PDB Chemical Component DXG
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for DXG
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
O1B |
C1 |
1.249 |
1.275 |
O1A |
C1 |
1.271 |
1.275 |
C1 |
C2 |
1.494 |
1.507 |
C2 |
O2 |
1.444 |
1.429 |
C2 |
C3 |
1.506 |
1.530 |
C2 |
H21 |
1.115 |
1.091 |
O2 |
HO21 |
0.950 |
0.967 |
C3 |
O3 |
1.453 |
1.429 |
C3 |
C4 |
1.528 |
1.530 |
C3 |
H31 |
1.115 |
1.090 |
O3 |
HO31 |
0.950 |
0.967 |
C4 |
C5 |
1.537 |
1.531 |
C4 |
H41 |
1.116 |
1.090 |
C4 |
H42 |
1.115 |
1.089 |
O5 |
C5 |
1.422 |
1.429 |
O5 |
HO51 |
0.950 |
0.967 |
C5 |
C6 |
1.495 |
1.507 |
C5 |
H51 |
1.115 |
1.090 |
C6 |
O6A |
1.256 |
1.220 |
C6 |
O6B |
1.262 |
1.219 |
Bond Angles for DXG
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
O1B |
C1 |
O1A |
122.4 |
120.0 |
O1B |
C1 |
C2 |
115.8 |
120.0 |
O1A |
C1 |
C2 |
121.8 |
120.0 |
C1 |
C2 |
O2 |
107.4 |
109.5 |
C1 |
C2 |
C3 |
109.5 |
109.5 |
C1 |
C2 |
H21 |
111.0 |
109.5 |
O2 |
C2 |
C3 |
109.9 |
109.5 |
O2 |
C2 |
H21 |
110.5 |
109.5 |
C2 |
O2 |
HO21 |
107.4 |
106.8 |
C3 |
C2 |
H21 |
108.5 |
109.5 |
C2 |
C3 |
O3 |
109.0 |
109.5 |
C2 |
C3 |
C4 |
112.2 |
109.4 |
C2 |
C3 |
H31 |
109.5 |
109.5 |
O3 |
C3 |
C4 |
113.6 |
109.5 |
O3 |
C3 |
H31 |
107.9 |
109.5 |
C3 |
O3 |
HO31 |
109.0 |
106.8 |
C4 |
C3 |
H31 |
104.4 |
109.5 |
C3 |
C4 |
C5 |
114.3 |
109.4 |
C3 |
C4 |
H41 |
110.5 |
109.5 |
C3 |
C4 |
H42 |
110.5 |
109.5 |
C5 |
C4 |
H41 |
110.4 |
109.4 |
C5 |
C4 |
H42 |
110.5 |
109.5 |
C4 |
C5 |
O5 |
113.9 |
109.5 |
C4 |
C5 |
C6 |
112.9 |
109.4 |
C4 |
C5 |
H51 |
104.9 |
109.5 |
H41 |
C4 |
H42 |
99.8 |
109.5 |
C5 |
O5 |
HO51 |
113.8 |
106.8 |
O5 |
C5 |
C6 |
112.7 |
109.5 |
O5 |
C5 |
H51 |
105.2 |
109.5 |
C6 |
C5 |
H51 |
106.3 |
109.4 |
C5 |
C6 |
O6A |
118.3 |
119.9 |
C5 |
C6 |
O6B |
120.4 |
120.0 |
O6A |
C6 |
O6B |
121.3 |
120.0 |
Torsion Angles for DXG
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
O1A |
C1 |
O1B |
C2 |
181.8 |
180.0 |
O1B |
C1 |
C2 |
O2 |
10.4 |
185.0 |
O1B |
C1 |
C2 |
C3 |
251.0 |
65.0 |
O1B |
C1 |
C2 |
H21 |
131.3 |
305.0 |
O1B |
C1 |
O1A |
C2 |
178.1 |
180.0 |
O1A |
C1 |
C2 |
O2 |
188.5 |
5.0 |
O1A |
C1 |
C2 |
C3 |
69.2 |
245.0 |
O1A |
C1 |
C2 |
H21 |
309.5 |
125.0 |
O1B |
C1 |
C2 |
O1A |
181.8 |
180.0 |
O2 |
C2 |
C1 |
C3 |
119.3 |
120.0 |
O2 |
C2 |
C1 |
H21 |
239.1 |
240.0 |
C1 |
C2 |
O2 |
HO21 |
180.0 |
300.0 |
C3 |
C2 |
C1 |
H21 |
119.7 |
120.0 |
C1 |
C2 |
C3 |
O3 |
54.1 |
55.0 |
C1 |
C2 |
C3 |
C4 |
180.9 |
175.0 |
C1 |
C2 |
C3 |
H31 |
296.3 |
295.0 |
C1 |
C2 |
O2 |
C3 |
241.0 |
240.0 |
C1 |
C2 |
O2 |
H21 |
121.3 |
120.0 |
C3 |
C2 |
O2 |
H21 |
240.3 |
240.0 |
O2 |
C2 |
C3 |
O3 |
296.4 |
295.0 |
O2 |
C2 |
C3 |
C4 |
63.2 |
55.0 |
O2 |
C2 |
C3 |
H31 |
178.6 |
175.0 |
C1 |
C2 |
C3 |
O2 |
117.8 |
120.0 |
C1 |
C2 |
C3 |
H21 |
238.7 |
240.0 |
O2 |
C2 |
C3 |
H21 |
121.0 |
120.0 |
C3 |
C2 |
O2 |
HO21 |
299.1 |
60.0 |
O3 |
C3 |
C2 |
C4 |
233.2 |
240.0 |
O3 |
C3 |
C2 |
H31 |
117.8 |
120.0 |
C2 |
C3 |
O3 |
HO31 |
180.0 |
59.9 |
C4 |
C3 |
C2 |
H31 |
244.6 |
240.0 |
C2 |
C3 |
C4 |
C5 |
79.4 |
175.0 |
C2 |
C3 |
C4 |
H41 |
204.7 |
295.0 |
C2 |
C3 |
C4 |
H42 |
314.2 |
55.0 |
C1 |
C2 |
H21 |
O2 |
240.9 |
240.0 |
C1 |
C2 |
H21 |
C3 |
120.3 |
120.0 |
O2 |
C2 |
H21 |
C3 |
239.4 |
240.0 |
H21 |
C2 |
O2 |
HO21 |
58.8 |
180.0 |
H21 |
C2 |
C3 |
O3 |
175.4 |
175.0 |
H21 |
C2 |
C3 |
C4 |
302.2 |
295.0 |
H21 |
C2 |
C3 |
H31 |
57.6 |
55.0 |
HO21 |
O2 |
C2 |
C3 |
299.1 |
60.0 |
HO21 |
O2 |
C2 |
H21 |
58.8 |
180.0 |
O3 |
C3 |
C2 |
H21 |
175.4 |
175.0 |
C2 |
C3 |
O3 |
C4 |
125.9 |
120.0 |
C2 |
C3 |
O3 |
H31 |
241.1 |
240.0 |
C4 |
C3 |
O3 |
H31 |
115.2 |
120.0 |
O3 |
C3 |
C4 |
C5 |
203.7 |
295.0 |
O3 |
C3 |
C4 |
H41 |
329.0 |
55.0 |
O3 |
C3 |
C4 |
H42 |
78.4 |
175.0 |
C4 |
C3 |
C2 |
H21 |
302.2 |
295.0 |
C2 |
C3 |
C4 |
O3 |
235.7 |
240.0 |
C2 |
C3 |
C4 |
H31 |
118.5 |
120.0 |
O3 |
C3 |
C4 |
H31 |
242.8 |
240.0 |
C4 |
C3 |
O3 |
HO31 |
54.0 |
300.0 |
C5 |
C4 |
C3 |
H41 |
234.7 |
240.1 |
C5 |
C4 |
C3 |
H42 |
125.3 |
120.0 |
C3 |
C4 |
C5 |
O5 |
344.7 |
295.0 |
C3 |
C4 |
C5 |
C6 |
214.6 |
175.0 |
C3 |
C4 |
C5 |
H51 |
99.3 |
55.0 |
H41 |
C4 |
C3 |
H42 |
250.5 |
239.9 |
H31 |
C3 |
C2 |
H21 |
57.6 |
55.0 |
C2 |
C3 |
H31 |
O3 |
118.6 |
120.0 |
C2 |
C3 |
H31 |
C4 |
239.7 |
240.0 |
O3 |
C3 |
H31 |
C4 |
121.2 |
120.0 |
H31 |
C3 |
O3 |
HO31 |
298.8 |
180.0 |
H31 |
C3 |
C4 |
C5 |
321.0 |
55.0 |
H31 |
C3 |
C4 |
H41 |
86.2 |
175.0 |
H31 |
C3 |
C4 |
H42 |
195.7 |
295.0 |
HO31 |
O3 |
C3 |
C4 |
54.0 |
300.0 |
HO31 |
O3 |
C3 |
H31 |
298.8 |
180.0 |
C5 |
C4 |
C3 |
H31 |
321.0 |
55.0 |
C3 |
C4 |
C5 |
H41 |
125.3 |
120.0 |
C3 |
C4 |
C5 |
H42 |
234.7 |
240.0 |
H41 |
C4 |
C5 |
H42 |
109.4 |
120.0 |
C4 |
C5 |
O5 |
HO51 |
180.0 |
300.0 |
O5 |
C5 |
C4 |
C6 |
130.1 |
120.0 |
O5 |
C5 |
C4 |
H51 |
245.5 |
239.9 |
C6 |
C5 |
C4 |
H51 |
115.3 |
119.9 |
C4 |
C5 |
C6 |
O6A |
3.7 |
115.0 |
C4 |
C5 |
C6 |
O6B |
184.2 |
295.0 |
H41 |
C4 |
C3 |
H31 |
86.2 |
175.0 |
C3 |
C4 |
H41 |
C5 |
232.6 |
240.0 |
C3 |
C4 |
H41 |
H42 |
116.3 |
120.1 |
C5 |
C4 |
H41 |
H42 |
243.7 |
240.0 |
H41 |
C4 |
C5 |
O5 |
219.4 |
175.0 |
H41 |
C4 |
C5 |
C6 |
89.3 |
55.0 |
H41 |
C4 |
C5 |
H51 |
334.0 |
295.0 |
H42 |
C4 |
C3 |
H31 |
195.7 |
295.0 |
C3 |
C4 |
H42 |
C5 |
127.4 |
120.0 |
C3 |
C4 |
H42 |
H41 |
243.7 |
239.9 |
C5 |
C4 |
H42 |
H41 |
116.3 |
120.0 |
H42 |
C4 |
C5 |
O5 |
110.0 |
55.0 |
H42 |
C4 |
C5 |
C6 |
339.9 |
295.0 |
H42 |
C4 |
C5 |
H51 |
224.6 |
175.0 |
O5 |
C5 |
C4 |
H41 |
219.4 |
175.0 |
O5 |
C5 |
C4 |
H42 |
110.0 |
55.0 |
C4 |
C5 |
O5 |
C6 |
229.7 |
240.0 |
C4 |
C5 |
O5 |
H51 |
114.3 |
120.1 |
C6 |
C5 |
O5 |
H51 |
244.6 |
240.0 |
O5 |
C5 |
C6 |
O6A |
233.0 |
355.0 |
O5 |
C5 |
C6 |
O6B |
53.5 |
175.0 |
HO51 |
O5 |
C5 |
C6 |
310.3 |
60.0 |
HO51 |
O5 |
C5 |
H51 |
65.7 |
180.0 |
C6 |
C5 |
C4 |
H41 |
89.3 |
55.0 |
C6 |
C5 |
C4 |
H42 |
339.9 |
295.0 |
C4 |
C5 |
C6 |
O5 |
130.7 |
120.0 |
C4 |
C5 |
C6 |
H51 |
245.5 |
240.0 |
C6 |
C5 |
O5 |
HO51 |
310.3 |
60.0 |
O5 |
C5 |
C6 |
H51 |
114.8 |
120.0 |
O6A |
C6 |
C5 |
O6B |
179.5 |
180.0 |
H51 |
C5 |
C4 |
H41 |
334.0 |
295.0 |
H51 |
C5 |
C4 |
H42 |
224.6 |
175.0 |
C4 |
C5 |
H51 |
O5 |
239.6 |
240.0 |
C4 |
C5 |
H51 |
C6 |
119.8 |
120.0 |
H51 |
C5 |
O5 |
HO51 |
65.7 |
180.0 |
O5 |
C5 |
H51 |
C6 |
240.3 |
240.0 |
H51 |
C5 |
C6 |
O6A |
118.3 |
235.0 |
H51 |
C5 |
C6 |
O6B |
298.7 |
55.0 |
O6A |
C6 |
C5 |
H51 |
118.3 |
235.0 |
C5 |
C6 |
O6A |
O6B |
180.5 |
180.0 |
O6B |
C6 |
C5 |
H51 |
298.7 |
55.0 |
C5 |
C6 |
O6B |
O6A |
179.5 |
180.0 |