PDB Chemical Component DTH
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for DTH
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N |
CA |
1.467 |
1.469 |
| N |
H |
1.000 |
1.009 |
| N |
H2 |
1.000 |
1.009 |
| CA |
CB |
1.549 |
1.530 |
| CA |
C |
1.551 |
1.507 |
| CA |
HA |
1.100 |
1.090 |
| CB |
CG2 |
1.547 |
1.530 |
| CB |
OG1 |
1.433 |
1.430 |
| CB |
HB |
1.100 |
1.090 |
| CG2 |
HG21 |
1.100 |
1.090 |
| CG2 |
HG22 |
1.100 |
1.090 |
| CG2 |
HG23 |
1.100 |
1.090 |
| OG1 |
HG1 |
0.950 |
0.967 |
| C |
O |
1.227 |
1.209 |
| C |
OXT |
1.221 |
1.342 |
| OXT |
HXT |
0.950 |
0.967 |
Bond Angles for DTH
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CA |
N |
H |
109.5 |
106.7 |
| CA |
N |
H2 |
109.5 |
106.7 |
| N |
CA |
CB |
109.9 |
109.5 |
| N |
CA |
C |
108.9 |
109.5 |
| N |
CA |
HA |
110.0 |
109.5 |
| H |
N |
H2 |
109.4 |
106.7 |
| CB |
CA |
C |
110.8 |
109.5 |
| CB |
CA |
HA |
108.1 |
109.5 |
| CA |
CB |
CG2 |
112.6 |
109.5 |
| CA |
CB |
OG1 |
109.4 |
109.5 |
| CA |
CB |
HB |
107.0 |
109.5 |
| C |
CA |
HA |
109.1 |
109.4 |
| CA |
C |
O |
118.6 |
120.0 |
| CA |
C |
OXT |
118.0 |
120.0 |
| CG2 |
CB |
OG1 |
108.2 |
109.5 |
| CG2 |
CB |
HB |
108.2 |
109.5 |
| CB |
CG2 |
HG21 |
109.5 |
109.5 |
| CB |
CG2 |
HG22 |
109.5 |
109.4 |
| CB |
CG2 |
HG23 |
109.5 |
109.5 |
| OG1 |
CB |
HB |
111.5 |
109.5 |
| CB |
OG1 |
HG1 |
109.5 |
106.8 |
| HG21 |
CG2 |
HG22 |
109.5 |
109.4 |
| HG21 |
CG2 |
HG23 |
109.5 |
109.5 |
| HG22 |
CG2 |
HG23 |
109.4 |
109.5 |
| O |
C |
OXT |
123.4 |
120.0 |
| C |
OXT |
HXT |
109.5 |
120.0 |
Torsion Angles for DTH
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| H |
N |
CA |
H2 |
240.0 |
246.2 |
| CB |
CA |
N |
C |
121.5 |
120.0 |
| CB |
CA |
N |
HA |
241.1 |
240.0 |
| N |
CA |
CB |
CG2 |
179.7 |
60.0 |
| N |
CA |
CB |
OG1 |
59.4 |
300.0 |
| N |
CA |
CB |
HB |
298.5 |
180.0 |
| C |
CA |
N |
HA |
119.5 |
120.0 |
| N |
CA |
C |
O |
53.8 |
19.9 |
| N |
CA |
C |
OXT |
235.3 |
200.0 |
| CA |
N |
H |
H2 |
120.0 |
113.8 |
| H |
N |
CA |
CB |
346.7 |
306.2 |
| H |
N |
CA |
C |
225.2 |
186.2 |
| H |
N |
CA |
HA |
105.6 |
66.2 |
| CA |
N |
H2 |
H |
239.9 |
246.3 |
| H2 |
N |
CA |
CB |
106.7 |
60.0 |
| H2 |
N |
CA |
C |
345.2 |
300.0 |
| H2 |
N |
CA |
HA |
225.6 |
180.0 |
| CB |
CA |
N |
H |
346.7 |
306.2 |
| CB |
CA |
N |
H2 |
106.7 |
60.0 |
| N |
CA |
CB |
C |
239.6 |
240.0 |
| N |
CA |
CB |
HA |
120.1 |
120.0 |
| C |
CA |
CB |
HA |
240.5 |
240.0 |
| CB |
CA |
C |
O |
292.8 |
259.9 |
| CB |
CA |
C |
OXT |
114.3 |
80.0 |
| CG2 |
CB |
CA |
OG1 |
120.4 |
120.0 |
| CG2 |
CB |
CA |
HB |
241.3 |
240.0 |
| CA |
CB |
CG2 |
HG21 |
289.2 |
180.0 |
| CA |
CB |
CG2 |
HG22 |
49.2 |
300.0 |
| CA |
CB |
CG2 |
HG23 |
169.2 |
60.0 |
| OG1 |
CB |
CA |
HB |
120.9 |
120.0 |
| CA |
CB |
OG1 |
HG1 |
158.7 |
180.0 |
| C |
CA |
N |
H |
225.2 |
186.2 |
| C |
CA |
N |
H2 |
345.2 |
300.0 |
| N |
CA |
C |
CB |
121.0 |
120.0 |
| N |
CA |
C |
HA |
239.9 |
240.0 |
| CB |
CA |
C |
HA |
118.9 |
120.0 |
| C |
CA |
CB |
CG2 |
300.2 |
180.0 |
| C |
CA |
CB |
OG1 |
179.8 |
60.0 |
| C |
CA |
CB |
HB |
58.9 |
300.0 |
| O |
C |
CA |
OXT |
178.5 |
180.0 |
| CA |
C |
OXT |
HXT |
178.4 |
179.9 |
| HA |
CA |
N |
H |
105.6 |
66.2 |
| HA |
CA |
N |
H2 |
225.6 |
180.0 |
| N |
CA |
HA |
CB |
240.0 |
240.0 |
| N |
CA |
HA |
C |
119.4 |
120.0 |
| CB |
CA |
HA |
C |
239.4 |
240.0 |
| HA |
CA |
CB |
CG2 |
59.7 |
300.0 |
| HA |
CA |
CB |
OG1 |
299.3 |
180.0 |
| HA |
CA |
CB |
HB |
178.4 |
60.0 |
| HA |
CA |
C |
O |
173.9 |
139.9 |
| HA |
CA |
C |
OXT |
355.4 |
320.0 |
| CG2 |
CB |
CA |
C |
300.2 |
180.0 |
| CG2 |
CB |
CA |
HA |
59.7 |
300.0 |
| CA |
CB |
CG2 |
OG1 |
238.9 |
240.0 |
| CA |
CB |
CG2 |
HB |
118.0 |
120.1 |
| OG1 |
CB |
CG2 |
HB |
239.1 |
240.0 |
| CG2 |
CB |
OG1 |
HG1 |
35.7 |
60.0 |
| HG21 |
CG2 |
CB |
HG22 |
240.0 |
240.0 |
| HG21 |
CG2 |
CB |
HG23 |
120.0 |
120.0 |
| HG22 |
CG2 |
CB |
HG23 |
240.0 |
240.0 |
| OG1 |
CB |
CA |
C |
179.8 |
60.0 |
| OG1 |
CB |
CA |
HA |
299.3 |
180.0 |
| CA |
CB |
OG1 |
CG2 |
123.0 |
120.0 |
| CA |
CB |
OG1 |
HB |
241.9 |
240.0 |
| CG2 |
CB |
OG1 |
HB |
118.9 |
120.0 |
| OG1 |
CB |
CG2 |
HG21 |
50.2 |
300.0 |
| OG1 |
CB |
CG2 |
HG22 |
170.2 |
60.0 |
| OG1 |
CB |
CG2 |
HG23 |
290.2 |
180.0 |
| HB |
CB |
CA |
C |
58.9 |
300.0 |
| HB |
CB |
CA |
HA |
178.4 |
60.0 |
| CA |
CB |
HB |
CG2 |
238.4 |
240.0 |
| CA |
CB |
HB |
OG1 |
119.5 |
120.0 |
| CG2 |
CB |
HB |
OG1 |
241.1 |
240.0 |
| HB |
CB |
CG2 |
HG21 |
171.2 |
60.0 |
| HB |
CB |
CG2 |
HG22 |
291.2 |
180.0 |
| HB |
CB |
CG2 |
HG23 |
51.2 |
300.0 |
| HB |
CB |
OG1 |
HG1 |
276.8 |
300.0 |
| HG21 |
CG2 |
CB |
OG1 |
50.2 |
300.0 |
| HG21 |
CG2 |
CB |
HB |
171.2 |
60.0 |
| CB |
CG2 |
HG21 |
HG22 |
120.0 |
120.0 |
| CB |
CG2 |
HG21 |
HG23 |
240.0 |
240.0 |
| HG22 |
CG2 |
HG21 |
HG23 |
120.0 |
120.0 |
| HG22 |
CG2 |
CB |
OG1 |
170.2 |
60.0 |
| HG22 |
CG2 |
CB |
HB |
291.2 |
180.0 |
| CB |
CG2 |
HG22 |
HG21 |
240.0 |
240.0 |
| CB |
CG2 |
HG22 |
HG23 |
120.0 |
120.0 |
| HG21 |
CG2 |
HG22 |
HG23 |
240.0 |
240.0 |
| HG23 |
CG2 |
CB |
OG1 |
290.2 |
180.0 |
| HG23 |
CG2 |
CB |
HB |
51.2 |
300.0 |
| CB |
CG2 |
HG23 |
HG21 |
120.0 |
120.0 |
| CB |
CG2 |
HG23 |
HG22 |
240.0 |
240.0 |
| HG21 |
CG2 |
HG23 |
HG22 |
120.0 |
120.0 |
| HG1 |
OG1 |
CB |
HB |
276.8 |
300.0 |
| O |
C |
CA |
HA |
173.9 |
139.9 |
| CA |
C |
O |
OXT |
181.6 |
180.0 |
| O |
C |
OXT |
HXT |
360.0 |
359.9 |
| OXT |
C |
CA |
HA |
355.4 |
320.0 |
| CA |
C |
OXT |
O |
178.4 |
180.0 |