PDB Chemical Component DTT
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for DTT
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
S1 |
C1 |
1.827 |
1.813 |
S1 |
HS1 |
0.950 |
1.344 |
C1 |
C2 |
1.518 |
1.530 |
C1 |
H11 |
1.116 |
1.089 |
C1 |
H12 |
1.115 |
1.089 |
C2 |
O2 |
1.417 |
1.428 |
C2 |
C3 |
1.574 |
1.530 |
C2 |
H2 |
1.114 |
1.090 |
O2 |
HO2 |
0.950 |
0.967 |
C3 |
O3 |
1.435 |
1.428 |
C3 |
C4 |
1.540 |
1.530 |
C3 |
H3 |
1.115 |
1.090 |
O3 |
HO3 |
0.949 |
0.968 |
C4 |
S4 |
1.861 |
1.813 |
C4 |
H41 |
1.115 |
1.089 |
C4 |
H42 |
1.115 |
1.089 |
S4 |
HS2 |
0.950 |
1.344 |
Bond Angles for DTT
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C1 |
S1 |
HS1 |
117.0 |
100.0 |
S1 |
C1 |
C2 |
117.1 |
109.5 |
S1 |
C1 |
H11 |
109.5 |
109.4 |
S1 |
C1 |
H12 |
109.5 |
109.5 |
C2 |
C1 |
H11 |
109.5 |
109.4 |
C2 |
C1 |
H12 |
109.5 |
109.5 |
C1 |
C2 |
O2 |
105.0 |
109.5 |
C1 |
C2 |
C3 |
114.0 |
109.5 |
C1 |
C2 |
H2 |
109.2 |
109.4 |
H11 |
C1 |
H12 |
100.6 |
109.5 |
O2 |
C2 |
C3 |
108.4 |
109.5 |
O2 |
C2 |
H2 |
114.7 |
109.5 |
C2 |
O2 |
HO2 |
104.9 |
106.8 |
C3 |
C2 |
H2 |
105.7 |
109.4 |
C2 |
C3 |
O3 |
107.0 |
109.5 |
C2 |
C3 |
C4 |
113.3 |
109.5 |
C2 |
C3 |
H3 |
107.2 |
109.5 |
O3 |
C3 |
C4 |
104.6 |
109.5 |
O3 |
C3 |
H3 |
115.5 |
109.5 |
C3 |
O3 |
HO3 |
107.0 |
106.8 |
C4 |
C3 |
H3 |
109.4 |
109.4 |
C3 |
C4 |
S4 |
120.4 |
109.5 |
C3 |
C4 |
H41 |
108.3 |
109.5 |
C3 |
C4 |
H42 |
108.3 |
109.5 |
S4 |
C4 |
H41 |
108.2 |
109.4 |
S4 |
C4 |
H42 |
108.3 |
109.5 |
C4 |
S4 |
HS2 |
120.4 |
100.0 |
H41 |
C4 |
H42 |
101.7 |
109.5 |
Torsion Angles for DTT
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
S1 |
H11 |
234.7 |
120.0 |
C2 |
C1 |
S1 |
H12 |
125.3 |
240.0 |
S1 |
C1 |
C2 |
O2 |
281.5 |
300.0 |
S1 |
C1 |
C2 |
C3 |
163.0 |
180.0 |
S1 |
C1 |
C2 |
H2 |
44.9 |
60.1 |
H11 |
C1 |
S1 |
H12 |
250.6 |
120.0 |
HS1 |
S1 |
C1 |
C2 |
180.0 |
180.0 |
HS1 |
S1 |
C1 |
H11 |
305.3 |
60.0 |
HS1 |
S1 |
C1 |
H12 |
54.7 |
300.0 |
C2 |
C1 |
S1 |
HS1 |
180.0 |
180.0 |
S1 |
C1 |
C2 |
H11 |
125.3 |
240.0 |
S1 |
C1 |
C2 |
H12 |
234.7 |
120.0 |
H11 |
C1 |
C2 |
H12 |
109.4 |
240.0 |
O2 |
C2 |
C1 |
C3 |
118.5 |
120.0 |
O2 |
C2 |
C1 |
H2 |
236.5 |
240.0 |
C1 |
C2 |
O2 |
HO2 |
180.0 |
299.9 |
C3 |
C2 |
C1 |
H2 |
118.0 |
119.9 |
C1 |
C2 |
C3 |
O3 |
135.9 |
60.0 |
C1 |
C2 |
C3 |
C4 |
250.7 |
180.0 |
C1 |
C2 |
C3 |
H3 |
11.5 |
300.0 |
H11 |
C1 |
S1 |
HS1 |
305.3 |
60.0 |
S1 |
C1 |
H11 |
C2 |
230.4 |
120.0 |
S1 |
C1 |
H11 |
H12 |
115.2 |
240.0 |
C2 |
C1 |
H11 |
H12 |
244.8 |
120.0 |
H11 |
C1 |
C2 |
O2 |
156.2 |
60.0 |
H11 |
C1 |
C2 |
C3 |
37.7 |
300.0 |
H11 |
C1 |
C2 |
H2 |
279.6 |
180.0 |
H12 |
C1 |
S1 |
HS1 |
54.7 |
300.0 |
S1 |
C1 |
H12 |
C2 |
129.5 |
240.0 |
S1 |
C1 |
H12 |
H11 |
244.8 |
120.0 |
C2 |
C1 |
H12 |
H11 |
115.2 |
240.0 |
H12 |
C1 |
C2 |
O2 |
46.7 |
180.0 |
H12 |
C1 |
C2 |
C3 |
288.2 |
60.0 |
H12 |
C1 |
C2 |
H2 |
170.2 |
300.0 |
O2 |
C2 |
C1 |
H11 |
156.2 |
60.0 |
O2 |
C2 |
C1 |
H12 |
46.7 |
180.0 |
C1 |
C2 |
O2 |
C3 |
237.8 |
239.9 |
C1 |
C2 |
O2 |
H2 |
119.9 |
120.0 |
C3 |
C2 |
O2 |
H2 |
242.1 |
240.0 |
O2 |
C2 |
C3 |
O3 |
19.4 |
300.0 |
O2 |
C2 |
C3 |
C4 |
134.2 |
60.0 |
O2 |
C2 |
C3 |
H3 |
255.0 |
180.0 |
C3 |
C2 |
C1 |
H11 |
37.7 |
300.0 |
C3 |
C2 |
C1 |
H12 |
288.2 |
60.0 |
C1 |
C2 |
C3 |
O2 |
116.5 |
120.0 |
C1 |
C2 |
C3 |
H2 |
240.0 |
240.1 |
O2 |
C2 |
C3 |
H2 |
123.5 |
120.0 |
C3 |
C2 |
O2 |
HO2 |
302.3 |
60.0 |
O3 |
C3 |
C2 |
C4 |
245.2 |
240.0 |
O3 |
C3 |
C2 |
H3 |
124.4 |
120.0 |
C2 |
C3 |
O3 |
HO3 |
180.0 |
60.0 |
C4 |
C3 |
C2 |
H3 |
239.2 |
240.0 |
C2 |
C3 |
C4 |
S4 |
57.4 |
180.0 |
C2 |
C3 |
C4 |
H41 |
182.6 |
300.0 |
C2 |
C3 |
C4 |
H42 |
292.1 |
60.0 |
H2 |
C2 |
C1 |
H11 |
279.6 |
180.0 |
H2 |
C2 |
C1 |
H12 |
170.2 |
300.0 |
C1 |
C2 |
H2 |
O2 |
242.5 |
240.0 |
C1 |
C2 |
H2 |
C3 |
123.1 |
120.0 |
O2 |
C2 |
H2 |
C3 |
240.6 |
240.0 |
H2 |
C2 |
O2 |
HO2 |
60.2 |
180.0 |
H2 |
C2 |
C3 |
O3 |
255.9 |
180.0 |
H2 |
C2 |
C3 |
C4 |
10.6 |
300.0 |
H2 |
C2 |
C3 |
H3 |
131.5 |
60.0 |
HO2 |
O2 |
C2 |
C3 |
302.3 |
60.0 |
HO2 |
O2 |
C2 |
H2 |
60.2 |
180.0 |
O3 |
C3 |
C2 |
H2 |
255.9 |
180.0 |
C2 |
C3 |
O3 |
C4 |
120.5 |
120.0 |
C2 |
C3 |
O3 |
H3 |
240.8 |
240.0 |
C4 |
C3 |
O3 |
H3 |
120.3 |
120.0 |
O3 |
C3 |
C4 |
S4 |
173.6 |
300.0 |
O3 |
C3 |
C4 |
H41 |
298.8 |
60.0 |
O3 |
C3 |
C4 |
H42 |
48.3 |
180.0 |
C4 |
C3 |
C2 |
H2 |
10.6 |
300.0 |
C2 |
C3 |
C4 |
O3 |
243.8 |
240.0 |
C2 |
C3 |
C4 |
H3 |
119.5 |
120.0 |
O3 |
C3 |
C4 |
H3 |
235.7 |
240.0 |
C4 |
C3 |
O3 |
HO3 |
59.5 |
300.0 |
S4 |
C4 |
C3 |
H41 |
234.8 |
240.0 |
S4 |
C4 |
C3 |
H42 |
125.3 |
120.0 |
C3 |
C4 |
S4 |
HS2 |
180.0 |
180.0 |
H41 |
C4 |
C3 |
H42 |
250.5 |
240.0 |
H3 |
C3 |
C2 |
H2 |
131.5 |
60.0 |
C2 |
C3 |
H3 |
O3 |
119.1 |
120.0 |
C2 |
C3 |
H3 |
C4 |
236.7 |
240.0 |
O3 |
C3 |
H3 |
C4 |
117.6 |
120.0 |
H3 |
C3 |
O3 |
HO3 |
299.2 |
180.0 |
H3 |
C3 |
C4 |
S4 |
297.9 |
60.1 |
H3 |
C3 |
C4 |
H41 |
63.1 |
180.0 |
H3 |
C3 |
C4 |
H42 |
172.6 |
300.0 |
HO3 |
O3 |
C3 |
C4 |
59.5 |
300.0 |
HO3 |
O3 |
C3 |
H3 |
299.2 |
180.0 |
S4 |
C4 |
C3 |
H3 |
297.9 |
60.1 |
C3 |
C4 |
S4 |
H41 |
125.2 |
120.0 |
C3 |
C4 |
S4 |
H42 |
234.7 |
240.0 |
H41 |
C4 |
S4 |
H42 |
109.5 |
120.0 |
H41 |
C4 |
C3 |
H3 |
63.1 |
180.0 |
C3 |
C4 |
H41 |
S4 |
227.9 |
240.0 |
C3 |
C4 |
H41 |
H42 |
114.0 |
120.0 |
S4 |
C4 |
H41 |
H42 |
246.1 |
240.0 |
H41 |
C4 |
S4 |
HS2 |
54.7 |
60.0 |
H42 |
C4 |
C3 |
H3 |
172.6 |
300.0 |
C3 |
C4 |
H42 |
S4 |
132.1 |
120.0 |
C3 |
C4 |
H42 |
H41 |
246.0 |
240.0 |
S4 |
C4 |
H42 |
H41 |
113.9 |
120.0 |
H42 |
C4 |
S4 |
HS2 |
305.3 |
300.0 |
HS2 |
S4 |
C4 |
H41 |
54.7 |
60.0 |
HS2 |
S4 |
C4 |
H42 |
305.3 |
300.0 |