PDB Chemical Component DT4

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for DT4

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
O2 S1 1.383 1.421
S1 O3 1.375 1.421
S1 N6 1.546 1.656
S1 C16 1.769 1.762
N6 H6N1 1.020 0.970
N6 H6N2 1.020 0.970
C16 C15 1.391 1.382
C16 C17 1.401 1.383
C15 C14 1.380 1.381
C15 H15 1.103 1.080
C14 C13 1.398 1.390
C14 H14 1.103 1.081
C13 C18 1.404 1.389
C13 N5 1.364 1.398
C18 C17 1.392 1.381
C18 H18 1.103 1.080
C17 H17 1.103 1.080
N5 C9 1.347 1.380
N5 H5 1.020 0.970
C9 N2 1.331 1.368
C9 C8 1.388 1.366
N2 N3 1.315 1.401
N2 C10 1.317 1.366
N3 C11 1.365 1.310
C11 N4 1.356 1.328
C11 H11 1.102 1.080
C10 N4 1.337 1.329
C10 N1 1.351 1.338
N1 C7 1.362 1.324
C7 C8 1.383 1.402
C7 N7 1.347 1.384
C8 H8 1.103 1.080
N7 C1 1.447 1.465
N7 H7 1.020 0.970
C1 C2 1.527 1.530
C1 C6 1.528 1.530
C1 H1 1.115 1.090
C2 C3 1.524 1.529
C2 H2C1 1.115 1.090
C2 H2C2 1.115 1.090
C3 C4 1.523 1.531
C3 H3C1 1.115 1.090
C3 H3C2 1.115 1.090
C4 N8 1.472 1.469
C4 C5 1.527 1.530
C4 H4 1.115 1.089
N8 H8N1 1.020 1.009
N8 H8N2 1.020 1.008
C5 C6 1.527 1.529
C5 H5C1 1.115 1.090
C5 H5C2 1.115 1.090
C6 H6C1 1.115 1.090
C6 H6C2 1.115 1.091

Bond Angles for DT4

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O2 S1 O3 111.4 125.4
O2 S1 N6 111.3 105.8
O2 S1 C16 107.1 105.7
O3 S1 N6 111.7 105.8
O3 S1 C16 107.2 105.8
N6 S1 C16 107.9 107.4
S1 N6 H6N1 111.3 120.0
S1 N6 H6N2 111.7 120.0
S1 C16 C15 119.7 119.9
S1 C16 C17 120.1 119.9
H6N1 N6 H6N2 111.4 120.0
C15 C16 C17 120.2 120.2
C16 C15 C14 120.3 120.1
C16 C15 H15 119.8 120.0
C16 C17 C18 119.7 120.0
C16 C17 H17 120.1 120.0
C14 C15 H15 119.8 119.9
C15 C14 C13 120.1 119.9
C15 C14 H14 120.0 120.0
C13 C14 H14 119.9 120.0
C14 C13 C18 119.9 119.8
C14 C13 N5 119.5 120.0
C18 C13 N5 120.5 120.1
C13 C18 C17 119.7 119.9
C13 C18 H18 120.1 120.0
C13 N5 C9 121.2 120.0
C13 N5 H5 119.4 120.0
C17 C18 H18 120.1 120.1
C18 C17 H17 120.1 119.9
C9 N5 H5 119.4 120.0
N5 C9 N2 120.1 120.5
N5 C9 C8 120.6 120.6
N2 C9 C8 119.2 119.0
C9 N2 N3 129.1 133.3
C9 N2 C10 121.5 120.3
C9 C8 C7 119.0 119.1
C9 C8 H8 120.5 120.4
N3 N2 C10 109.5 106.4
N2 N3 C11 107.2 107.1
N2 C10 N4 109.2 107.2
N2 C10 N1 121.7 120.4
N3 C11 N4 107.5 109.6
N3 C11 H11 126.3 125.2
N4 C11 H11 126.2 125.2
C11 N4 C10 106.6 109.7
N4 C10 N1 129.1 132.4
C10 N1 C7 119.3 120.9
N1 C7 C8 119.2 120.3
N1 C7 N7 120.4 119.8
C8 C7 N7 119.9 119.9
C7 C8 H8 120.5 120.5
C7 N7 C1 122.1 120.0
C7 N7 H7 118.9 120.0
C1 N7 H7 118.9 120.0
N7 C1 C2 104.7 109.5
N7 C1 C6 105.1 109.5
N7 C1 H1 112.3 109.5
C2 C1 C6 109.6 109.4
C2 C1 H1 112.3 109.5
C1 C2 C3 109.5 109.5
C1 C2 H2C1 112.2 109.5
C1 C2 H2C2 112.2 109.4
C6 C1 H1 112.3 109.5
C1 C6 C5 109.5 109.5
C1 C6 H6C1 112.2 109.5
C1 C6 H6C2 112.2 109.4
C3 C2 H2C1 112.2 109.5
C3 C2 H2C2 112.2 109.5
C2 C3 C4 109.4 109.5
C2 C3 H3C1 112.2 109.5
C2 C3 H3C2 112.2 109.5
H2C1 C2 H2C2 98.2 109.4
C4 C3 H3C1 112.2 109.4
C4 C3 H3C2 112.2 109.5
C3 C4 N8 109.5 109.4
C3 C4 C5 109.5 109.4
C3 C4 H4 109.4 109.5
H3C1 C3 H3C2 98.2 109.5
N8 C4 C5 109.6 109.5
N8 C4 H4 109.4 109.5
C4 N8 H8N1 114.9 106.7
C4 N8 H8N2 114.8 106.7
C5 C4 H4 109.4 109.5
C4 C5 C6 109.5 109.5
C4 C5 H5C1 112.2 109.5
C4 C5 H5C2 112.2 109.4
H8N1 N8 H8N2 95.7 106.7
C6 C5 H5C1 112.2 109.5
C6 C5 H5C2 112.2 109.5
C5 C6 H6C1 112.2 109.5
C5 C6 H6C2 112.2 109.4
H5C1 C5 H5C2 98.3 109.4
H6C1 C6 H6C2 98.2 109.5

Torsion Angles for DT4

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O3 S1 O2 N6 125.3 236.8
O3 S1 O2 C16 243.0 123.1
N6 S1 O2 C16 117.7 246.3
O2 S1 N6 H6N1 180.0 262.6
O2 S1 N6 H6N2 305.2 82.6
O2 S1 C16 C15 8.1 337.4
O2 S1 C16 C17 189.8 157.4
O2 S1 O3 N6 234.9 123.2
O2 S1 O3 C16 116.9 236.9
N6 S1 O3 C16 242.0 113.7
O3 S1 N6 H6N1 54.9 37.4
O3 S1 N6 H6N2 180.0 217.4
O3 S1 C16 C15 127.8 202.6
O3 S1 C16 C17 309.4 22.6
O2 S1 N6 O3 125.1 225.2
O2 S1 N6 C16 242.8 112.6
O3 S1 N6 C16 117.6 247.4
N6 S1 C16 C15 248.2 90.0
N6 S1 C16 C17 69.9 270.0
H6N1 N6 S1 H6N2 234.8 180.0
O2 S1 C16 O3 240.3 134.8
O2 S1 C16 N6 119.9 247.4
O3 S1 C16 N6 239.6 112.6
C16 S1 N6 H6N1 297.3 150.0
C16 S1 N6 H6N2 62.4 330.0
C15 C16 S1 C17 178.3 180.0
S1 C16 C15 C14 180.9 180.0
S1 C16 C15 H15 0.9 0.1
S1 C16 C17 C18 178.6 179.8
S1 C16 C17 H17 358.6 0.0
H6N1 N6 S1 C16 297.3 150.0
S1 N6 H6N1 H6N2 125.3 180.0
H6N2 N6 S1 C16 62.4 330.0
S1 N6 H6N2 H6N1 234.9 180.0
S1 C16 C15 C17 181.7 180.0
C15 C16 C17 C18 0.3 359.8
C15 C16 C17 H17 180.2 180.1
C14 C15 C16 H15 180.0 179.9
C16 C15 C14 C13 0.1 0.1
C16 C15 C14 H14 180.1 180.1
S1 C16 C17 C15 178.3 180.0
C17 C16 C15 C14 359.2 359.9
C17 C16 C15 H15 179.2 180.0
C13 C18 C17 C16 0.9 0.5
C16 C17 C18 H18 181.0 180.0
C18 C17 C16 H17 180.0 179.7
C14 C15 C16 C17 359.2 359.9
C16 C15 C14 H15 180.0 180.1
C13 C14 C15 H14 180.0 180.0
C15 C14 C13 C18 1.2 0.2
C15 C14 C13 N5 178.0 180.0
H15 C15 C16 C17 179.2 180.0
C16 C15 H15 C14 180.0 179.9
H15 C15 C14 C13 180.1 180.0
H15 C15 C14 H14 0.1 360.0
C13 C14 C15 H15 180.1 180.0
C15 C14 C13 H14 180.0 180.0
C18 C13 C14 N5 183.1 180.2
C14 C13 C18 C17 358.3 359.5
C14 C13 C18 H18 178.3 180.0
C14 C13 N5 C9 144.7 172.7
C14 C13 N5 H5 324.7 352.7
H14 C14 C15 H15 0.1 360.0
C15 C14 H14 C13 180.0 180.0
H14 C14 C13 C18 181.1 180.2
H14 C14 C13 N5 358.0 360.0
C16 C17 C18 C13 0.9 0.5
C18 C13 C14 H14 181.1 180.2
C14 C13 C18 N5 176.8 179.8
C18 C13 N5 C9 321.5 352.5
C18 C13 N5 H5 141.5 172.5
C17 C18 C13 H18 180.0 179.5
C13 C18 C17 H17 181.0 180.2
N5 C13 C14 H14 358.0 360.0
C14 C13 N5 C18 183.2 180.2
N5 C13 C18 C17 181.5 179.7
N5 C13 C18 H18 1.5 0.2
C9 N5 C13 H5 180.0 180.1
C13 N5 C9 N2 155.8 301.9
C13 N5 C9 C8 335.0 121.9
C16 C17 C18 H17 180.0 180.3
C17 C18 C13 N5 181.5 179.7
C13 C18 C17 H18 180.0 180.5
H18 C18 C13 N5 1.5 0.2
C13 C18 H18 C17 180.0 179.5
H18 C18 C17 H17 1.0 359.8
C16 C17 H17 C18 180.0 179.7
H17 C17 C18 H18 1.0 359.8
C13 N5 C9 H5 180.0 179.9
N2 C9 N5 C8 180.8 180.1
N5 C9 N2 N3 359.7 0.0
N5 C9 N2 C10 179.6 179.9
N5 C9 C8 C7 178.8 180.0
N5 C9 C8 H8 358.8 0.1
C13 N5 H5 C9 180.0 180.1
H5 N5 C9 N2 335.8 122.0
H5 N5 C9 C8 154.9 301.9
N2 C9 N5 H5 335.8 122.0
N5 C9 N2 C8 179.2 179.9
N2 C9 C8 C7 357.9 360.0
N2 C9 C8 H8 178.0 180.0
N3 N2 C9 C10 180.0 180.1
C9 N2 N3 C11 180.4 180.0
C9 N2 C10 N4 179.7 180.0
C9 N2 C10 N1 0.1 359.8
C8 C9 N5 H5 154.9 301.9
N5 C9 C8 N2 180.8 180.1
C8 C9 N2 N3 180.5 180.1
C8 C9 N2 C10 0.5 360.0
N1 C7 C8 C9 3.1 0.2
C9 C8 C7 N7 175.7 180.0
C7 C8 C9 H8 180.0 180.0
N3 N2 C9 C8 180.5 180.1
C9 N2 N3 C10 180.0 179.9
N3 N2 C10 N4 359.7 359.9
N3 N2 C10 N1 180.1 179.8
N2 N3 C11 N4 359.7 0.0
N2 N3 C11 H11 179.7 179.9
C10 N2 C9 C8 0.5 360.0
C9 N2 C10 N3 180.0 180.1
C10 N2 N3 C11 0.4 0.0
C11 N4 C10 N2 0.1 0.1
N4 C10 N2 N1 179.6 180.2
N2 C10 N1 C7 1.0 0.4
C11 N3 N2 C10 0.4 0.0
N4 C11 N3 H11 180.0 180.1
N3 C11 N4 C10 0.1 360.0
N2 C10 N4 C11 0.1 0.1
N3 C11 N4 H11 180.0 179.9
C11 N4 C10 N1 179.6 180.3
N3 C11 H11 N4 180.0 180.1
H11 C11 N4 C10 180.1 180.1
N2 C10 N4 N1 180.5 179.8
C10 N4 C11 H11 180.1 180.1
N4 C10 N1 C7 181.5 180.2
N2 C10 N1 N4 179.5 180.2
C10 N1 C7 C8 357.4 359.6
C10 N1 C7 N7 184.9 179.8
C9 C8 C7 N1 3.1 0.2
C8 C7 N1 N7 172.5 179.7
N1 C7 C8 H8 183.1 180.2
N1 C7 N7 C1 280.0 359.7
N1 C7 N7 H7 100.0 179.7
C9 C8 C7 H8 180.0 180.0
N1 C7 C8 N7 187.4 180.3
C8 C7 N7 C1 107.5 180.0
C8 C7 N7 H7 287.6 360.0
N1 C7 N7 C8 172.5 179.7
N7 C7 C8 H8 355.7 360.0
C1 N7 C7 H7 180.0 180.0
C7 N7 C1 C2 182.4 155.0
C7 N7 C1 C6 67.0 275.0
C7 N7 C1 H1 304.5 35.0
C9 C8 H8 C7 180.0 180.0
H8 C8 C7 N7 355.7 360.0
C7 N7 C1 H7 180.0 180.0
C2 C1 N7 C6 115.4 240.1
C2 C1 N7 H1 237.9 120.0
N7 C1 C2 C3 187.9 180.0
N7 C1 C2 H2C1 62.6 59.9
N7 C1 C2 H2C2 313.2 300.0
C6 C1 N7 H1 122.4 240.0
N7 C1 C6 C5 171.5 180.0
N7 C1 C6 H6C1 46.2 300.1
N7 C1 C6 H6C2 296.8 60.0
C7 N7 H7 C1 180.0 180.0
H7 N7 C1 C2 2.4 335.0
H7 N7 C1 C6 247.0 95.0
H7 N7 C1 H1 124.5 215.0
C2 C1 N7 H7 2.4 335.0
N7 C1 C2 C6 247.7 120.0
N7 C1 C2 H1 122.1 239.9
C6 C1 C2 H1 234.4 120.0
C2 C1 C6 C5 59.5 300.0
C2 C1 C6 H6C1 294.2 60.0
C2 C1 C6 H6C2 184.8 180.0
C3 C2 C1 H2C1 125.3 120.1
C3 C2 C1 H2C2 234.7 240.0
C1 C2 C3 C4 60.2 300.0
C1 C2 C3 H3C1 295.0 180.0
C1 C2 C3 H3C2 185.5 60.0
H2C1 C2 C1 H2C2 109.5 119.9
C6 C1 N7 H7 247.0 95.0
N7 C1 C6 C2 112.0 240.0
N7 C1 C6 H1 237.6 120.1
C2 C1 C6 H1 125.6 240.0
C6 C1 C2 C3 300.2 60.0
C6 C1 C2 H2C1 174.9 300.0
C6 C1 C2 H2C2 65.4 180.1
C4 C5 C6 C1 300.4 60.1
C1 C6 C5 H5C1 175.1 300.1
C1 C6 C5 H5C2 65.6 180.0
C5 C6 C1 H6C1 125.3 239.9
C5 C6 C1 H6C2 234.7 119.9
H6C1 C6 C1 H6C2 109.4 240.0
H1 C1 N7 H7 124.5 215.0
N7 C1 H1 C2 242.3 120.0
N7 C1 H1 C6 118.3 240.0
C2 C1 H1 C6 235.9 119.9
H1 C1 C2 C3 65.8 300.1
H1 C1 C2 H2C1 300.5 180.0
H1 C1 C2 H2C2 191.1 60.1
H1 C1 C6 C5 293.9 59.9
H1 C1 C6 H6C1 168.6 180.0
H1 C1 C6 H6C2 59.2 300.0
C3 C2 C1 C6 300.2 60.0
C3 C2 C1 H1 65.8 300.1
C1 C2 C3 H2C1 234.7 240.0
C1 C2 C3 H2C2 125.3 120.0
H2C1 C2 C3 H2C2 250.5 240.0
C4 C3 C2 H3C1 125.2 120.0
C4 C3 C2 H3C2 234.8 240.0
C2 C3 C4 N8 179.4 180.0
C2 C3 C4 C5 299.6 60.0
C2 C3 C4 H4 59.5 300.0
H3C1 C3 C2 H3C2 109.5 120.0
H2C1 C2 C1 C6 174.9 300.0
H2C1 C2 C1 H1 300.5 180.0
C1 C2 H2C1 C3 123.7 120.0
C1 C2 H2C1 H2C2 241.9 240.1
C3 C2 H2C1 H2C2 118.1 120.0
H2C1 C2 C3 C4 185.5 60.0
H2C1 C2 C3 H3C1 60.3 300.0
H2C1 C2 C3 H3C2 310.7 180.0
H2C2 C2 C1 C6 65.4 180.1
H2C2 C2 C1 H1 191.1 60.1
C1 C2 H2C2 C3 236.3 240.0
C1 C2 H2C2 H2C1 118.1 119.9
C3 C2 H2C2 H2C1 241.9 240.0
H2C2 C2 C3 C4 295.0 180.0
H2C2 C2 C3 H3C1 169.7 60.0
H2C2 C2 C3 H3C2 60.2 300.0
C4 C3 C2 H2C1 185.5 60.0
C4 C3 C2 H2C2 295.0 180.0
C2 C3 C4 H3C1 234.7 240.0
C2 C3 C4 H3C2 125.2 120.0
H3C1 C3 C4 H3C2 250.5 240.0
N8 C4 C3 C5 239.8 120.0
N8 C4 C3 H4 119.9 240.0
C3 C4 N8 H8N1 270.1 180.0
C3 C4 N8 H8N2 160.6 293.7
C5 C4 C3 H4 240.1 120.0
C3 C4 C5 C6 60.1 300.0
C3 C4 C5 H5C1 185.4 60.0
C3 C4 C5 H5C2 294.9 180.0
H3C1 C3 C2 H2C1 60.3 300.0
H3C1 C3 C2 H2C2 169.7 60.0
C2 C3 H3C1 C4 123.7 120.0
C2 C3 H3C1 H3C2 241.9 239.9
C4 C3 H3C1 H3C2 118.1 120.0
H3C1 C3 C4 N8 304.7 300.0
H3C1 C3 C4 C5 64.9 180.0
H3C1 C3 C4 H4 184.7 60.0
H3C2 C3 C2 H2C1 310.7 180.0
H3C2 C3 C2 H2C2 60.2 300.0
C2 C3 H3C2 C4 236.3 240.0
C2 C3 H3C2 H3C1 118.2 120.0
C4 C3 H3C2 H3C1 241.9 240.0
H3C2 C3 C4 N8 54.2 60.0
H3C2 C3 C4 C5 174.4 300.0
H3C2 C3 C4 H4 294.2 180.0
N8 C4 C3 H3C1 304.7 300.0
N8 C4 C3 H3C2 54.2 60.0
C3 C4 N8 C5 120.1 240.0
C3 C4 N8 H4 240.1 120.0
C5 C4 N8 H4 120.0 239.9
N8 C4 C5 C6 180.3 180.0
N8 C4 C5 H5C1 305.5 300.1
N8 C4 C5 H5C2 55.0 60.0
H8N1 N8 C4 H8N2 109.5 246.3
C1 C6 C5 C4 300.4 60.1
C5 C4 C3 H3C1 64.9 180.0
C5 C4 C3 H3C2 174.4 300.0
C3 C4 C5 N8 239.8 119.9
C3 C4 C5 H4 119.9 240.0
N8 C4 C5 H4 240.0 120.1
C5 C4 N8 H8N1 150.0 300.0
C5 C4 N8 H8N2 40.5 53.7
C6 C5 C4 H5C1 234.8 240.0
C6 C5 C4 H5C2 125.2 120.0
C4 C5 C6 H6C1 65.6 300.0
C4 C5 C6 H6C2 175.1 180.0
H5C1 C5 C4 H5C2 250.5 240.1
H4 C4 C3 H3C1 184.7 60.0
H4 C4 C3 H3C2 294.2 180.0
C3 C4 H4 N8 120.0 240.0
C3 C4 H4 C5 240.1 120.0
N8 C4 H4 C5 120.1 239.9
H4 C4 N8 H8N1 30.0 60.0
H4 C4 N8 H8N2 280.5 173.8
H4 C4 C5 C6 300.3 60.0
H4 C4 C5 H5C1 65.5 180.0
H4 C4 C5 H5C2 175.0 299.9
H8N1 N8 C4 C5 150.0 300.0
H8N1 N8 C4 H4 30.0 60.0
C4 N8 H8N1 H8N2 239.3 113.8
H8N2 N8 C4 C5 40.5 53.7
H8N2 N8 C4 H4 280.5 173.8
C4 N8 H8N2 H8N1 120.7 246.3
C5 C6 C1 H1 293.9 59.9
C1 C6 C5 H6C1 234.7 120.1
C1 C6 C5 H6C2 125.3 240.1
C6 C5 C4 H4 300.3 60.0
C4 C5 C6 H5C1 125.3 120.0
C4 C5 C6 H5C2 234.8 240.0
H5C1 C5 C6 H5C2 109.5 120.0
H6C1 C6 C5 H6C2 250.6 120.0
H5C1 C5 C4 H4 65.5 180.0
C4 C5 H5C1 C6 236.2 240.0
C4 C5 H5C1 H5C2 118.1 119.9
C6 C5 H5C1 H5C2 241.9 239.9
H5C1 C5 C6 H6C1 300.4 180.0
H5C1 C5 C6 H6C2 49.8 60.0
H5C2 C5 C4 H4 175.0 299.9
C4 C5 H5C2 C6 123.8 120.0
C4 C5 H5C2 H5C1 241.9 240.1
C6 C5 H5C2 H5C1 118.1 120.1
H5C2 C5 C6 H6C1 190.9 60.0
H5C2 C5 C6 H6C2 300.3 300.0
H6C1 C6 C1 H1 168.6 180.0
C1 C6 H6C1 C5 123.8 239.9
C1 C6 H6C1 H6C2 241.9 120.0
H6C1 C6 C5 H5C1 300.4 180.0
H6C1 C6 C5 H5C2 190.9 60.0
C5 C6 H6C1 H6C2 118.1 240.0
H6C2 C6 C1 H1 59.2 300.0
C1 C6 H6C2 C5 236.2 120.0
C1 C6 H6C2 H6C1 118.1 240.0
H6C2 C6 C5 H5C1 49.8 60.0
H6C2 C6 C5 H5C2 300.3 300.0
C5 C6 H6C2 H6C1 241.9 120.0