PDB Chemical Component DP2

Ideal Model

Chemical Description

Name L-LYSYL-N~5~-[(Z)-(2,2-DIHYDROXYHYDRAZINO)(IMINO)METHYL]-L-ORNITHINAMIDE
Synonyms D-LYSINE-D-NITROARGININE AMIDE
Formula C12 H28 N8 O4
Formal charge 0
Molecular weight 348.402 g/mol
Component type NON-POLYMER

Chemical features

Atom count 52
Chiral atom count 2
Chiral atoms CA CA'
Bond count 51
Aromatic bond count 0

Chemical Identifiers

Systematic name (ACDLabs) D-lysyl-N~5~-[(E)-(2,2-dihydroxyhydrazino)(imino)methyl]-D-ornithinamide
Systematic name (OpenEye OEToolkits) (2R)-2,6-diamino-N-[(2R)-1-amino-5-[[N-(dihydroxyamino)carbamimidoyl]amino]-1-oxo-pentan-2-yl]hexanamide

Chemical Descriptors

Stereo SMILES (CACTVS) NCCCC[C@@H](N)C(=O)N[C@H](CCCNC(=N)NN(O)O)C(N)=O
SMILES (CACTVS) NCCCC[CH](N)C(=O)N[CH](CCCNC(=N)NN(O)O)C(N)=O
Stereo SMILES (OpenEye) C(CCN)C[C@H](C(=O)N[C@H](CCCNC(=N)NN(O)O)C(=O)N)N
InChI descriptor InChI=1S/C12H28N8O4/c13-6-2-1-4-8(14)11(22)18-9(10(15)21)5-3-7-17-12(16)19-20(23)24/h8-9,23-24H,1-7,13-14H2,(H2,15,21)(H,18,22)(H3,16,17,19)/t8-,9-/m1/s1
InChIKey descriptor VKBOUZQMRKGFCB-RKDXNWHRSA-N

Status Information

Last modified 2021-03-01
Created 2003-12-18
Release status REL
Model PDB code 1RS6
Processing site RCSB