |
C2 |
N1 |
HN1 |
177.4 |
180.0 |
| C35 |
C3 |
C4 |
H3 |
240.0 |
240.0 |
| C35 |
C3 |
C4 |
H3A |
120.0 |
120.0 |
| C4 |
C3 |
C35 |
C13 |
173.1 |
175.0 |
| C4 |
C3 |
C35 |
H35 |
53.8 |
55.0 |
| H3 |
C3 |
C4 |
H3A |
240.0 |
240.0 |
| C5 |
C4 |
C3 |
H4 |
240.0 |
240.0 |
| C5 |
C4 |
C3 |
H4A |
120.0 |
120.0 |
| H4 |
C4 |
C3 |
H4A |
240.0 |
240.0 |
| C3 |
C35 |
N1 |
HN1 |
306.3 |
335.0 |
| C4 |
C3 |
C35 |
H3 |
120.0 |
120.0 |
| C4 |
C3 |
C35 |
H3A |
240.0 |
240.0 |
| C35 |
C3 |
C4 |
H4 |
219.9 |
300.0 |
| C35 |
C3 |
C4 |
H4A |
339.9 |
60.0 |
| H3 |
C3 |
C35 |
H3A |
120.0 |
120.0 |
| O5 |
C13 |
C35 |
C3 |
340.9 |
120.0 |
| C13 |
C35 |
C3 |
H35 |
119.2 |
120.0 |
| C4 |
C3 |
H3 |
C35 |
241.2 |
240.0 |
| C4 |
C3 |
H3 |
H3A |
120.6 |
120.0 |
| H3 |
C3 |
C4 |
H4 |
340.0 |
60.0 |
| H3 |
C3 |
C4 |
H4A |
99.9 |
180.0 |
| C35 |
C3 |
H3 |
H3A |
239.4 |
240.0 |
| H3 |
C3 |
C35 |
C13 |
53.1 |
55.0 |
| H3 |
C3 |
C35 |
H35 |
293.8 |
295.0 |
| C4 |
C3 |
H3A |
C35 |
118.8 |
120.0 |
| C4 |
C3 |
H3A |
H3 |
239.4 |
240.0 |
| H3A |
C3 |
C4 |
H4 |
100.0 |
180.0 |
| H3A |
C3 |
C4 |
H4A |
219.9 |
300.0 |
| C35 |
C3 |
H3A |
H3 |
120.6 |
120.0 |
| H3A |
C3 |
C35 |
C13 |
293.1 |
295.0 |
| H3A |
C3 |
C35 |
H35 |
173.8 |
175.0 |
| C3 |
C35 |
C13 |
N3 |
160.1 |
300.0 |
| HN3 |
N3 |
C13 |
HN3A |
180.1 |
180.0 |
| C13 |
N3 |
HN3 |
HN3A |
179.9 |
180.0 |
| C13 |
N3 |
HN3A |
HN3 |
180.1 |
180.0 |
| C5 |
C4 |
C3 |
C35 |
99.9 |
180.0 |
| C5 |
C4 |
C3 |
H3 |
220.0 |
300.0 |
| C5 |
C4 |
C3 |
H3A |
340.0 |
60.0 |
| C3 |
C4 |
C5 |
H4 |
120.0 |
120.0 |
| C3 |
C4 |
C5 |
H4A |
240.0 |
240.0 |
| H4 |
C4 |
C5 |
H4A |
120.0 |
120.0 |
| H4 |
C4 |
C3 |
C35 |
219.9 |
300.0 |
| H4 |
C4 |
C3 |
H3 |
340.0 |
60.0 |
| H4 |
C4 |
C3 |
H3A |
100.0 |
180.0 |
| C3 |
C4 |
H4 |
H4A |
117.2 |
120.0 |
| C5 |
C4 |
H4 |
H4A |
242.7 |
240.0 |
| H4A |
C4 |
C3 |
C35 |
339.9 |
60.0 |
| H4A |
C4 |
C3 |
H3 |
99.9 |
180.0 |
| H4A |
C4 |
C3 |
H3A |
219.9 |
300.0 |
| C3 |
C4 |
H4A |
H4 |
242.8 |
240.0 |
| C5 |
C4 |
H4A |
H4 |
117.3 |
120.0 |
| O7 |
C5 |
C4 |
H4 |
258.8 |
240.0 |
| O7 |
C5 |
C4 |
H4A |
138.8 |
120.0 |
| O7 |
C5 |
O6 |
HO6 |
0.0 |
0.0 |
| O6 |
C5 |
C4 |
H4 |
79.2 |
60.0 |
| O6 |
C5 |
C4 |
H4A |
319.2 |
300.0 |
| C3 |
C35 |
C13 |
O5 |
340.9 |
120.0 |
| O5 |
C13 |
N3 |
HN3 |
0.0 |
0.0 |
| O5 |
C13 |
N3 |
HN3A |
180.0 |
180.0 |
| O5 |
C13 |
C35 |
H35 |
98.8 |
240.0 |
| C13 |
C35 |
N1 |
HN1 |
68.9 |
95.0 |
| C13 |
C35 |
C3 |
H3 |
53.1 |
55.0 |
| C13 |
C35 |
C3 |
H3A |
293.1 |
295.0 |
| C3 |
C35 |
C13 |
H35 |
242.1 |
240.0 |
| C35 |
C13 |
N3 |
HN3 |
180.9 |
180.0 |
| C35 |
C13 |
N3 |
HN3A |
0.8 |
360.0 |
| C15 |
C14 |
C1 |
H1 |
63.8 |
60.0 |
| C15 |
C14 |
C1 |
H1A |
303.8 |
300.0 |
| H14 |
C14 |
C15 |
H14A |
120.0 |
120.0 |
| C14 |
C15 |
C16 |
C17 |
178.0 |
180.0 |
| C14 |
C15 |
C16 |
H16 |
358.0 |
0.0 |
| H14 |
C14 |
C1 |
H1 |
183.8 |
180.0 |
| H14 |
C14 |
C1 |
H1A |
63.8 |
60.0 |
| C15 |
C14 |
H14 |
H14A |
240.9 |
240.0 |
| H14 |
C14 |
C15 |
C16 |
123.2 |
330.0 |
| H14A |
C14 |
C1 |
H1 |
303.8 |
300.0 |
| H14A |
C14 |
C1 |
H1A |
183.8 |
180.0 |
| C15 |
C14 |
H14A |
H14 |
119.1 |
120.0 |
| H14A |
C14 |
C15 |
C16 |
3.2 |
210.0 |
| C18 |
C15 |
C14 |
H14 |
301.2 |
149.8 |
| C18 |
C15 |
C14 |
H14A |
181.2 |
29.8 |
| C18 |
C15 |
C16 |
H16 |
180.0 |
180.3 |
| C16 |
C15 |
C14 |
H14 |
123.2 |
330.0 |
| C16 |
C15 |
C14 |
H14A |
3.2 |
210.0 |
| C17 |
C16 |
C15 |
H16 |
180.0 |
180.0 |
| C15 |
C16 |
C17 |
H17 |
181.9 |
180.0 |
| C15 |
C16 |
C17 |
H16 |
180.0 |
180.0 |
| C30 |
C17 |
C16 |
H17 |
180.0 |
180.1 |
| C15 |
C16 |
H16 |
C17 |
180.0 |
180.0 |
| H16 |
C16 |
C17 |
H17 |
1.9 |
360.0 |
| C30 |
C17 |
C16 |
H16 |
181.9 |
180.0 |
| C16 |
C17 |
C30 |
H17 |
180.0 |
179.9 |
| H17 |
C17 |
C16 |
H16 |
1.9 |
360.0 |
| H18 |
C18 |
C31 |
C30 |
177.9 |
180.0 |
| H18 |
C18 |
C31 |
H31 |
357.9 |
0.1 |
| C19 |
C30 |
C17 |
H17 |
359.3 |
0.0 |
| C18 |
C31 |
C30 |
C19 |
180.9 |
180.0 |
| C21 |
C27 |
S23 |
C19 |
359.9 |
360.0 |
| C21 |
C20 |
C19 |
S23 |
0.9 |
0.0 |
| C27 |
C21 |
C20 |
H21 |
180.0 |
180.0 |
| C20 |
C21 |
C27 |
S23 |
0.6 |
0.0 |
| C20 |
C21 |
C27 |
C24 |
178.0 |
180.0 |
| H20 |
C20 |
C19 |
S23 |
180.9 |
180.0 |
| H20 |
C20 |
C21 |
C27 |
179.1 |
180.0 |
| H20 |
C20 |
C21 |
H21 |
359.1 |
0.1 |
| C27 |
C21 |
C20 |
H20 |
179.1 |
180.0 |
| C20 |
C21 |
C27 |
H21 |
180.0 |
180.0 |
| C21 |
C27 |
C24 |
H24 |
182.7 |
90.0 |
| C21 |
C27 |
C24 |
H24A |
302.7 |
210.0 |
| C21 |
C27 |
C24 |
H24B |
62.7 |
330.1 |
| H21 |
C21 |
C20 |
H20 |
359.1 |
0.1 |
| C20 |
C21 |
H21 |
C27 |
180.0 |
179.9 |
| H21 |
C21 |
C27 |
S23 |
180.6 |
180.0 |
| H21 |
C21 |
C27 |
C24 |
358.0 |
359.9 |
| S23 |
C27 |
C21 |
H21 |
180.6 |
180.0 |
| C21 |
C27 |
S23 |
C24 |
177.6 |
179.9 |
| C24 |
C27 |
C21 |
H21 |
358.0 |
359.9 |
| C21 |
C27 |
C24 |
S23 |
182.7 |
180.1 |
| H24 |
C24 |
C27 |
H24A |
240.0 |
240.0 |
| H24 |
C24 |
C27 |
H24B |
120.0 |
120.0 |
| H24A |
C24 |
C27 |
H24B |
240.0 |
239.9 |
| C27 |
C24 |
H24 |
H24A |
120.0 |
120.0 |
| C27 |
C24 |
H24 |
H24B |
240.0 |
240.0 |
| H24A |
C24 |
H24 |
H24B |
120.0 |
120.1 |
| C27 |
C24 |
H24A |
H24 |
240.0 |
240.0 |
| C27 |
C24 |
H24A |
H24B |
120.0 |
120.0 |
| H24 |
C24 |
H24A |
H24B |
240.0 |
240.0 |
| C27 |
C24 |
H24B |
H24 |
120.0 |
120.0 |
| C27 |
C24 |
H24B |
H24A |
240.0 |
240.0 |
| H24 |
C24 |
H24B |
H24A |
120.0 |
120.0 |
| C31 |
C30 |
C17 |
H17 |
176.1 |
179.8 |
| C30 |
C31 |
C18 |
H18 |
177.9 |
180.0 |
| C18 |
C31 |
C30 |
H31 |
180.0 |
180.0 |
| H31 |
C31 |
C18 |
H18 |
357.9 |
0.1 |
| C18 |
C31 |
H31 |
C30 |
180.0 |
180.0 |
| H35 |
C35 |
N1 |
HN1 |
188.3 |
214.9 |
| H35 |
C35 |
C3 |
H3 |
293.8 |
295.0 |
| H35 |
C35 |
C3 |
H3A |
173.8 |
175.0 |
| C3 |
C35 |
H35 |
C13 |
121.7 |
120.0 |