PDB Chemical Component DX4

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for DX4

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C4 C5 1.402 1.400
C4 N3 1.343 1.338
C4 N9 1.339 1.369
C5 C6 1.402 1.414
C5 N7 1.332 1.355
C6 N1 1.349 1.351
C6 S6 1.781 1.712
C8 N9 1.354 1.365
C8 N7 1.343 1.301
C8 H8 1.080 1.080
N1 C2 1.356 1.363
N1 H5 1.000 0.971
N2 C2 1.313 1.372
N2 HN2 1.001 0.970
N2 HN2A 1.000 0.970
N3 C2 1.348 1.315
N9 HN9 1.000 0.970

Bond Angles for DX4

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C5 C4 N3 119.1 119.7
C5 C4 N9 107.9 106.1
C4 C5 C6 119.1 118.6
C4 C5 N7 106.7 107.3
N3 C4 N9 133.0 134.2
C4 N3 C2 120.9 121.1
C4 N9 C8 107.5 107.5
C4 N9 HN9 126.3 126.2
C6 C5 N7 134.2 134.2
C5 C6 N1 119.2 118.4
C5 C6 S6 121.8 120.8
C5 N7 C8 108.9 109.3
N1 C6 S6 119.0 120.8
C6 N1 C2 120.3 120.4
C6 N1 H5 119.9 119.8
N9 C8 N7 109.0 109.8
N9 C8 H8 125.5 125.1
C8 N9 HN9 126.2 126.3
N7 C8 H8 125.5 125.1
C2 N1 H5 119.8 119.8
N1 C2 N2 120.0 119.1
N1 C2 N3 121.3 121.9
C2 N2 HN2 110.5 120.0
C2 N2 HN2A 124.7 120.0
N2 C2 N3 118.7 119.1
HN2 N2 HN2A 124.8 120.0

Torsion Angles for DX4

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
N3 C4 C5 N9 179.7 179.8
C5 C4 N3 C2 359.5 360.0
C5 C4 N9 C8 0.1 0.1
C5 C4 N9 HN9 180.1 180.0
C6 C5 C4 N7 180.4 180.0
C4 C5 C6 N1 0.5 0.1
C4 C5 C6 S6 179.1 179.9
C4 C5 N7 C8 0.2 359.6
C5 C4 N3 N9 180.3 180.2
N3 C4 C5 C6 360.0 360.0
N3 C4 C5 N7 179.6 180.0
N3 C4 N9 C8 180.4 180.3
N3 C4 N9 HN9 0.4 0.2
N1 C2 N3 C4 0.6 360.0
N2 C2 N3 C4 180.3 180.0
C5 C4 N9 N3 179.7 179.8
N9 C4 C5 C6 180.3 180.2
N9 C4 C5 N7 359.8 0.2
N9 C4 N3 C2 179.1 179.8
C4 N9 C8 N7 0.0 359.7
C4 N9 C8 H8 180.0 180.0
C8 N9 C4 HN9 180.0 180.1
C6 C5 C4 N3 360.0 360.0
C6 C5 C4 N9 180.3 180.2
C4 C5 C6 N7 179.4 180.0
C6 C5 N7 C8 179.7 179.6
N1 C6 C5 S6 181.4 180.1
C5 C6 N1 C2 359.6 359.9
C5 C6 N1 H5 179.6 180.0
N7 C5 C4 N3 179.6 180.0
N7 C5 C4 N9 359.8 0.2
C4 C5 N7 C6 180.5 180.0
N7 C5 C6 N1 181.0 180.1
N7 C5 C6 S6 359.6 359.9
N9 C8 N7 C5 359.9 0.4
C5 N7 C8 H8 179.9 180.1
N1 C6 C5 N7 181.0 180.1
C5 C6 N1 S6 178.6 179.9
C2 N1 C6 H5 180.0 179.9
C6 N1 C2 N2 180.1 180.1
C6 N1 C2 N3 359.9 0.1
S6 C6 C5 N7 359.6 359.9
C5 C6 S6 N1 181.4 180.1
S6 C6 N1 C2 181.0 180.0
S6 C6 N1 H5 0.9 0.1
C4 N9 C8 HN9 180.0 179.9
C5 N7 C8 N9 359.9 0.4
N7 C8 N9 H8 180.0 179.7
N9 C8 N7 H8 180.0 180.3
N7 C8 N9 HN9 180.0 179.8
N9 C8 H8 N7 180.0 179.7
H8 C8 N9 HN9 360.0 0.1
C4 N3 C2 N1 0.6 360.0
C2 N1 C6 S6 181.0 180.0
C6 N1 C2 H5 180.0 180.1
N1 C2 N2 HN2 180.0 0.0
N1 C2 N2 HN2A 360.0 180.0
N2 C2 N1 N3 180.2 180.0
H5 N1 C6 S6 0.9 0.1
C6 N1 H5 C2 180.0 179.9
H5 N1 C2 N2 0.2 360.0
H5 N1 C2 N3 179.9 180.0
C4 N3 C2 N2 180.3 180.0
N2 C2 N1 H5 0.2 360.0
N1 C2 N2 N3 179.8 180.0
HN2 N2 C2 HN2A 180.0 180.0
C2 N2 HN2 HN2A 180.0 180.0
HN2 N2 C2 N3 0.3 180.0
C2 N2 HN2A HN2 180.0 180.0
HN2A N2 C2 N3 180.2 0.0
C2 N3 C4 N9 179.1 179.8
N3 C2 N1 H5 179.9 180.0
N1 C2 N3 N2 180.2 180.0
N3 C2 N2 HN2 0.3 180.0
N3 C2 N2 HN2A 180.2 0.0
C4 N9 HN9 C8 180.0 180.1
HN9 N9 C8 N7 180.0 179.8
HN9 N9 C8 H8 360.0 0.1