PDB Chemical Component DPR

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for DPR

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N CA 1.452 1.475
N CD 1.460 1.478
N H 1.000 1.009
CA CB 1.520 1.543
CA C 1.531 1.507
CA HA 1.100 1.090
CB CG 1.520 1.551
CB HB2 1.100 1.090
CB HB3 1.100 1.090
CG CD 1.520 1.549
CG HG2 1.100 1.091
CG HG3 1.100 1.090
CD HD2 1.100 1.090
CD HD3 1.100 1.090
C O 1.229 1.208
C OXT   1.342
OXT HXT   0.967

Bond Angles for DPR

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
CA N CD 113.1 108.6
CA N H 108.3 111.0
N CA CB 104.9 107.2
N CA C 111.0 109.9
N CA HA 112.8 109.9
CD N H 108.3 111.0
N CD CG 104.7 104.8
N CD HD2 111.1 110.4
N CD HD3 111.1 110.4
CB CA C 113.0 109.9
CB CA HA 110.7 109.9
CA CB CG 105.9 103.0
CA CB HB2 110.7 110.6
CA CB HB3 110.6 110.7
C CA HA 104.6 110.0
CA C O 120.4 120.0
CA C OXT   120.0
CG CB HB2 110.7 110.7
CG CB HB3 110.7 110.7
CB CG CD 107.8 101.7
CB CG HG2 110.0 111.0
CB CG HG3 110.0 111.0
HB2 CB HB3 108.2 110.8
CD CG HG2 110.0 111.0
CD CG HG3 110.0 111.0
CG CD HD2 111.1 110.3
CG CD HD3 111.1 110.4
HG2 CG HG3 108.9 110.9
HD2 CD HD3 107.8 110.4
O C OXT   120.0
C OXT HXT   117.0

Torsion Angles for DPR

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
CD N CA H 240.0 237.7
CA N CD CG 351.3 335.9
CA N CD HD2 111.3 94.7
CA N CD HD3 231.3 217.1
CB CA N C 122.4 119.4
CB CA N HA 239.4 240.6
N CA CB CG 341.3 22.3
N CA CB HB2 101.3 140.7
N CA CB HB3 221.3 263.9
C CA N HA 117.0 121.2
N CA C O 67.2 18.6
N CA C OXT   198.5
CA N CD H 120.0 122.3
CD N CA CB 17.4 1.0
CD N CA C 255.0 241.6
CD N CA HA 138.0 120.4
CB CG CD N 356.2 37.1
N CD CG HG2 236.2 279.0
N CD CG HG3 116.1 155.1
CG CD N HD2 240.0 241.2
CG CD N HD3 120.0 118.9
HD2 CD N HD3 240.0 237.6
CA N H CD 237.1 239.1
H N CA CB 137.4 123.3
H N CA C 15.0 3.9
H N CA HA 258.0 242.7
H N CD CG 231.4 213.6
H N CD HD2 351.3 332.4
H N CD HD3 111.4 94.7
CB CA N CD 17.4 1.0
CB CA N H 137.4 123.3
N CA CB C 238.9 240.6
N CA CB HA 121.9 119.4
C CA CB HA 243.0 238.7
CB CA C O 309.6 260.9
CB CA C OXT   80.8
CG CB CA HB2 240.0 241.6
CG CB CA HB3 120.0 118.4
CA CB CG CD 14.0 324.3
CA CB CG HG2 134.0 82.4
CA CB CG HG3 254.0 206.2
HB2 CB CA HB3 240.0 236.8
C CA N CD 255.0 241.6
C CA N H 15.0 3.9
N CA C CB 117.6 117.7
N CA C HA 238.1 238.9
CB CA C HA 120.5 121.2
C CA CB CG 102.4 141.7
C CA CB HB2 222.4 260.0
C CA CB HB3 342.4 23.2
O C CA OXT   180.1
CA C OXT HXT   180.1
HA CA N CD 138.0 120.4
HA CA N H 258.0 242.7
N CA HA CB 242.8 242.3
N CA HA C 120.7 121.1
CB CA HA C 238.0 238.8
HA CA CB CG 219.4 262.9
HA CA CB HB2 339.4 21.3
HA CA CB HB3 99.4 144.5
HA CA C O 189.1 139.7
HA CA C OXT   319.6
N CD CG CB 356.2 37.1
CG CB CA C 102.4 141.7
CG CB CA HA 219.4 262.9
CA CB CG HB2 120.0 118.3
CA CB CG HB3 240.0 241.6
HB2 CB CG HB3 120.0 123.3
CD CG CB HG2 240.0 241.9
CD CG CB HG3 120.0 118.1
CB CG CD HD2 236.1 278.2
CB CG CD HD3 116.2 155.9
HG2 CG CB HG3 240.0 236.2
HB2 CB CA C 222.4 260.0
HB2 CB CA HA 339.4 21.3
CA CB HB2 CG 242.8 246.4
CA CB HB2 HB3 121.4 123.2
CG CB HB2 HB3 238.6 236.8
HB2 CB CG CD 254.0 206.0
HB2 CB CG HG2 14.0 324.1
HB2 CB CG HG3 134.0 87.9
HB3 CB CA C 342.4 23.2
HB3 CB CA HA 99.4 144.5
CA CB HB3 CG 117.1 113.6
CA CB HB3 HB2 238.6 236.9
CG CB HB3 HB2 121.4 123.2
HB3 CB CG CD 134.0 82.7
HB3 CB CG HG2 254.0 200.8
HB3 CB CG HG3 14.0 324.6
CG CD N H 231.4 213.6
N CD CG HD2 120.0 118.8
N CD CG HD3 240.0 241.1
CD CG CB HB2 254.0 206.0
CD CG CB HB3 134.0 82.7
CB CG CD HG2 120.0 118.1
CB CG CD HG3 240.0 241.9
HG2 CG CD HG3 120.0 123.8
HD2 CD CG HD3 120.0 122.3
HG2 CG CB HB2 14.0 324.1
HG2 CG CB HB3 254.0 200.8
CB CG HG2 CD 241.3 247.7
CB CG HG2 HG3 120.7 123.8
CD CG HG2 HG3 239.3 236.1
HG2 CG CD HD2 116.2 160.2
HG2 CG CD HD3 356.2 37.8
HG3 CG CB HB2 134.0 87.9
HG3 CG CB HB3 14.0 324.6
CB CG HG3 CD 118.7 112.3
CB CG HG3 HG2 239.3 236.2
CD CG HG3 HG2 120.7 123.9
HG3 CG CD HD2 356.1 36.3
HG3 CG CD HD3 236.2 274.0
HD2 CD N H 351.3 332.4
N CD HD2 CG 243.9 244.7
N CD HD2 HD3 122.0 122.3
HD2 CD CG HG2 116.2 160.2
HD2 CD CG HG3 356.1 36.3
CG CD HD2 HD3 238.1 237.7
HD3 CD N H 111.4 94.7
N CD HD3 CG 116.1 115.4
N CD HD3 HD2 238.0 237.7
HD3 CD CG HG2 356.2 37.8
HD3 CD CG HG3 236.2 274.0
CG CD HD3 HD2 121.9 122.3
O C CA HA 189.1 139.7
CA C O OXT   179.9
O C OXT HXT   0.0
OXT C CA HA   319.6
CA C OXT O   180.1