PDB Chemical Component DU8

Ideal Model

Chemical Description

Name 3-[6-azanyl-9-[(2~{R},3~{R},4~{S},5~{R})-5-(azidomethyl)-3,4-bis(oxidanyl)oxolan-2-yl]purin-8-yl]sulfanylpropanoic acid
Formula C13 H16 N8 O5 S
Formal charge 0
Molecular weight 396.382 g/mol
Component type NON-POLYMER

Chemical features

Atom count 43
Chiral atom count 4
Chiral atoms C6 C7 C8 C9
Bond count 45
Aromatic bond count 10

Chemical Identifiers

Systematic name (OpenEye OEToolkits) 3-[6-azanyl-9-[(2~{R},3~{R},4~{S},5~{R})-5-(azidomethyl)-3,4-bis(oxidanyl)oxolan-2-yl]purin-8-yl]sulfanylpropanoic acid

Chemical Descriptors

Stereo SMILES (CACTVS) Nc1ncnc2n([C@@H]3O[C@H](CN=[N+]=[N-])[C@@H](O)[C@H]3O)c(SCCC(O)=O)nc12
SMILES (CACTVS) Nc1ncnc2n([CH]3O[CH](CN=[N+]=[N-])[CH](O)[CH]3O)c(SCCC(O)=O)nc12
Stereo SMILES (OpenEye) c1nc(c2c(n1)n(c(n2)SCCC(=O)O)[C@H]3[C@@H]([C@@H]([C@H](O3)CN=[N+]=[N-])O)O)N
InChI descriptor InChI=1S/C13H16N8O5S/c14-10-7-11(17-4-16-10)21(13(19-7)27-2-1-6(22)23)12-9(25)8(24)5(26-12)3-18-20-15/h4-5,8-9,12,24-25H,1-3H2,(H,22,23)(H2,14,16,17)/t5-,8-,9-,12-/m1/s1
InChIKey descriptor HSUVCMYSEUNGIN-JJNLEZRASA-N

Status Information

Last modified 2019-03-08
Created 2018-01-30
Release status REL
Model PDB code 6FMA
Processing site RCSB