PDB Chemical Component DSM

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for DSM

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C18 N2 1.528 1.468
C18 H181 1.100 1.090
C18 H182 1.100 1.091
C18 H183 1.100 1.090
N2 C17 1.531 1.469
N2 HN2 1.000 1.009
C17 C16 1.587 1.530
C17 H171 1.100 1.090
C17 H172 1.100 1.090
C16 C15 1.525 1.529
C16 H161 1.100 1.091
C16 H162 1.100 1.090
C15 N1 1.508 1.465
C15 H151 1.100 1.091
C15 H152 1.100 1.090
N1 C11 1.434 1.392
N1 C14 1.471 1.390
C14 C1 1.431 1.401
C14 C13 1.458 1.376
C1 C2 1.422 1.375
C1 H1 1.080 1.080
C2 C3 1.397 1.383
C2 H2 1.080 1.080
C3 C4 1.505 1.376
C3 H3 1.080 1.080
C4 C13 1.385 1.398
C4 H4 1.080 1.080
C13 C5 1.501 1.508
C5 C6 1.520 1.509
C5 H51 1.100 1.090
C5 H52 1.100 1.090
C6 C12 1.525 1.499
C6 H61 1.100 1.090
C6 H62 1.100 1.090
C12 C11 1.410 1.374
C12 C7 1.388 1.386
C11 C10 1.406 1.388
C7 C8 1.531 1.383
C7 H7 1.080 1.080
C8 C9 1.403 1.383
C8 H8 1.080 1.080
C9 C10 1.412 1.387
C9 H9 1.080 1.080
C10 H10 1.080 1.081

Bond Angles for DSM

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
N2 C18 H181 109.5 109.5
N2 C18 H182 109.5 109.4
N2 C18 H183 109.5 109.5
C18 N2 C17 133.6 111.0
C18 N2 HN2 102.1 111.0
H181 C18 H182 109.5 109.4
H181 C18 H183 109.4 109.5
H182 C18 H183 109.5 109.4
C17 N2 HN2 102.1 111.0
N2 C17 C16 106.6 109.5
N2 C17 H171 110.4 109.5
N2 C17 H172 111.1 109.4
C16 C17 H171 110.4 109.5
C16 C17 H172 111.1 109.5
C17 C16 C15 125.9 109.5
C17 C16 H161 104.3 109.4
C17 C16 H162 100.4 109.4
H171 C17 H172 107.3 109.4
C15 C16 H161 104.3 109.5
C15 C16 H162 100.5 109.5
C16 C15 N1 119.9 109.5
C16 C15 H151 106.1 109.5
C16 C15 H152 103.7 109.5
H161 C16 H162 123.5 109.5
N1 C15 H151 106.1 109.4
N1 C15 H152 103.7 109.5
C15 N1 C11 125.3 118.3
C15 N1 C14 123.9 118.4
H151 C15 H152 118.1 109.5
C14 N1 C11 110.8 123.3
N1 C11 C12 125.2 117.2
N1 C11 C10 119.5 121.5
N1 C14 C1 118.7 115.8
N1 C14 C13 126.3 124.3
C1 C14 C13 115.0 119.9
C14 C1 C2 123.4 120.9
C14 C1 H1 118.3 119.5
C14 C13 C4 121.7 118.5
C14 C13 C5 128.4 127.1
C2 C1 H1 118.3 119.5
C1 C2 C3 122.6 119.3
C1 C2 H2 118.7 120.4
C3 C2 H2 118.7 120.3
C2 C3 C4 114.5 119.9
C2 C3 H3 122.8 120.1
C4 C3 H3 122.8 120.0
C3 C4 C13 122.7 121.5
C3 C4 H4 118.7 119.3
C13 C4 H4 118.6 119.3
C4 C13 C5 109.8 114.4
C13 C5 C6 116.8 114.5
C13 C5 H51 107.1 108.5
C13 C5 H52 105.4 108.5
C6 C5 H51 107.1 108.5
C6 C5 H52 105.4 108.5
C5 C6 C12 112.9 112.2
C5 C6 H61 108.3 108.9
C5 C6 H62 107.5 108.9
H51 C5 H52 115.4 108.3
C12 C6 H61 108.3 108.9
C12 C6 H62 107.6 108.9
C6 C12 C11 118.2 120.3
C6 C12 C7 120.5 120.0
H61 C6 H62 112.2 108.9
C11 C12 C7 121.3 119.7
C12 C11 C10 115.3 121.4
C12 C7 C8 121.8 119.6
C12 C7 H7 119.1 120.2
C11 C10 C9 128.0 118.7
C11 C10 H10 116.0 120.4
C8 C7 H7 119.1 120.2
C7 C8 C9 116.1 120.5
C7 C8 H8 122.0 119.7
C9 C8 H8 121.9 119.8
C8 C9 C10 117.5 120.2
C8 C9 H9 121.3 120.0
C10 C9 H9 121.2 119.8
C9 C10 H10 116.0 120.9

Torsion Angles for DSM

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
H181 C18 N2 H182 240.0 240.0
H181 C18 N2 H183 120.0 120.1
H182 C18 N2 H183 240.0 240.0
C17 N2 C18 HN2 240.0 236.0
C18 N2 C17 C16 107.3 180.0
C18 N2 C17 H171 227.3 300.1
C18 N2 C17 H172 346.2 60.0
N2 C18 H181 H182 120.0 120.0
N2 C18 H181 H183 240.0 239.9
H181 C18 N2 C17 192.5 180.0
H181 C18 N2 HN2 312.5 304.0
H182 C18 H181 H183 120.0 120.0
N2 C18 H182 H181 240.0 240.0
N2 C18 H182 H183 120.0 120.0
H182 C18 N2 C17 312.5 299.9
H182 C18 N2 HN2 72.5 64.0
H181 C18 H182 H183 240.0 240.0
N2 C18 H183 H181 120.0 120.1
N2 C18 H183 H182 240.0 240.0
H183 C18 N2 C17 72.5 59.9
H183 C18 N2 HN2 192.5 183.9
H181 C18 H183 H182 120.0 120.0
C17 N2 C18 H181 192.5 180.0
C17 N2 C18 H182 312.5 299.9
C17 N2 C18 H183 72.5 59.9
C18 N2 C17 HN2 120.0 124.0
C16 C17 N2 H171 240.0 240.0
C16 C17 N2 H172 121.1 120.0
N2 C17 C16 C15 179.6 180.1
N2 C17 C16 H161 299.5 300.1
N2 C17 C16 H162 68.4 60.0
H171 C17 N2 H172 241.1 240.0
HN2 N2 C18 H181 312.5 304.0
HN2 N2 C18 H182 72.5 64.0
HN2 N2 C18 H183 192.5 183.9
C18 N2 HN2 C17 219.9 236.0
HN2 N2 C17 C16 347.3 56.0
HN2 N2 C17 H171 107.3 176.0
HN2 N2 C17 H172 226.2 296.0
C16 C17 N2 HN2 347.3 56.0
N2 C17 C16 H171 120.0 120.1
N2 C17 C16 H172 238.9 240.0
H171 C17 C16 H172 118.9 119.9
C15 C16 C17 H161 240.0 240.0
C15 C16 C17 H162 111.2 120.1
C17 C16 C15 N1 81.4 175.5
C17 C16 C15 H151 201.4 295.4
C17 C16 C15 H152 326.5 55.4
H161 C16 C17 H162 231.2 240.1
H171 C17 N2 HN2 107.3 176.0
N2 C17 H171 C16 242.4 239.9
N2 C17 H171 H172 121.2 120.0
C16 C17 H171 H172 238.8 240.0
H171 C17 C16 C15 59.6 60.0
H171 C17 C16 H161 179.6 180.0
H171 C17 C16 H162 308.4 299.9
H172 C17 N2 HN2 226.2 296.0
N2 C17 H172 C16 118.4 120.0
N2 C17 H172 H171 239.2 240.0
C16 C17 H172 H171 120.8 120.0
H172 C17 C16 C15 300.7 300.0
H172 C17 C16 H161 60.7 60.0
H172 C17 C16 H162 189.5 180.0
C15 C16 C17 H171 59.6 60.0
C15 C16 C17 H172 300.7 300.0
C17 C16 C15 H161 120.0 120.0
C17 C16 C15 H162 248.8 240.0
H161 C16 C15 H162 128.8 120.0
N1 C15 C16 H151 240.0 240.1
N1 C15 C16 H152 114.9 120.1
C16 C15 N1 C11 0.3 275.3
C16 C15 N1 C14 179.5 95.4
H151 C15 C16 H152 234.9 240.0
H161 C16 C17 H171 179.6 180.0
H161 C16 C17 H172 60.7 60.0
C17 C16 H161 C15 226.4 240.0
C17 C16 H161 H162 113.2 119.9
C15 C16 H161 H162 246.8 239.9
H161 C16 C15 N1 321.4 55.5
H161 C16 C15 H151 81.4 175.4
H161 C16 C15 H152 206.5 295.4
H162 C16 C17 H171 308.4 299.9
H162 C16 C17 H172 189.5 180.0
C17 C16 H162 C15 129.8 120.0
C17 C16 H162 H161 244.9 240.1
C15 C16 H162 H161 115.1 120.0
H162 C16 C15 N1 192.6 295.5
H162 C16 C15 H151 312.6 55.4
H162 C16 C15 H152 77.6 175.4
N1 C15 C16 H161 321.4 55.5
N1 C15 C16 H162 192.6 295.5
C16 C15 N1 H151 120.0 120.0
C16 C15 N1 H152 245.1 239.9
H151 C15 N1 H152 125.1 120.0
C14 N1 C15 C11 179.2 180.2
C15 N1 C11 C12 243.8 114.8
C15 N1 C11 C10 63.7 295.1
C15 N1 C14 C1 309.5 44.9
C15 N1 C14 C13 132.7 224.6
H151 C15 C16 H161 81.4 175.4
H151 C15 C16 H162 312.6 55.4
C16 C15 H151 N1 231.4 240.0
C16 C15 H151 H152 115.7 120.0
N1 C15 H151 H152 244.3 240.0
H151 C15 N1 C11 240.3 155.3
H151 C15 N1 C14 59.5 335.5
H152 C15 C16 H161 206.5 295.4
H152 C15 C16 H162 77.6 175.4
C16 C15 H152 N1 126.0 120.0
C16 C15 H152 H151 243.0 240.0
N1 C15 H152 H151 117.0 120.0
H152 C15 N1 C11 115.2 35.3
H152 C15 N1 C14 294.4 215.5
C11 N1 C15 H151 240.3 155.3
C11 N1 C15 H152 115.2 35.3
C15 N1 C11 C14 179.3 180.2
C11 N1 C14 C1 128.8 225.1
C11 N1 C14 C13 312.0 44.8
C6 C12 C11 N1 0.2 2.2
N1 C11 C12 C7 180.1 181.9
C12 C11 N1 C10 180.1 179.6
N1 C11 C10 C9 179.9 178.3
N1 C11 C10 H10 359.9 358.7
C14 N1 C15 H151 59.5 335.5
C14 N1 C15 H152 294.4 215.5
C15 N1 C14 C11 180.7 179.8
C14 N1 C11 C12 64.5 294.6
C14 N1 C11 C10 244.4 114.9
C1 C14 N1 C13 176.8 180.3
N1 C14 C1 C2 180.4 178.6
N1 C14 C1 H1 0.4 358.6
N1 C14 C13 C4 179.6 182.1
N1 C14 C13 C5 356.0 3.8
C1 C14 N1 C11 128.8 225.1
N1 C14 C1 C13 182.8 179.7
C1 C14 C13 C4 2.7 1.8
C1 C14 C13 C5 179.1 183.5
C2 C1 C14 H1 180.0 180.0
C14 C1 C2 C3 2.1 359.9
C14 C1 C2 H2 182.1 179.9
C13 C14 N1 C11 312.0 44.8
N1 C14 C13 C1 176.9 180.3
C13 C14 C1 C2 357.6 358.9
C13 C14 C1 H1 177.6 178.9
C3 C4 C13 C14 357.4 358.7
C14 C13 C4 H4 177.4 178.7
C4 C13 C14 C5 183.6 178.3
C14 C13 C5 C6 1.2 12.2
C14 C13 C5 H51 121.2 133.5
C14 C13 C5 H52 244.6 250.9
C2 C1 C14 C13 357.6 358.9
C14 C1 C2 H1 180.0 180.0
C3 C2 C1 H2 180.0 180.0
C1 C2 C3 C4 358.3 0.6
C1 C2 C3 H3 178.3 180.6
H1 C1 C14 C13 177.6 178.9
C14 C1 H1 C2 180.0 180.0
H1 C1 C2 C3 182.1 179.8
H1 C1 C2 H2 2.0 359.8
C3 C2 C1 H1 182.1 179.8
C1 C2 C3 H2 180.0 180.0
C4 C3 C2 H3 180.0 180.0
C2 C3 C4 C13 2.0 0.1
C2 C3 C4 H4 182.0 180.1
H2 C2 C1 H1 2.0 359.8
C1 C2 H2 C3 180.0 180.0
H2 C2 C3 C4 178.4 180.6
H2 C2 C3 H3 358.3 0.7
C14 C13 C4 C3 357.4 358.7
C4 C3 C2 H2 178.4 180.6
C2 C3 C4 H3 180.0 180.0
C13 C4 C3 H4 180.0 180.1
C3 C4 C13 C5 180.4 177.2
H3 C3 C2 H2 358.3 0.7
C2 C3 H3 C4 180.0 180.0
H3 C3 C4 C13 182.0 180.1
H3 C3 C4 H4 2.0 0.0
C14 C13 C4 C5 177.0 181.5
C13 C4 C3 H3 182.0 180.1
C3 C4 C13 H4 180.0 179.9
C4 C13 C5 C6 178.0 193.8
C4 C13 C5 H51 298.0 315.1
C4 C13 C5 H52 61.4 72.5
H4 C4 C3 H3 2.0 0.0
C3 C4 H4 C13 180.0 180.1
H4 C4 C13 C5 0.3 357.2
C14 C13 C5 C4 183.2 178.4
C5 C13 C4 H4 0.3 357.2
C6 C5 C13 H51 240.0 238.7
C6 C5 C13 H52 116.6 121.3
C13 C5 C6 C12 54.5 293.9
C13 C5 C6 H61 174.4 54.5
C13 C5 C6 H62 295.9 173.1
H51 C5 C13 H52 236.6 242.6
C13 C5 C6 H51 120.0 121.3
C13 C5 C6 H52 243.4 238.7
H51 C5 C6 H52 123.4 117.4
C12 C6 C5 H61 240.0 239.3
C12 C6 C5 H62 118.5 120.7
C5 C6 C12 C11 288.7 69.9
C5 C6 C12 C7 108.8 250.2
H61 C6 C5 H62 238.5 241.4
C13 C5 H51 C6 234.0 235.1
C13 C5 H51 H52 117.0 117.5
C6 C5 H51 H52 243.0 242.4
H51 C5 C6 C12 294.4 172.6
H51 C5 C6 H61 54.4 293.2
H51 C5 C6 H62 175.9 51.9
C13 C5 H52 C6 124.1 124.9
C13 C5 H52 H51 242.0 242.5
C6 C5 H52 H51 117.9 117.5
H52 C5 C6 C12 171.0 55.2
H52 C5 C6 H61 291.0 175.8
H52 C5 C6 H62 52.5 294.4
N1 C11 C12 C6 0.2 2.2
C12 C6 C5 H51 294.4 172.6
C12 C6 C5 H52 171.0 55.2
C5 C6 C12 H61 120.0 120.7
C5 C6 C12 H62 241.5 239.3
H61 C6 C12 H62 121.5 118.6
C11 C12 C6 C7 179.9 179.6
C6 C12 C11 C10 180.4 181.9
C6 C12 C7 C8 179.6 178.9
C6 C12 C7 H7 359.6 358.8
H61 C6 C5 H51 54.4 293.2
H61 C6 C5 H52 291.0 175.8
C5 C6 H61 C12 237.2 237.3
C5 C6 H61 H62 118.6 118.6
C12 C6 H61 H62 241.4 241.3
H61 C6 C12 C11 168.7 309.2
H61 C6 C12 C7 348.8 129.6
H62 C6 C5 H51 175.9 51.9
H62 C6 C5 H52 52.5 294.4
C5 C6 H62 C12 121.9 122.7
C5 C6 H62 H61 241.0 241.4
C12 C6 H62 H61 119.0 118.7
H62 C6 C12 C11 47.2 190.6
H62 C6 C12 C7 227.3 11.0
N1 C11 C12 C10 179.9 180.4
C11 C12 C6 H61 168.7 309.2
C11 C12 C6 H62 47.2 190.6
C6 C12 C11 C7 180.1 180.4
C11 C12 C7 C8 359.8 359.2
C11 C12 C7 H7 179.8 179.2
C12 C11 C10 C9 359.8 358.7
C12 C11 C10 H10 179.8 179.0
C7 C12 C6 H61 348.8 129.6
C7 C12 C6 H62 227.3 11.0
C6 C12 C7 C11 179.9 179.6
C7 C12 C11 C10 0.2 1.5
C8 C7 C12 H7 180.0 180.0
C12 C7 C8 C9 0.2 359.8
C12 C7 C8 H8 180.2 179.9
N1 C11 C10 C12 180.1 179.6
C10 C11 C12 C7 0.2 1.5
C8 C9 C10 C11 0.2 0.3
C11 C10 C9 H9 180.2 180.1
C9 C10 C11 H10 180.0 179.7
C12 C7 C8 H7 180.0 180.0
C9 C8 C7 H8 180.0 180.0
C7 C8 C9 C10 359.9 0.4
C7 C8 C9 H9 179.8 180.6
C12 C7 H7 C8 180.0 180.0
H7 C7 C8 C9 180.2 179.9
H7 C7 C8 H8 0.2 359.9
C11 C10 C9 C8 0.2 0.3
C9 C8 C7 H7 180.2 179.9
C7 C8 C9 H8 180.0 180.0
C10 C9 C8 H9 180.0 179.8
C8 C9 C10 H10 180.2 180.0
H8 C8 C7 H7 0.2 359.9
C7 C8 H8 C9 180.0 180.0
H8 C8 C9 C10 179.9 180.3
H8 C8 C9 H9 359.9 0.5
C11 C10 C9 H10 180.0 180.3
C10 C9 C8 H8 179.9 180.3
C8 C9 C10 H9 180.0 180.2
H9 C9 C8 H8 359.9 0.5
C8 C9 H9 C10 180.0 179.8
H9 C9 C10 H10 0.2 359.8
C11 C10 H10 C9 180.0 179.7
H10 C10 C9 H9 0.2 359.8