PDB Chemical Component DTY

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for DTY

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N CA 1.468 1.442
N H 1.021 1.005
N H2 1.020 1.006
CA C 1.531 1.522
CA CB 1.511 1.534
CA HA 1.116 1.096
C O 1.225 1.227
C OXT   1.354
CB CG 1.524 1.510
CB HB2 1.115 1.097
CB HB3 1.115 1.098
CG CD1 1.393 1.385
CG CD2 1.390 1.385
CD1 CE1 1.379 1.395
CD1 HD1 1.104 1.087
CD2 CE2 1.392 1.396
CD2 HD2 1.102 1.087
CE1 CZ 1.387 1.395
CE1 HE1 1.103 1.087
CE2 CZ 1.372 1.394
CE2 HE2 1.102 1.086
CZ OH 1.375 1.361
OH HH 0.949 0.971
OXT HXT   0.981

Bond Angles for DTY

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
CA N H 106.2 119.0
CA N H2 113.5 119.0
N CA C 106.2 111.0
N CA CB 112.5 111.4
N CA HA 109.8 106.1
H N H2 113.3 120.6
C CA CB 110.2 110.0
C CA HA 112.3 106.9
CA C O 123.6 123.0
CA C OXT   114.8
CB CA HA 105.9 111.4
CA CB CG 110.0 112.9
CA CB HB2 112.0 110.4
CA CB HB3 112.0 110.1
O C OXT   122.2
C OXT HXT   114.9
CG CB HB2 112.0 108.0
CG CB HB3 112.0 109.7
CB CG CD1 119.2 119.3
CB CG CD2 121.0 119.3
HB2 CB HB3 98.4 105.3
CD1 CG CD2 119.7 121.3
CG CD1 CE1 122.1 119.3
CG CD1 HD1 119.5 121.2
CG CD2 CE2 117.6 119.3
CG CD2 HD2 121.1 121.2
CE1 CD1 HD1 118.4 119.5
CD1 CE1 CZ 118.0 120.0
CD1 CE1 HE1 120.7 119.6
CE2 CD2 HD2 121.3 119.5
CD2 CE2 CZ 122.3 120.0
CD2 CE2 HE2 119.6 119.6
CZ CE1 HE1 121.3 120.4
CE1 CZ CE2 120.2 120.0
CE1 CZ OH 117.5 120.0
CZ CE2 HE2 118.1 120.4
CE2 CZ OH 122.3 120.0
CZ OH HH 117.5 110.2

Torsion Angles for DTY

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
H N CA H2 125.2 166.5
C CA N CB 239.4 237.1
C CA N HA 121.6 115.8
N CA C O 93.1 34.8
N CA C OXT   214.3
CB CA N HA 242.3 238.7
N CA CB CG 167.6 158.2
N CA CB HB2 292.9 279.3
N CA CB HB3 42.4 35.1
CA N H H2 234.7 193.7
H N CA C 180.0 201.8
H N CA CB 300.6 324.7
H N CA HA 58.3 86.1
CA N H2 H 121.3 166.3
H2 N CA C 54.8 35.3
H2 N CA CB 175.4 158.2
H2 N CA HA 293.1 279.6
C CA N H 180.0 201.8
C CA N H2 54.8 35.3
N CA C CB 122.1 123.7
N CA C HA 239.9 244.8
CB CA C HA 117.8 121.1
C CA CB CG 285.9 281.7
C CA CB HB2 51.2 42.8
C CA CB HB3 160.7 158.6
O C CA OXT   180.5
CA C OXT HXT   180.4
CB CA N H 300.6 324.7
CB CA N H2 175.4 158.2
N CA CB C 241.6 236.5
N CA CB HA 120.0 118.2
C CA CB HA 238.4 241.6
CB CA C O 330.9 271.1
CB CA C OXT   90.7
CG CB CA HB2 234.7 238.9
CG CB CA HB3 125.2 123.1
CA CB CG CD1 287.9 270.0
CA CB CG CD2 107.4 90.0
HB2 CB CA HB3 250.5 244.2
HA CA N H 58.3 86.1
HA CA N H2 293.1 279.6
N CA HA C 118.0 118.5
N CA HA CB 238.2 238.7
C CA HA CB 120.3 120.2
HA CA C O 213.2 150.0
HA CA C OXT   329.6
HA CA CB CG 47.6 40.0
HA CA CB HB2 172.9 161.1
HA CA CB HB3 282.3 277.0
O C CA CB 330.9 271.1
O C CA HA 213.2 150.0
CA C O OXT   179.5
O C OXT HXT   359.9
OXT C CA CB   90.7
OXT C CA HA   329.6
CA C OXT O   180.5
CG CB CA HA 47.6 40.0
CA CB CG HB2 125.2 122.4
CA CB CG HB3 234.8 236.7
HB2 CB CG HB3 109.5 114.3
CD1 CG CB CD2 180.5 180.0
CB CG CD1 CE1 180.2 180.0
CB CG CD1 HD1 0.2 0.1
CB CG CD2 CE2 180.2 179.9
CB CG CD2 HD2 0.2 360.0
HB2 CB CA HA 172.9 161.1
CA CB HB2 CG 235.8 236.0
CA CB HB2 HB3 117.9 118.8
CG CB HB2 HB3 242.0 242.8
HB2 CB CG CD1 162.7 147.5
HB2 CB CG CD2 342.2 327.6
HB3 CB CA HA 282.3 277.0
CA CB HB3 CG 124.2 124.9
CA CB HB3 HB2 242.1 241.0
CG CB HB3 HB2 118.0 116.0
HB3 CB CG CD1 53.1 33.2
HB3 CB CG CD2 232.6 213.3
CD1 CG CB HB2 162.7 147.5
CD1 CG CB HB3 53.1 33.2
CB CG CD1 CD2 179.5 180.0
CD1 CG CD2 CE2 359.7 360.0
CD1 CG CD2 HD2 179.7 180.0
CE1 CD1 CG HD1 180.0 180.0
CG CD1 CE1 CZ 359.6 0.0
CG CD1 CE1 HE1 179.7 180.0
CD2 CG CB HB2 342.2 327.6
CD2 CG CB HB3 232.6 213.3
CB CG CD2 CD1 180.5 180.0
CD2 CG CD1 CE1 0.7 0.0
CD2 CG CD1 HD1 180.7 180.0
CE2 CD2 CG HD2 180.0 179.9
CG CD2 CE2 CZ 359.7 0.1
CG CD2 CE2 HE2 179.7 180.0
CE1 CD1 CG CD2 0.7 0.0
CG CD1 CE1 HD1 180.0 180.0
CZ CE1 CD1 HE1 180.0 180.0
CD1 CE1 CZ CE2 359.8 0.0
CD1 CE1 CZ OH 180.3 179.9
HD1 CD1 CG CD2 180.7 180.0
CG CD1 HD1 CE1 180.0 180.0
HD1 CD1 CE1 CZ 179.6 180.0
HD1 CD1 CE1 HE1 359.7 359.9
CG CD2 CE2 HD2 180.0 180.1
CE1 CZ CE2 CD2 0.6 359.9
CZ CE2 CD2 HE2 180.0 180.0
CD2 CE2 CZ OH 180.0 180.1
CG CD2 HD2 CE2 180.0 179.9
HD2 CD2 CE2 CZ 179.7 180.0
HD2 CD2 CE2 HE2 359.7 360.0
CZ CE1 CD1 HD1 179.6 180.0
CD1 CE1 CZ HE1 180.0 180.0
CD2 CE2 CZ CE1 0.6 359.9
CE1 CZ CE2 HE2 180.6 180.0
CE2 CZ CE1 OH 179.5 180.1
CE1 CZ OH HH 180.0 71.3
HE1 CE1 CD1 HD1 359.7 359.9
CD1 CE1 HE1 CZ 180.0 180.0
HE1 CE1 CZ CE2 179.7 180.1
HE1 CE1 CZ OH 0.3 359.9
CZ CE2 CD2 HD2 179.7 180.0
CD2 CE2 CZ HE2 180.0 180.0
CE2 CZ CE1 HE1 179.7 180.1
CE1 CZ CE2 OH 180.6 179.9
CE2 CZ OH HH 0.5 251.2
HE2 CE2 CD2 HD2 359.7 360.0
CD2 CE2 HE2 CZ 180.0 180.0
HE2 CE2 CZ OH 0.1 0.1
OH CZ CE1 HE1 0.3 359.9
CE1 CZ OH CE2 179.4 180.1
OH CZ CE2 HE2 0.1 0.1