PDB Chemical Component DP

Ideal Model

Chemical Description

Name [(2~{R},3~{S},5~{R})-5-(2-azanyl-4-oxidanylidene-imidazo[1,2-a][1,3,5]triazin-8-yl)-3-oxidanyl-oxolan-2-yl]methyl dihydrogen phosphate
Formula C10 H14 N5 O7 P
Formal charge 0
Molecular weight 347.221 g/mol
Component type DNA linking

Chemical features

Atom count 37
Chiral atom count 3
Chiral atoms C4' C1' C3'
Observed leaving atoms OP3
Bond count 39
Aromatic bond count 0

Chemical Identifiers

Systematic name (OpenEye OEToolkits) [(2~{R},3~{S},5~{R})-5-(2-azanyl-4-oxidanylidene-imidazo[1,2-a][1,3,5]triazin-8-yl)-3-oxidanyl-oxolan-2-yl]methyl dihydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) NC1=NC(=O)N2C=CN([C@H]3C[C@H](O)[C@@H](CO[P](O)(O)=O)O3)C2=N1
SMILES (CACTVS) NC1=NC(=O)N2C=CN([CH]3C[CH](O)[CH](CO[P](O)(O)=O)O3)C2=N1
Stereo SMILES (OpenEye) C1[C@@H]([C@H](O[C@H]1N2C=CN3C2=NC(=NC3=O)N)COP(=O)(O)O)O
InChI descriptor InChI=1S/C10H14N5O7P/c11-8-12-9-14(1-2-15(9)10(17)13-8)7-3-5(16)6(22-7)4-21-23(18,19)20/h1-2,5-7,16H,3-4H2,(H2,11,13,17)(H2,18,19,20)/t5-,6+,7+/m0/s1
InChIKey descriptor DRTOAYSVOYBQME-RRKCRQDMSA-N

Status Information

Last modified 2019-06-07
Created 2018-11-12
Release status REL
Model PDB code 6I4O
Processing site EBI