PDB Chemical Component DOI

Ideal Model

Chemical Description

Name 9-(2-DEOXY-5-O-PHOSPHONO-BETA-D-ERYTHRO-PENTOFURANOSYL)-6-(PHOSPHONOOXY)-9H-PURINE
Synonyms 2'-DEOXY-IMP
Formula C10 H14 N4 O10 P2
Formal charge 0
Molecular weight 412.186 g/mol
Component type NON-POLYMER

Chemical features

Atom count 40
Chiral atom count 3
Chiral atoms C4' C1' C3'
Bond count 42
Aromatic bond count 10

Chemical Identifiers

Systematic name (ACDLabs) 9-(2-deoxy-5-O-phosphono-beta-D-erythro-pentofuranosyl)-6-(phosphonooxy)-9H-purine
Systematic name (OpenEye OEToolkits) [(2R,3S,5R)-3-hydroxy-5-(6-phosphonooxypurin-9-yl)oxolan-2-yl]methyl dihydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) O[C@H]1C[C@@H](O[C@@H]1CO[P](O)(O)=O)n2cnc3c(O[P](O)(O)=O)ncnc23
SMILES (CACTVS) O[CH]1C[CH](O[CH]1CO[P](O)(O)=O)n2cnc3c(O[P](O)(O)=O)ncnc23
Stereo SMILES (OpenEye) c1nc2c(c(n1)OP(=O)(O)O)ncn2[C@H]3C[C@@H]([C@H](O3)COP(=O)(O)O)O
InChI descriptor InChI=1S/C10H14N4O10P2/c15-5-1-7(23-6(5)2-22-25(16,17)18)14-4-13-8-9(14)11-3-12-10(8)24-26(19,20)21/h3-7,15H,1-2H2,(H2,16,17,18)(H2,19,20,21)/t5-,6+,7+/m0/s1
InChIKey descriptor GEECATYOCBMMIR-RRKCRQDMSA-N

Status Information

Last modified 2021-03-01
Created 2006-03-16
Release status REL
Model PDB code 2DGN
Processing site RCSB