PDB Chemical Component DSG
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for DSG
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
N |
CA |
1.491 |
1.441 |
N |
H |
1.026 |
1.005 |
N |
H2 |
1.020 |
1.006 |
CA |
C |
1.570 |
1.517 |
CA |
CB |
1.559 |
1.528 |
CA |
HA |
1.106 |
1.097 |
C |
O |
1.232 |
1.224 |
C |
OXT |
|
1.359 |
CB |
CG |
1.547 |
1.518 |
CB |
HB2 |
1.105 |
1.097 |
CB |
HB3 |
1.110 |
1.096 |
CG |
OD1 |
1.230 |
1.229 |
CG |
ND2 |
1.325 |
1.376 |
ND2 |
HD21 |
1.026 |
1.015 |
ND2 |
HD22 |
1.026 |
1.015 |
OXT |
HXT |
|
0.981 |
Bond Angles for DSG
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
CA |
N |
H |
120.6 |
119.0 |
CA |
N |
H2 |
109.2 |
119.0 |
N |
CA |
C |
117.8 |
108.2 |
N |
CA |
CB |
107.6 |
112.6 |
N |
CA |
HA |
105.6 |
105.2 |
H |
N |
H2 |
120.5 |
120.6 |
C |
CA |
CB |
114.3 |
112.5 |
C |
CA |
HA |
106.0 |
108.2 |
CA |
C |
O |
117.9 |
125.2 |
CA |
C |
OXT |
|
111.9 |
CB |
CA |
HA |
104.3 |
109.8 |
CA |
CB |
CG |
115.8 |
113.2 |
CA |
CB |
HB2 |
110.4 |
110.0 |
CA |
CB |
HB3 |
109.8 |
110.4 |
O |
C |
OXT |
|
122.9 |
C |
OXT |
HXT |
|
115.2 |
CG |
CB |
HB2 |
107.7 |
107.1 |
CG |
CB |
HB3 |
108.8 |
109.2 |
CB |
CG |
OD1 |
121.6 |
122.3 |
CB |
CG |
ND2 |
118.1 |
113.7 |
HB2 |
CB |
HB3 |
103.6 |
106.8 |
OD1 |
CG |
ND2 |
120.3 |
123.9 |
CG |
ND2 |
HD21 |
116.9 |
120.9 |
CG |
ND2 |
HD22 |
116.4 |
122.5 |
HD21 |
ND2 |
HD22 |
126.7 |
116.6 |
Torsion Angles for DSG
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
H |
N |
CA |
H2 |
214.0 |
166.6 |
C |
CA |
N |
CB |
229.1 |
235.0 |
C |
CA |
N |
HA |
118.0 |
115.5 |
N |
CA |
C |
O |
136.4 |
36.5 |
N |
CA |
C |
OXT |
|
218.3 |
CB |
CA |
N |
HA |
249.0 |
240.4 |
N |
CA |
CB |
CG |
306.9 |
176.8 |
N |
CA |
CB |
HB2 |
69.7 |
57.1 |
N |
CA |
CB |
HB3 |
183.2 |
299.5 |
CA |
N |
H |
H2 |
142.2 |
193.6 |
H |
N |
CA |
C |
268.7 |
14.1 |
H |
N |
CA |
CB |
39.7 |
139.1 |
H |
N |
CA |
HA |
150.7 |
258.6 |
CA |
N |
H2 |
H |
214.0 |
166.4 |
H2 |
N |
CA |
C |
54.7 |
207.4 |
H2 |
N |
CA |
CB |
185.7 |
332.4 |
H2 |
N |
CA |
HA |
296.7 |
92.0 |
C |
CA |
N |
H |
268.7 |
14.1 |
C |
CA |
N |
H2 |
54.7 |
207.4 |
N |
CA |
C |
CB |
127.8 |
125.0 |
N |
CA |
C |
HA |
242.1 |
246.5 |
CB |
CA |
C |
HA |
114.3 |
121.5 |
C |
CA |
CB |
CG |
79.8 |
299.4 |
C |
CA |
CB |
HB2 |
202.5 |
179.7 |
C |
CA |
CB |
HB3 |
316.1 |
62.1 |
O |
C |
CA |
OXT |
|
178.2 |
CA |
C |
OXT |
HXT |
|
178.3 |
CB |
CA |
N |
H |
39.7 |
139.1 |
CB |
CA |
N |
H2 |
185.7 |
332.4 |
N |
CA |
CB |
C |
227.2 |
237.4 |
N |
CA |
CB |
HA |
111.9 |
116.8 |
C |
CA |
CB |
HA |
244.7 |
239.4 |
CB |
CA |
C |
O |
8.6 |
271.5 |
CB |
CA |
C |
OXT |
|
93.3 |
CG |
CB |
CA |
HB2 |
237.2 |
119.7 |
CG |
CB |
CA |
HB3 |
123.7 |
237.3 |
CA |
CB |
CG |
OD1 |
151.7 |
119.4 |
CA |
CB |
CG |
ND2 |
332.2 |
298.5 |
HB2 |
CB |
CA |
HB3 |
246.4 |
117.6 |
HA |
CA |
N |
H |
150.7 |
258.6 |
HA |
CA |
N |
H2 |
296.7 |
92.0 |
N |
CA |
HA |
C |
125.7 |
115.5 |
N |
CA |
HA |
CB |
246.7 |
238.7 |
C |
CA |
HA |
CB |
121.0 |
123.2 |
HA |
CA |
C |
O |
254.3 |
150.0 |
HA |
CA |
C |
OXT |
|
331.8 |
HA |
CA |
CB |
CG |
195.0 |
60.0 |
HA |
CA |
CB |
HB2 |
317.8 |
300.3 |
HA |
CA |
CB |
HB3 |
71.3 |
182.7 |
O |
C |
CA |
CB |
8.6 |
271.5 |
O |
C |
CA |
HA |
254.3 |
150.0 |
CA |
C |
O |
OXT |
|
182.0 |
O |
C |
OXT |
HXT |
|
0.0 |
OXT |
C |
CA |
CB |
|
93.3 |
OXT |
C |
CA |
HA |
|
331.8 |
CA |
C |
OXT |
O |
|
178.2 |
CG |
CB |
CA |
HA |
195.0 |
60.0 |
CA |
CB |
CG |
HB2 |
124.2 |
238.6 |
CA |
CB |
CG |
HB3 |
235.8 |
123.4 |
HB2 |
CB |
CG |
HB3 |
111.6 |
244.8 |
OD1 |
CG |
CB |
ND2 |
179.6 |
180.8 |
CB |
CG |
ND2 |
HD21 |
354.8 |
180.3 |
CB |
CG |
ND2 |
HD22 |
174.6 |
0.3 |
HB2 |
CB |
CA |
HA |
317.8 |
300.3 |
CA |
CB |
HB2 |
CG |
232.6 |
123.4 |
CA |
CB |
HB2 |
HB3 |
117.5 |
240.2 |
CG |
CB |
HB2 |
HB3 |
244.8 |
116.8 |
HB2 |
CB |
CG |
OD1 |
27.5 |
240.8 |
HB2 |
CB |
CG |
ND2 |
208.0 |
60.0 |
HB3 |
CB |
CA |
HA |
71.3 |
182.7 |
CA |
CB |
HB3 |
CG |
127.7 |
235.0 |
CA |
CB |
HB3 |
HB2 |
242.1 |
119.6 |
CG |
CB |
HB3 |
HB2 |
114.4 |
244.6 |
HB3 |
CB |
CG |
OD1 |
275.9 |
356.0 |
HB3 |
CB |
CG |
ND2 |
96.3 |
175.2 |
OD1 |
CG |
CB |
HB2 |
27.5 |
240.8 |
OD1 |
CG |
CB |
HB3 |
275.9 |
356.0 |
CB |
CG |
OD1 |
ND2 |
180.4 |
179.1 |
OD1 |
CG |
ND2 |
HD21 |
175.2 |
359.5 |
OD1 |
CG |
ND2 |
HD22 |
355.0 |
179.4 |
ND2 |
CG |
CB |
HB2 |
208.0 |
60.0 |
ND2 |
CG |
CB |
HB3 |
96.3 |
175.2 |
CB |
CG |
ND2 |
OD1 |
179.6 |
180.9 |
HD21 |
ND2 |
CG |
HD22 |
180.2 |
180.1 |
CG |
ND2 |
HD21 |
HD22 |
179.8 |
180.0 |
CG |
ND2 |
HD22 |
HD21 |
180.2 |
180.1 |