PDB Chemical Component DTD

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for DTD

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
S1	C1	1.804	1.814
S1	S4	1.984	2.051
C1	C2	1.510	1.525
C1	H11	1.115	1.090
C1	H12	1.115	1.090
C2	O2	1.418	1.430
C2	C3	1.514	1.521
C2	H21	1.116	1.090
O2	HO2	0.950	0.967
C3	O3	1.403	1.430
C3	C4	1.577	1.525
C3	H31	1.114	1.089
O3	HO3	0.950	0.967
C4	S4	1.793	1.814
C4	H41	1.114	1.091
C4	H42	1.116	1.090

Bond Angles for DTD

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C1	S1	S4	99.6	99.8
S1	C1	C2	113.6	109.7
S1	C1	H11	110.7	109.4
S1	C1	H12	110.7	109.4
S1	S4	C4	102.3	99.8
C2	C1	H11	110.7	109.5
C2	C1	H12	110.7	109.4
C1	C2	O2	107.4	109.2
C1	C2	C3	117.7	110.9
C1	C2	H21	105.1	109.2
H11	C1	H12	99.6	109.4
O2	C2	C3	109.1	109.2
O2	C2	H21	114.4	109.2
C2	O2	HO2	107.4	106.8
C3	C2	H21	103.4	109.2
C2	C3	O3	110.2	109.1
C2	C3	C4	110.6	110.9
C2	C3	H31	107.1	109.3
O3	C3	C4	105.9	109.2
O3	C3	H31	111.7	109.1
C3	O3	HO3	110.2	106.8
C4	C3	H31	111.3	109.2
C3	C4	S4	106.8	109.7
C3	C4	H41	113.2	109.4
C3	C4	H42	113.2	109.5
S4	C4	H41	113.2	109.4
S4	C4	H42	113.2	109.4
H41	C4	H42	97.3	109.4

Torsion Angles for DTD

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C1	S1	S4	C4	57.1	54.5
C2	C1	S1	H11	234.7	120.1
C2	C1	S1	H12	125.2	240.0
S1	C1	C2	O2	183.6	192.2
S1	C1	C2	C3	60.1	71.8
S1	C1	C2	H21	305.8	311.5
H11	C1	S1	H12	250.5	119.8
S4	S1	C1	C2	305.5	297.8
S4	S1	C1	H11	70.8	177.7
S4	S1	C1	H12	180.3	57.8
C3	C4	S4	S1	292.5	297.8
S1	S4	C4	H41	167.3	57.9
S1	S4	C4	H42	57.7	177.7
C2	C1	S1	S4	305.5	297.8
S1	C1	C2	H11	125.3	239.9
S1	C1	C2	H12	234.8	120.0
H11	C1	C2	H12	109.5	240.1
O2	C2	C1	C3	123.4	120.3
O2	C2	C1	H21	237.8	240.7
C1	C2	O2	HO2	179.9	59.3
C3	C2	C1	H21	114.3	120.4
C1	C2	C3	O3	178.1	165.0
C1	C2	C3	C4	295.0	285.3
C1	C2	C3	H31	56.4	45.8
H11	C1	S1	S4	70.8	177.7
S1	C1	H11	C2	233.1	120.3
S1	C1	H11	H12	116.5	240.2
C2	C1	H11	H12	243.4	119.9
H11	C1	C2	O2	58.3	312.3
H11	C1	C2	C3	294.8	191.9
H11	C1	C2	H21	180.5	71.6
H12	C1	S1	S4	180.3	57.8
S1	C1	H12	C2	126.8	239.8
S1	C1	H12	H11	243.5	119.9
C2	C1	H12	H11	116.6	240.1
H12	C1	C2	O2	308.8	72.2
H12	C1	C2	C3	185.3	311.8
H12	C1	C2	H21	71.0	191.4
O2	C2	C1	H11	58.3	312.3
O2	C2	C1	H12	308.8	72.2
C1	C2	O2	C3	231.4	238.6
C1	C2	O2	H21	116.3	119.3
C3	C2	O2	H21	244.8	240.6
O2	C2	C3	O3	55.5	44.7
O2	C2	C3	C4	172.4	165.0
O2	C2	C3	H31	293.8	285.4
C3	C2	C1	H11	294.8	191.9
C3	C2	C1	H12	185.3	311.8
C1	C2	C3	O2	122.6	120.3
C1	C2	C3	H21	244.7	239.7
O2	C2	C3	H21	122.1	119.3
C3	C2	O2	HO2	308.5	180.6
O3	C3	C2	C4	243.2	239.7
O3	C3	C2	H31	121.7	119.2
C2	C3	O3	HO3	179.9	181.2
C4	C3	C2	H31	238.6	239.6
C2	C3	C4	S4	68.9	71.9
C2	C3	C4	H41	194.1	311.8
C2	C3	C4	H42	303.6	191.9
H21	C2	C1	H11	180.5	71.6
H21	C2	C1	H12	71.0	191.4
C1	C2	H21	O2	242.4	240.7
C1	C2	H21	C3	123.9	121.4
O2	C2	H21	C3	241.5	240.6
H21	C2	O2	HO2	63.7	300.0
H21	C2	C3	O3	293.4	285.3
H21	C2	C3	C4	50.2	45.7
H21	C2	C3	H31	171.7	166.1
HO2	O2	C2	C3	308.5	180.6
HO2	O2	C2	H21	63.7	300.0
O3	C3	C2	H21	293.4	285.3
C2	C3	O3	C4	119.7	121.4
C2	C3	O3	H31	241.1	240.6
C4	C3	O3	H31	121.4	119.3
O3	C3	C4	S4	188.3	192.2
O3	C3	C4	H41	313.6	72.1
O3	C3	C4	H42	63.1	312.2
S1	S4	C4	C3	292.5	297.8
C4	C3	C2	H21	50.2	45.7
C2	C3	C4	O3	240.5	239.7
C2	C3	C4	H31	118.9	120.5
O3	C3	C4	H31	238.4	240.8
C4	C3	O3	HO3	60.2	59.9
S4	C4	C3	H41	234.7	120.0
S4	C4	C3	H42	125.2	239.9
H41	C4	C3	H42	250.5	119.9
H31	C3	C2	H21	171.7	166.1
C2	C3	H31	O3	120.8	119.3
C2	C3	H31	C4	239.0	238.6
O3	C3	H31	C4	118.2	119.3
H31	C3	O3	HO3	298.9	300.6
H31	C3	C4	S4	310.0	311.4
H31	C3	C4	H41	75.2	191.4
H31	C3	C4	H42	184.7	71.5
HO3	O3	C3	C4	60.2	59.9
HO3	O3	C3	H31	298.9	300.6
S4	C4	C3	H31	310.0	311.4
C3	C4	S4	H41	125.3	239.9
C3	C4	S4	H42	234.8	120.1
H41	C4	S4	H42	109.5	240.2
H41	C4	C3	H31	75.2	191.4
C3	C4	H41	S4	238.3	120.2
C3	C4	H41	H42	119.1	240.1
S4	C4	H41	H42	240.8	119.8
H42	C4	C3	H31	184.7	71.5
C3	C4	H42	S4	121.7	239.7
C3	C4	H42	H41	240.9	119.9
S4	C4	H42	H41	119.2	240.2