PDB Chemical Component DNC

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for DNC

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 O1 1.337 1.359
C1 C2 1.443 1.396
C1 C6 1.413 1.376
O1 HO1 0.950 0.966
C2 O2 1.350 1.353
C2 C3 1.454 1.414
O2 HO2 0.951 0.967
C3 N1 1.504 1.341
C3 C4 1.429 1.401
N1 O3 1.221 1.218
N1 O4 1.233 1.217
C4 C5 1.431 1.400
C4 H4 1.103 1.080
C5 N2 1.459 1.342
C5 C6 1.408 1.411
N2 O5 1.192 1.217
N2 O6 1.193 1.218
C6 H6 1.102 1.080

Bond Angles for DNC

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O1 C1 C2 121.4 119.9
O1 C1 C6 116.5 119.8
C1 O1 HO1 121.4 106.8
C2 C1 C6 122.0 120.3
C1 C2 O2 117.4 119.9
C1 C2 C3 119.3 120.1
C1 C6 C5 118.7 120.4
C1 C6 H6 120.8 119.8
O2 C2 C3 123.3 120.0
C2 O2 HO2 117.4 106.8
C2 C3 N1 124.9 120.2
C2 C3 C4 117.4 119.7
N1 C3 C4 117.7 120.2
C3 N1 O3 124.2 120.0
C3 N1 O4 118.2 120.0
C3 C4 C5 121.8 119.7
C3 C4 H4 119.0 120.1
O3 N1 O4 117.6 120.0
C5 C4 H4 119.2 120.2
C4 C5 N2 119.9 120.0
C4 C5 C6 120.8 120.0
N2 C5 C6 119.3 120.0
C5 N2 O5 119.5 120.0
C5 N2 O6 120.4 120.0
C5 C6 H6 120.5 119.8
O5 N2 O6 120.0 120.0

Torsion Angles for DNC

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C2 C1 O1 C6 179.0 179.7
O1 C1 C2 O2 2.4 0.2
O1 C1 C2 C3 181.4 179.8
O1 C1 C6 C5 178.5 180.0
O1 C1 C6 H6 358.5 360.0
O1 C1 C2 C6 181.1 180.3
C2 C1 O1 HO1 180.0 269.8
C2 C1 C6 C5 359.6 0.3
C2 C1 C6 H6 179.6 180.2
O2 C2 C1 C3 181.1 180.4
C1 C2 O2 HO2 180.0 269.5
C1 C2 C3 N1 178.4 180.3
C1 C2 C3 C4 360.0 0.5
O1 C1 C6 C2 179.0 179.7
C6 C1 O1 HO1 1.0 90.1
C6 C1 C2 O2 181.4 179.9
C6 C1 C2 C3 0.3 359.5
C4 C5 C6 C1 0.3 359.9
N2 C5 C6 C1 180.6 179.9
C5 C6 C1 H6 180.0 180.1
HO1 O1 C1 C2 180.0 269.8
HO1 O1 C1 C6 1.0 90.1
O2 C2 C1 C6 181.4 179.9
C1 C2 O2 C3 178.9 179.6
O2 C2 C3 N1 357.3 359.9
O2 C2 C3 C4 178.8 180.0
C3 C2 C1 C6 0.3 359.5
C1 C2 C3 O2 181.1 180.4
C3 C2 O2 HO2 1.1 89.9
N1 C3 C2 C4 178.5 179.8
C2 C3 N1 O3 0.1 180.2
C2 C3 N1 O4 180.1 0.2
C2 C3 C4 C5 359.9 359.8
C2 C3 C4 H4 179.9 179.8
HO2 O2 C2 C3 1.1 89.9
C2 C3 N1 C4 181.5 180.2
N1 C3 C4 C5 181.3 179.9
N1 C3 C4 H4 1.3 360.0
O3 N1 C3 O4 180.0 180.0
C2 C3 C4 N1 178.6 179.8
C4 C3 N1 O3 178.6 360.0
C4 C3 N1 O4 358.6 180.0
C5 C4 C3 H4 180.0 180.0
C3 C4 C5 N2 179.6 180.0
C3 C4 C5 C6 359.9 0.0
O3 N1 C3 C4 178.6 360.0
C3 N1 O3 O4 180.0 180.0
O4 N1 C3 C4 358.6 180.0
C3 N1 O4 O3 180.0 180.0
C1 C6 C5 C4 0.3 359.9
C3 C4 C5 H4 180.0 180.0
N2 C5 C4 C6 179.7 180.0
C4 C5 N2 O5 1.4 180.0
C4 C5 N2 O6 179.9 360.0
C4 C5 C6 H6 180.3 180.0
C3 C4 H4 C5 180.0 180.0
H4 C4 C5 N2 359.7 0.0
H4 C4 C5 C6 179.9 180.0
C1 C6 C5 N2 180.6 179.9
N2 C5 C4 H4 359.7 0.0
C4 C5 N2 C6 180.3 180.0
N2 C5 C6 H6 0.6 360.0
O5 N2 C5 O6 181.5 180.1
C1 C6 C5 H6 180.0 179.9
C6 C5 C4 H4 179.9 180.0
C4 C5 C6 N2 179.7 180.0
C6 C5 N2 O5 181.1 0.0
C6 C5 N2 O6 359.7 180.0
O5 N2 C5 C6 181.1 0.0
C5 N2 O5 O6 178.5 179.9
O6 N2 C5 C6 359.7 180.0
C5 N2 O6 O5 181.5 180.1
C1 C6 H6 C5 180.0 180.1