PDB Chemical Component DZN

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for DZN

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
O6	C6	1.410	1.429
O6	H6	0.990	0.967
C6	C5	1.557	1.531
C6	H6C1	1.100	1.089
C6	H6C2	1.100	1.089
C5	O5	1.440	1.426
C5	C4	1.562	1.530
C5	H5	1.099	1.090
O5	C1	1.426	1.426
C4	O4	1.458	1.428
C4	C3	1.563	1.531
C4	H4	1.100	1.090
O4	HA	0.990	0.966
C3	O3	1.419	1.429
C3	C2	1.556	1.532
C3	H3	1.100	1.089
O3	HB	0.990	0.967
C2	O2	1.435	1.429
C2	C1	1.558	1.530
C2	H2	1.100	1.090
O2	HC	0.990	0.967
C1	O1	1.452	1.428
C1	H1	1.100	1.090
O1	C18	1.418	1.357
C18	C19	1.403	1.393
C18	C23	1.400	1.385
C19	C20	1.393	1.365
C19	H19	1.062	1.079
C20	C21	1.392	1.394
C20	H20	1.062	1.080
C21	C22	1.491	1.406
C21	C27	1.506	1.475
C22	C23	1.406	1.387
C22	O24	1.401	1.348
C23	H23	1.061	1.080
O24	C25	1.466	1.338
C25	C26	1.416	1.359
C25	H25	1.061	1.081
C26	C27	1.492	1.474
C26	C28	1.488	1.484
C27	O35	1.263	1.218
C28	C29	1.406	1.393
C28	C33	1.382	1.393
C29	C30	1.390	1.379
C29	H29	1.061	1.080
C30	C31	1.406	1.387
C30	H30	1.062	1.080
C31	O34	1.367	1.359
C31	C32	1.385	1.388
O34	H34	0.957	0.966
C32	C33	1.382	1.379
C32	H32	1.061	1.081
C33	H33	1.062	1.079

Bond Angles for DZN

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C6	O6	H6	109.5	106.7
O6	C6	C5	104.6	109.4
O6	C6	H6C1	110.7	109.5
O6	C6	H6C2	112.3	109.5
C5	C6	H6C1	110.7	109.5
C5	C6	H6C2	112.3	109.5
C6	C5	O5	110.8	109.4
C6	C5	C4	115.8	109.4
C6	C5	H5	105.9	109.4
H6C1	C6	H6C2	106.3	109.5
O5	C5	C4	114.6	109.8
O5	C5	H5	107.4	109.4
C5	O5	C1	115.7	107.6
C4	C5	H5	101.2	109.5
C5	C4	O4	110.8	109.6
C5	C4	C3	107.9	109.0
C5	C4	H4	111.0	109.6
O5	C1	C2	109.5	109.8
O5	C1	O1	116.8	109.4
O5	C1	H1	104.1	109.4
O4	C4	C3	112.9	109.6
O4	C4	H4	105.7	109.5
C4	O4	HA	109.5	106.8
C3	C4	H4	108.7	109.6
C4	C3	O3	113.0	109.7
C4	C3	C2	114.8	108.7
C4	C3	H3	102.6	109.7
O3	C3	C2	108.2	109.6
O3	C3	H3	110.0	109.5
C3	O3	HB	109.5	106.9
C2	C3	H3	108.0	109.6
C3	C2	O2	109.0	109.7
C3	C2	C1	109.4	109.0
C3	C2	H2	108.7	109.6
O2	C2	C1	105.9	109.5
O2	C2	H2	112.0	109.5
C2	O2	HC	109.5	106.8
C1	C2	H2	111.7	109.5
C2	C1	O1	108.8	109.4
C2	C1	H1	112.8	109.4
O1	C1	H1	104.9	109.4
C1	O1	C18	127.6	106.8
O1	C18	C19	117.2	119.7
O1	C18	C23	123.2	119.7
C19	C18	C23	119.6	120.6
C18	C19	C20	121.8	120.3
C18	C19	H19	119.1	119.8
C18	C23	C22	121.0	119.7
C18	C23	H23	119.5	120.1
C20	C19	H19	119.1	119.9
C19	C20	C21	120.5	119.7
C19	C20	H20	119.7	120.2
C21	C20	H20	119.8	120.1
C20	C21	C22	118.7	120.4
C20	C21	C27	121.5	121.6
C22	C21	C27	119.8	118.0
C21	C22	C23	118.4	119.1
C21	C22	O24	118.4	119.9
C21	C27	C26	118.5	116.3
C21	C27	O35	121.3	121.8
C23	C22	O24	123.2	120.9
C22	C23	H23	119.5	120.1
C22	O24	C25	122.7	122.7
O24	C25	C26	121.3	122.1
O24	C25	H25	119.3	118.9
C26	C25	H25	119.4	119.0
C25	C26	C27	119.3	118.4
C25	C26	C28	123.9	120.8
C27	C26	C28	116.8	120.8
C26	C27	O35	120.2	121.9
C26	C28	C29	121.4	120.1
C26	C28	C33	118.2	120.1
C29	C28	C33	120.3	119.9
C28	C29	C30	119.7	120.0
C28	C29	H29	120.1	120.0
C28	C33	C32	120.1	119.9
C28	C33	H33	119.9	120.1
C30	C29	H29	120.1	120.0
C29	C30	C31	119.1	120.1
C29	C30	H30	120.4	120.0
C31	C30	H30	120.4	120.0
C30	C31	O34	122.6	119.9
C30	C31	C32	120.6	120.1
O34	C31	C32	116.9	120.0
C31	O34	H34	120.0	106.8
C31	C32	C33	120.1	120.1
C31	C32	H32	119.9	120.0
C33	C32	H32	120.0	119.9
C32	C33	H33	119.9	120.0

Torsion Angles for DZN

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C5	C6	O6	H6C1	240.8	240.0
C5	C6	O6	H6C2	122.1	120.0
O6	C6	C5	O5	317.4	59.8
O6	C6	C5	C4	90.1	180.2
O6	C6	C5	H5	201.3	300.0
H6C1	C6	O6	H6C2	241.3	240.0
H6	O6	C6	C5	151.0	180.0
H6	O6	C6	H6C1	270.3	300.0
H6	O6	C6	H6C2	29.0	60.0
C5	C6	O6	H6	151.0	180.0
O6	C6	C5	H6C1	119.2	120.0
O6	C6	C5	H6C2	237.9	240.0
H6C1	C6	C5	H6C2	118.7	120.0
O5	C5	C6	C4	227.3	239.7
O5	C5	C6	H5	116.1	119.8
C6	C5	O5	C1	190.8	187.7
C4	C5	C6	H5	248.8	240.1
C6	C5	C4	O4	58.2	58.7
C6	C5	C4	C3	182.3	178.6
C6	C5	C4	H4	301.2	298.5
H6C1	C6	O6	H6	270.3	300.0
O6	C6	H6C1	C5	244.5	240.0
O6	C6	H6C1	H6C2	122.3	120.0
C5	C6	H6C1	H6C2	237.7	240.0
H6C1	C6	C5	O5	198.2	299.8
H6C1	C6	C5	C4	330.9	60.1
H6C1	C6	C5	H5	82.1	180.0
H6C2	C6	O6	H6	29.0	60.0
O6	C6	H6C2	C5	117.5	120.0
O6	C6	H6C2	H6C1	238.8	239.9
C5	C6	H6C2	H6C1	121.2	120.0
H6C2	C6	C5	O5	79.5	179.8
H6C2	C6	C5	C4	212.2	300.1
H6C2	C6	C5	H5	323.4	60.0
O5	C5	C6	H6C1	198.2	299.8
O5	C5	C6	H6C2	79.5	179.8
C6	C5	O5	C4	133.3	120.1
C6	C5	O5	H5	244.8	240.2
C4	C5	O5	H5	111.5	120.1
O5	C5	C4	O4	189.2	178.7
O5	C5	C4	C3	313.2	298.7
O5	C5	C4	H4	72.1	58.6
C5	O5	C1	C2	299.6	292.5
C5	O5	C1	O1	175.5	172.4
C5	O5	C1	H1	60.5	52.6
C4	C5	C6	H6C1	330.9	60.1
C4	C5	C6	H6C2	212.2	300.1
C6	C5	C4	O5	229.0	239.9
C6	C5	C4	H5	113.9	119.8
O5	C5	C4	H5	244.8	239.9
C4	C5	O5	C1	57.5	67.6
O4	C4	C5	C3	235.9	240.1
O4	C4	C5	H4	117.0	120.2
C5	C4	O4	HA	318.0	179.5
C3	C4	C5	H4	241.1	240.1
C5	C4	C3	O3	171.0	173.6
C5	C4	C3	C2	46.2	53.8
C5	C4	C3	H3	289.3	294.0
H5	C5	C6	H6C1	82.1	180.0
H5	C5	C6	H6C2	323.4	60.0
C6	C5	H5	O5	118.4	119.8
C6	C5	H5	C4	238.8	240.1
O5	C5	H5	C4	120.4	120.3
H5	C5	O5	C1	306.0	307.4
H5	C5	C4	O4	304.3	298.8
H5	C5	C4	C3	68.4	58.8
H5	C5	C4	H4	187.3	178.7
C1	O5	C5	C4	57.5	67.6
C1	O5	C5	H5	306.0	307.4
C3	C2	C1	O5	55.6	61.2
O2	C2	C1	O5	173.0	181.2
O5	C1	C2	H2	295.2	301.3
C2	C1	O5	O1	124.1	120.1
C2	C1	O5	H1	239.1	239.9
O1	C1	O5	H1	115.0	119.8
O5	C1	O1	C18	314.9	293.8
O4	C4	C5	H5	304.3	298.8
C5	C4	O4	C3	121.1	119.6
C5	C4	O4	H4	239.8	239.8
C3	C4	O4	H4	118.7	120.2
O4	C4	C3	O3	293.7	293.5
O4	C4	C3	C2	168.9	173.7
O4	C4	C3	H3	52.0	53.9
C3	C4	C5	H5	68.4	58.8
C5	C4	C3	O4	237.3	240.1
C5	C4	C3	H4	120.4	119.9
O4	C4	C3	H4	243.1	239.8
C3	C4	O4	HA	196.9	60.0
O3	C3	C4	C2	124.8	119.8
O3	C3	C4	H3	241.6	239.6
C4	C3	O3	HB	230.7	180.8
C2	C3	C4	H3	116.9	119.8
C4	C3	C2	O2	192.7	186.3
C4	C3	C2	C1	308.1	306.3
C4	C3	C2	H2	70.3	66.1
H4	C4	C5	H5	187.3	178.7
C5	C4	H4	O4	120.1	120.2
C5	C4	H4	C3	241.6	240.4
O4	C4	H4	C3	121.5	120.2
H4	C4	O4	HA	78.2	299.8
H4	C4	C3	O3	50.6	53.7
H4	C4	C3	C2	285.8	293.9
H4	C4	C3	H3	168.9	174.1
HA	O4	C4	C3	196.9	60.0
HA	O4	C4	H4	78.2	299.8
O3	C3	C4	H4	50.6	53.7
C4	C3	O3	C2	231.7	240.8
C4	C3	O3	H3	114.0	120.5
C2	C3	O3	H3	242.3	239.7
O3	C3	C2	O2	65.5	66.4
O3	C3	C2	C1	180.9	186.4
O3	C3	C2	H2	303.1	306.2
O5	C1	C2	C3	55.6	61.2
C2	C3	C4	H4	285.8	293.9
C4	C3	C2	O3	127.3	119.9
C4	C3	C2	H3	246.3	240.1
O3	C3	C2	H3	119.0	120.2
C2	C3	O3	HB	359.0	300.0
O2	C2	C3	C1	244.6	240.1
O2	C2	C3	H2	122.4	120.2
C3	C2	O2	HC	195.7	179.6
C1	C2	C3	H2	237.8	240.2
C3	C2	C1	O1	184.3	181.3
C3	C2	C1	H1	300.3	301.1
H3	C3	C4	H4	168.9	174.1
C4	C3	H3	O3	239.5	239.5
C4	C3	H3	C2	121.6	119.2
O3	C3	H3	C2	242.1	239.7
H3	C3	O3	HB	116.8	60.3
H3	C3	C2	O2	306.5	306.2
H3	C3	C2	C1	61.9	66.1
H3	C3	C2	H2	184.1	186.0
HB	O3	C3	C2	359.0	300.0
HB	O3	C3	H3	116.8	60.3
O5	C1	C2	O2	173.0	181.2
O2	C2	C3	H3	306.5	306.2
C3	C2	O2	C1	117.6	119.6
C3	C2	O2	H2	239.6	239.7
C1	C2	O2	H2	122.0	120.1
O2	C2	C1	O1	301.7	301.4
O2	C2	C1	H1	57.6	61.2
O5	C1	C2	O1	231.3	239.9
O5	C1	C2	H1	115.4	120.1
C1	C2	C3	H3	61.9	66.1
C3	C2	C1	O2	242.7	240.0
C3	C2	C1	H2	120.4	119.9
O2	C2	C1	H2	237.8	239.9
C1	C2	O2	HC	78.1	59.9
O1	C1	C2	H1	244.1	240.2
C2	C1	O1	C18	190.4	173.4
H2	C2	C3	H3	184.1	186.0
C3	C2	H2	O2	120.6	120.3
C3	C2	H2	C1	239.2	240.5
O2	C2	H2	C1	118.7	120.1
H2	C2	O2	HC	316.1	299.8
H2	C2	C1	O1	63.9	61.5
H2	C2	C1	H1	179.8	181.3
HC	O2	C2	C1	78.1	59.9
HC	O2	C2	H2	316.1	299.8
O5	C1	O1	C2	124.5	120.4
O5	C1	O1	H1	245.4	240.2
O1	C1	C2	H2	63.9	61.5
C2	C1	O1	H1	121.0	119.8
C1	O1	C18	C19	163.7	354.5
C1	O1	C18	C23	344.4	174.3
O5	C1	H1	C2	241.4	239.6
O5	C1	H1	O1	123.2	119.8
H1	C1	C2	H2	179.8	181.3
C2	C1	H1	O1	241.8	240.2
H1	C1	O1	C18	69.4	53.6
C18	O1	C1	H1	69.4	53.6
C19	C18	O1	C23	179.3	180.3
O1	C18	C19	C20	180.4	179.9
O1	C18	C19	H19	0.4	359.8
O1	C18	C23	C22	180.0	179.7
O1	C18	C23	H23	360.0	359.9
O1	C18	C19	C23	180.7	179.7
C19	C18	C23	C22	0.8	359.5
C19	C18	C23	H23	180.7	179.7
C20	C19	C18	H19	180.0	180.1
C18	C19	C20	C21	359.3	359.9
C18	C19	C20	H20	179.3	180.0
O1	C18	C23	C19	179.2	180.3
C23	C18	C19	C20	359.7	0.2
C23	C18	C19	H19	179.7	180.0
C21	C22	C23	C18	359.9	0.7
C18	C23	C22	O24	179.3	180.6
C22	C23	C18	H23	180.0	179.8
C20	C19	C18	C23	359.7	0.2
C18	C19	C20	H19	180.0	179.9
C21	C20	C19	H20	180.0	179.9
C19	C20	C21	C22	1.3	0.3
C19	C20	C21	C27	180.2	180.3
H19	C19	C18	C23	179.7	180.0
C18	C19	H19	C20	180.0	180.1
H19	C19	C20	C21	179.3	180.1
H19	C19	C20	H20	359.3	0.1
C21	C20	C19	H19	179.3	180.1
C19	C20	C21	H20	180.0	180.1
C22	C21	C20	C27	181.2	180.0
C20	C21	C22	C23	359.1	359.4
C20	C21	C22	O24	179.6	179.5
C20	C21	C27	C26	181.4	167.9
C20	C21	C27	O35	0.7	347.7
H20	C20	C19	H19	359.3	0.1
C19	C20	H20	C21	180.0	179.9
H20	C20	C21	C22	181.3	180.2
H20	C20	C21	C27	0.1	0.3
C18	C23	C22	C21	359.9	0.7
C22	C21	C20	H20	181.3	180.2
C20	C21	C22	C27	178.9	180.0
C22	C21	C27	C26	0.3	347.9
C22	C21	C27	O35	179.5	167.7
C23	C22	C21	O24	179.5	179.9
C21	C22	C23	H23	179.9	180.5
C21	C22	O24	C25	358.8	14.5
C27	C21	C20	H20	0.1	0.3
C20	C21	C27	C22	181.2	180.0
C27	C21	C22	C23	180.3	179.3
C27	C21	C22	O24	0.8	359.5
C25	C26	C27	C21	359.1	12.2
C21	C27	C26	C28	179.8	192.3
C26	C27	C21	O35	180.8	180.2
C18	C23	C22	H23	180.0	180.2
C23	C22	C21	C27	180.3	179.3
C21	C22	C23	O24	180.5	180.1
C23	C22	O24	C25	179.3	194.6
O24	C22	C21	C27	0.8	359.5
C21	C22	O24	C23	179.5	179.9
O24	C22	C23	H23	359.4	0.4
C22	O24	C25	C26	0.6	345.2
C22	O24	C25	H25	180.6	165.3
C18	C23	H23	C22	180.0	179.8
H23	C23	C22	O24	359.4	0.4
C26	C25	O24	H25	180.0	179.9
O24	C25	C26	C27	0.4	0.7
O24	C25	C26	C28	179.7	180.6
C21	C27	C26	C25	359.1	12.2
O24	C25	C26	H25	180.0	180.1
C27	C26	C25	C28	180.7	180.1
C25	C26	C27	O35	179.9	192.3
C25	C26	C28	C29	180.6	60.0
C25	C26	C28	C33	359.1	239.8
O24	C25	H25	C26	180.0	179.9
H25	C25	C26	C27	180.4	180.6
H25	C25	C26	C28	359.7	0.5
C21	C27	C26	O35	179.2	179.8
C27	C26	C25	H25	180.4	180.6
C25	C26	C27	C28	179.3	179.9
C27	C26	C28	C29	359.9	239.9
C27	C26	C28	C33	178.4	59.7
C28	C26	C25	H25	359.7	0.5
C25	C26	C28	C27	180.7	180.1
C28	C26	C27	O35	0.6	12.4
C29	C28	C26	C33	181.5	180.2
C26	C28	C29	C30	179.9	180.0
C26	C28	C29	H29	359.9	0.0
C26	C28	C33	C32	179.6	179.7
C26	C28	C33	H33	359.6	0.2
C21	C27	O35	C26	180.8	180.2
O35	C27	C26	C28	0.6	12.4
C26	C28	C29	C33	178.5	179.8
C29	C28	C33	C32	358.1	359.5
C29	C28	C33	H33	178.1	180.0
C30	C29	C28	H29	180.0	180.0
C28	C29	C30	C31	359.7	360.0
C28	C29	C30	H30	179.7	180.1
C26	C28	C33	C29	181.5	180.2
C33	C28	C29	C30	1.5	0.2
C33	C28	C29	H29	181.5	180.2
C31	C32	C33	C28	1.2	0.5
C28	C33	C32	H32	181.2	180.3
C32	C33	C28	H33	180.0	179.6
C30	C29	C28	C33	1.5	0.2
C28	C29	C30	H29	180.0	180.0
C31	C30	C29	H30	180.0	179.9
C29	C30	C31	O34	179.8	180.0
C29	C30	C31	C32	359.6	0.0
H29	C29	C28	C33	181.5	180.2
C28	C29	H29	C30	180.0	180.0
H29	C29	C30	C31	179.7	180.0
H29	C29	C30	H30	359.7	0.1
C31	C30	C29	H29	179.7	180.0
C29	C30	C31	H30	180.0	180.1
O34	C31	C30	C32	180.3	180.0
C30	C31	O34	H34	0.0	90.1
C30	C31	C32	C33	0.0	359.7
C30	C31	C32	H32	180.0	179.9
H30	C30	C29	H29	359.7	0.1
C29	C30	H30	C31	180.0	179.9
H30	C30	C31	O34	359.8	359.9
H30	C30	C31	C32	179.6	179.9
O34	C31	C30	H30	359.8	359.9
C30	C31	O34	C32	179.7	180.0
O34	C31	C32	C33	179.7	179.8
O34	C31	C32	H32	359.7	360.0
C28	C33	C32	C31	1.2	0.5
C32	C31	C30	H30	179.6	179.9
C30	C31	C32	O34	180.3	180.0
C32	C31	O34	H34	180.3	270.1
C33	C32	C31	H32	180.0	179.8
C31	C32	C33	H33	181.2	180.0
H34	O34	C31	C32	180.3	270.1
C28	C33	C32	H33	180.0	180.4
C31	C32	C33	H32	180.0	180.2
C31	C32	H32	C33	180.0	179.8
H32	C32	C33	H33	1.2	359.8
C28	C33	H33	C32	180.0	179.6
H33	C33	C32	H32	1.2	359.8