PDB Chemical Component DTV
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for DTV
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
S1 |
C1 |
1.720 |
1.813 |
S1 |
H1 |
0.951 |
1.344 |
C1 |
C2 |
1.415 |
1.530 |
C1 |
H1C1 |
1.115 |
1.089 |
C1 |
H1C2 |
1.115 |
1.089 |
C2 |
O2 |
1.371 |
1.428 |
C2 |
C3 |
1.446 |
1.530 |
C2 |
H2 |
1.115 |
1.090 |
O2 |
HA |
0.950 |
0.967 |
C3 |
O3 |
1.107 |
1.428 |
C3 |
C4 |
1.457 |
1.530 |
C3 |
H3 |
1.115 |
1.090 |
O3 |
HB |
0.950 |
0.967 |
C4 |
S4 |
1.763 |
1.813 |
C4 |
H4C1 |
1.115 |
1.089 |
C4 |
H4C2 |
1.115 |
1.089 |
S4 |
H4 |
0.950 |
1.344 |
Bond Angles for DTV
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C1 |
S1 |
H1 |
92.8 |
100.0 |
S1 |
C1 |
C2 |
92.8 |
109.5 |
S1 |
C1 |
H1C1 |
118.8 |
109.5 |
S1 |
C1 |
H1C2 |
118.8 |
109.4 |
C2 |
C1 |
H1C1 |
118.8 |
109.5 |
C2 |
C1 |
H1C2 |
118.8 |
109.4 |
C1 |
C2 |
O2 |
105.2 |
109.5 |
C1 |
C2 |
C3 |
119.5 |
109.5 |
C1 |
C2 |
H2 |
108.3 |
109.4 |
H1C1 |
C1 |
H1C2 |
91.4 |
109.5 |
O2 |
C2 |
C3 |
106.6 |
109.5 |
O2 |
C2 |
H2 |
108.3 |
109.5 |
C2 |
O2 |
HA |
105.3 |
106.8 |
C3 |
C2 |
H2 |
108.4 |
109.4 |
C2 |
C3 |
O3 |
118.4 |
109.5 |
C2 |
C3 |
C4 |
113.0 |
109.5 |
C2 |
C3 |
H3 |
106.8 |
109.5 |
O3 |
C3 |
C4 |
104.3 |
109.5 |
O3 |
C3 |
H3 |
106.8 |
109.5 |
C3 |
O3 |
HB |
118.4 |
106.9 |
C4 |
C3 |
H3 |
106.8 |
109.4 |
C3 |
C4 |
S4 |
95.9 |
109.5 |
C3 |
C4 |
H4C1 |
117.5 |
109.5 |
C3 |
C4 |
H4C2 |
117.5 |
109.5 |
S4 |
C4 |
H4C1 |
117.5 |
109.5 |
S4 |
C4 |
H4C2 |
117.5 |
109.4 |
C4 |
S4 |
H4 |
95.9 |
100.0 |
H4C1 |
C4 |
H4C2 |
92.7 |
109.5 |
Torsion Angles for DTV
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
S1 |
H1C1 |
125.3 |
120.0 |
C2 |
C1 |
S1 |
H1C2 |
234.7 |
240.0 |
S1 |
C1 |
C2 |
O2 |
71.6 |
60.0 |
S1 |
C1 |
C2 |
C3 |
191.3 |
180.0 |
S1 |
C1 |
C2 |
H2 |
315.9 |
299.9 |
H1C1 |
C1 |
S1 |
H1C2 |
109.5 |
120.0 |
H1 |
S1 |
C1 |
C2 |
180.0 |
180.0 |
H1 |
S1 |
C1 |
H1C1 |
54.7 |
60.0 |
H1 |
S1 |
C1 |
H1C2 |
305.3 |
300.0 |
C2 |
C1 |
S1 |
H1 |
180.0 |
180.0 |
S1 |
C1 |
C2 |
H1C1 |
234.8 |
240.0 |
S1 |
C1 |
C2 |
H1C2 |
125.3 |
120.0 |
H1C1 |
C1 |
C2 |
H1C2 |
250.5 |
240.0 |
O2 |
C2 |
C1 |
C3 |
240.4 |
240.0 |
O2 |
C2 |
C1 |
H2 |
115.7 |
120.0 |
C1 |
C2 |
O2 |
HA |
180.0 |
60.1 |
C3 |
C2 |
C1 |
H2 |
235.3 |
240.1 |
C1 |
C2 |
C3 |
O3 |
47.0 |
300.0 |
C1 |
C2 |
C3 |
C4 |
284.6 |
180.0 |
C1 |
C2 |
C3 |
H3 |
167.4 |
60.0 |
H1C1 |
C1 |
S1 |
H1 |
54.7 |
60.0 |
S1 |
C1 |
H1C1 |
C2 |
111.5 |
120.0 |
S1 |
C1 |
H1C1 |
H1C2 |
235.7 |
240.0 |
C2 |
C1 |
H1C1 |
H1C2 |
124.3 |
120.0 |
H1C1 |
C1 |
C2 |
O2 |
196.9 |
180.0 |
H1C1 |
C1 |
C2 |
C3 |
316.5 |
300.0 |
H1C1 |
C1 |
C2 |
H2 |
81.2 |
60.0 |
H1C2 |
C1 |
S1 |
H1 |
305.3 |
300.0 |
S1 |
C1 |
H1C2 |
C2 |
248.5 |
240.0 |
S1 |
C1 |
H1C2 |
H1C1 |
124.2 |
120.0 |
C2 |
C1 |
H1C2 |
H1C1 |
235.7 |
240.0 |
H1C2 |
C1 |
C2 |
O2 |
306.3 |
300.0 |
H1C2 |
C1 |
C2 |
C3 |
66.0 |
60.0 |
H1C2 |
C1 |
C2 |
H2 |
190.6 |
180.0 |
O2 |
C2 |
C1 |
H1C1 |
196.9 |
180.0 |
O2 |
C2 |
C1 |
H1C2 |
306.3 |
300.0 |
C1 |
C2 |
O2 |
C3 |
127.9 |
120.1 |
C1 |
C2 |
O2 |
H2 |
244.3 |
240.0 |
C3 |
C2 |
O2 |
H2 |
116.4 |
120.0 |
O2 |
C2 |
C3 |
O3 |
165.9 |
60.0 |
O2 |
C2 |
C3 |
C4 |
43.5 |
300.0 |
O2 |
C2 |
C3 |
H3 |
286.4 |
180.0 |
C3 |
C2 |
C1 |
H1C1 |
316.5 |
300.0 |
C3 |
C2 |
C1 |
H1C2 |
66.0 |
60.0 |
C1 |
C2 |
C3 |
O2 |
241.1 |
240.0 |
C1 |
C2 |
C3 |
H2 |
124.7 |
119.9 |
O2 |
C2 |
C3 |
H2 |
243.6 |
240.0 |
C3 |
C2 |
O2 |
HA |
52.1 |
300.0 |
O3 |
C3 |
C2 |
C4 |
122.4 |
120.0 |
O3 |
C3 |
C2 |
H3 |
239.6 |
240.0 |
C2 |
C3 |
O3 |
HB |
180.0 |
300.0 |
C4 |
C3 |
C2 |
H3 |
117.2 |
120.0 |
C2 |
C3 |
C4 |
S4 |
292.4 |
180.0 |
C2 |
C3 |
C4 |
H4C1 |
167.1 |
300.0 |
C2 |
C3 |
C4 |
H4C2 |
57.6 |
60.0 |
H2 |
C2 |
C1 |
H1C1 |
81.2 |
60.0 |
H2 |
C2 |
C1 |
H1C2 |
190.6 |
180.0 |
C1 |
C2 |
H2 |
O2 |
113.7 |
120.0 |
C1 |
C2 |
H2 |
C3 |
228.9 |
240.0 |
O2 |
C2 |
H2 |
C3 |
115.3 |
120.0 |
H2 |
C2 |
O2 |
HA |
295.7 |
180.0 |
H2 |
C2 |
C3 |
O3 |
282.3 |
180.0 |
H2 |
C2 |
C3 |
C4 |
159.9 |
60.0 |
H2 |
C2 |
C3 |
H3 |
42.8 |
300.0 |
HA |
O2 |
C2 |
C3 |
52.1 |
300.0 |
HA |
O2 |
C2 |
H2 |
295.7 |
180.0 |
O3 |
C3 |
C2 |
H2 |
282.3 |
180.0 |
C2 |
C3 |
O3 |
C4 |
233.4 |
240.0 |
C2 |
C3 |
O3 |
H3 |
120.5 |
120.0 |
C4 |
C3 |
O3 |
H3 |
247.1 |
240.0 |
O3 |
C3 |
C4 |
S4 |
162.4 |
60.0 |
O3 |
C3 |
C4 |
H4C1 |
37.1 |
180.0 |
O3 |
C3 |
C4 |
H4C2 |
287.7 |
300.0 |
C4 |
C3 |
C2 |
H2 |
159.9 |
60.0 |
C2 |
C3 |
C4 |
O3 |
130.0 |
120.0 |
C2 |
C3 |
C4 |
H3 |
242.8 |
240.0 |
O3 |
C3 |
C4 |
H3 |
112.9 |
120.0 |
C4 |
C3 |
O3 |
HB |
306.7 |
60.1 |
S4 |
C4 |
C3 |
H4C1 |
125.3 |
240.0 |
S4 |
C4 |
C3 |
H4C2 |
234.7 |
120.0 |
C3 |
C4 |
S4 |
H4 |
180.0 |
180.0 |
H4C1 |
C4 |
C3 |
H4C2 |
109.4 |
240.0 |
H3 |
C3 |
C2 |
H2 |
42.8 |
300.0 |
C2 |
C3 |
H3 |
O3 |
232.4 |
240.0 |
C2 |
C3 |
H3 |
C4 |
121.2 |
120.0 |
O3 |
C3 |
H3 |
C4 |
248.8 |
240.0 |
H3 |
C3 |
O3 |
HB |
59.6 |
180.0 |
H3 |
C3 |
C4 |
S4 |
49.5 |
299.9 |
H3 |
C3 |
C4 |
H4C1 |
284.2 |
60.0 |
H3 |
C3 |
C4 |
H4C2 |
174.8 |
180.0 |
HB |
O3 |
C3 |
C4 |
306.7 |
60.1 |
HB |
O3 |
C3 |
H3 |
59.6 |
180.0 |
S4 |
C4 |
C3 |
H3 |
49.5 |
299.9 |
C3 |
C4 |
S4 |
H4C1 |
234.7 |
120.0 |
C3 |
C4 |
S4 |
H4C2 |
125.3 |
240.0 |
H4C1 |
C4 |
S4 |
H4C2 |
250.6 |
120.0 |
H4C1 |
C4 |
C3 |
H3 |
284.2 |
60.0 |
C3 |
C4 |
H4C1 |
S4 |
113.7 |
240.0 |
C3 |
C4 |
H4C1 |
H4C2 |
236.8 |
120.0 |
S4 |
C4 |
H4C1 |
H4C2 |
123.2 |
240.0 |
H4C1 |
C4 |
S4 |
H4 |
305.3 |
60.0 |
H4C2 |
C4 |
C3 |
H3 |
174.8 |
180.0 |
C3 |
C4 |
H4C2 |
S4 |
246.3 |
120.0 |
C3 |
C4 |
H4C2 |
H4C1 |
123.1 |
240.0 |
S4 |
C4 |
H4C2 |
H4C1 |
236.8 |
120.0 |
H4C2 |
C4 |
S4 |
H4 |
54.7 |
300.0 |
H4 |
S4 |
C4 |
H4C1 |
305.3 |
60.0 |
H4 |
S4 |
C4 |
H4C2 |
54.7 |
300.0 |