PDB Chemical Component DMU

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for DMU

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C40	C37	1.528	1.530
C40	C43	1.518	1.530
C37	C34	1.526	1.530
C34	C31	1.524	1.530
C31	C28	1.526	1.530
C28	C25	1.522	1.530
C22	C25	1.521	1.530
C22	C19	1.515	1.529
O61	C57	1.431	1.429
O4	C7	1.432	1.428
C18	C19	1.510	1.530
C18	O16	1.424	1.429
O5	C6	1.423	1.430
O5	C4	1.431	1.429
C57	C4	1.528	1.530
C6	O16	1.428	1.428
C6	C1	1.517	1.531
C7	C5	1.516	1.532
C7	C8	1.507	1.532
C4	C3	1.548	1.530
O1	C10	1.435	1.429
O1	C9	1.431	1.429
C10	C5	1.524	1.531
C10	O7	1.422	1.429
C5	O3	1.442	1.429
O49	C1	1.440	1.429
C8	C9	1.533	1.531
C8	O2	1.435	1.429
C1	C2	1.506	1.532
C11	C9	1.532	1.529
C11	O6	1.442	1.430
C3	O7	1.428	1.429
C3	C2	1.523	1.532
C2	O55	1.433	1.430
C1	H1	1.100	1.090
C2	H2	1.101	1.090
C3	H3	1.100	1.089
C4	H4	1.100	1.089
C6	H5	1.100	1.090
C18	H6	1.100	1.090
C18	H7	1.100	1.089
C19	H8	1.100	1.090
C19	H9	1.100	1.090
C22	H10	1.100	1.090
C22	H11	1.100	1.090
C25	H12	1.100	1.090
C25	H13	1.100	1.091
C28	H14	1.100	1.089
C28	H15	1.100	1.090
C31	H16	1.100	1.089
C31	H17	1.100	1.090
C34	H18	1.101	1.090
C34	H19	1.100	1.089
C37	H20	1.099	1.090
C37	H21	1.100	1.090
C40	H22	1.100	1.089
C40	H23	1.100	1.089
C43	H24	1.101	1.090
C43	H25	1.100	1.091
C43	H26	1.100	1.090
O49	H27	0.950	0.967
O55	H28	0.950	0.967
C57	H29	1.100	1.090
C57	H30	1.100	1.090
O61	H31	0.951	0.968
C5	H32	1.100	1.089
C7	H33	1.100	1.089
C8	H34	1.100	1.089
C9	H35	1.100	1.089
C10	H36	1.100	1.090
O2	H37	0.950	0.967
O3	H38	0.950	0.967
O4	H39	0.950	0.967
C11	H40	1.100	1.091
C11	H41	1.100	1.090
O6	H42	0.950	0.967

Bond Angles for DMU

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C40	C37	H20	109.2	109.4
C40	C37	H21	109.2	109.4
C43	C40	H22	108.9	109.5
C43	C40	H23	108.9	109.5
C40	C43	H24	109.5	109.5
C40	C43	H25	109.5	109.5
C40	C43	H26	109.5	109.5
C37	C34	H18	108.7	109.4
C37	C34	H19	108.7	109.5
C34	C31	H16	109.3	109.4
C34	C31	H17	109.4	109.4
C31	C28	H14	109.0	109.5
C31	C28	H15	109.0	109.4
C28	C25	H12	108.9	109.5
C28	C25	H13	108.9	109.4
C25	C22	H10	110.0	109.4
C25	C22	H11	110.0	109.5
C22	C25	H12	108.9	109.5
C22	C25	H13	108.9	109.5
C22	C19	H8	109.5	109.5
C22	C19	H9	109.5	109.5
O61	C57	H29	110.1	109.4
O61	C57	H30	110.0	109.5
O4	C7	H33	111.1	109.7
C19	C18	H6	110.2	109.4
C19	C18	H7	110.2	109.5
C18	C19	H8	109.5	109.4
C18	C19	H9	109.5	109.4
O5	C6	O16	109.3	109.5
O5	C6	H5	109.9	109.5
O5	C4	H4	105.6	109.5
C57	C4	H4	104.6	109.5
O16	C6	H5	109.9	109.5
C6	C1	H1	110.1	109.6
C7	C5	O3	112.1	109.5
C7	C5	H32	108.9	109.5
C7	C8	C9	111.5	109.2
C7	C8	O2	104.1	109.5
C8	C7	H33	110.0	109.6
C7	C8	H34	110.5	109.6
C4	C3	O7	109.2	109.5
C4	C3	H3	108.1	109.6
O1	C10	H36	108.7	109.5
O1	C9	H35	108.4	109.5
C10	C5	O3	108.5	109.5
C10	C5	H32	108.8	109.5
O3	C5	H32	109.9	109.5
C5	O3	H38	109.5	114.0
O49	C1	H1	111.2	109.5
C9	C8	O2	108.8	109.5
C9	C8	H34	110.2	109.5
C8	C9	H35	107.1	109.5
O2	C8	H34	111.6	109.6
C8	O2	H37	109.5	114.0
C1	C2	O55	109.1	109.5
C2	C1	H1	110.2	109.5
C1	C2	H2	109.3	109.6
C11	C9	H35	107.1	109.5
O6	C11	H40	109.5	109.4
O6	C11	H41	109.5	109.4
C11	O6	H42	109.5	114.0
O7	C3	H3	109.6	109.5
C3	C2	O55	112.8	109.5
C3	C2	H2	109.1	109.6
O55	C2	H2	110.3	109.5
C2	O55	H28	109.5	114.0
H6	C18	H7	109.5	109.5
H8	C19	H9	109.5	109.5
H10	C22	H11	109.5	109.4
H12	C25	H13	109.5	109.5
H14	C28	H15	109.5	109.5
H16	C31	H17	109.5	109.5
H18	C34	H19	109.5	109.5
H20	C37	H21	109.5	109.5
H22	C40	H23	109.5	109.5
H24	C43	H25	109.4	109.5
H24	C43	H26	109.5	109.5
H25	C43	H26	109.5	109.4
H29	C57	H30	109.5	109.5
H40	C11	H41	109.4	109.4

Torsion Angles for DMU

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C40	C37	C34	H18	268.2	60.0
C40	C37	C34	H19	27.3	300.0
H20	C37	C40	H21	240.3	120.0
C43	C40	C37	H20	63.5	60.0
C43	C40	C37	H21	183.1	300.0
H22	C40	C43	H23	119.3	120.0
H24	C43	C40	H25	240.0	240.0
H24	C43	C40	H26	120.0	120.0
H25	C43	C40	H26	240.0	240.1
C37	C34	C31	H16	344.1	60.0
C37	C34	C31	H17	104.0	300.1
H18	C34	C37	H19	240.8	120.0
C34	C31	C28	H14	284.8	60.0
C34	C31	C28	H15	44.2	300.0
H16	C31	C34	H17	240.1	120.0
C31	C28	C25	H12	192.2	59.9
C31	C28	C25	H13	311.5	300.0
H14	C28	C31	H15	240.6	120.0
C28	C25	C22	H10	274.9	60.0
C28	C25	C22	H11	35.6	300.0
C22	C25	C28	H12	239.7	120.0
C22	C25	C28	H13	120.3	240.0
H12	C25	C28	H13	240.6	120.0
C28	C25	C22	H12	120.3	240.0
C28	C25	C22	H13	239.6	120.0
C25	C22	C19	H8	304.3	60.0
C25	C22	C19	H9	64.3	300.0
H10	C22	C25	H11	239.3	119.9
H12	C25	C22	H13	119.3	240.0
C22	C19	C18	H6	277.8	60.0
C22	C19	C18	H7	38.7	300.0
C18	C19	C22	H8	240.0	120.0
C18	C19	C22	H9	120.0	240.0
H8	C19	C22	H9	239.9	120.0
O61	C57	C4	H4	287.8	304.2
H29	C57	O61	H30	239.2	120.0
O4	C7	C5	H32	67.7	303.2
C8	C7	O4	H33	122.6	120.3
O4	C7	C8	H34	302.3	56.9
C22	C19	C18	H8	120.0	240.0
C22	C19	C18	H9	240.0	120.0
H6	C18	C19	H7	239.0	120.0
H8	C19	C18	H9	120.1	240.0
C18	O16	C6	H5	65.7	55.0
C6	O5	C4	H4	210.7	301.2
O16	C6	O5	H5	120.6	120.0
O5	C6	C1	H1	167.3	297.7
C57	C4	O5	H4	247.8	240.0
O5	C4	C3	O7	270.4	182.5
O5	C4	C3	H3	151.2	62.3
O5	C4	C57	H4	112.9	120.0
C57	C4	C3	H3	21.0	302.3
O5	C6	O16	H5	239.3	240.0
O16	C6	C1	H1	287.2	57.6
O49	C1	C6	H1	236.6	239.8
C6	C1	C2	O55	304.8	183.1
C2	C1	C6	H1	118.9	119.9
C6	C1	C2	H2	184.0	63.0
C10	C5	C7	O3	119.8	119.9
C10	C5	C7	H32	241.7	240.0
O3	C5	C7	H32	121.9	120.1
C7	C5	O3	H38	180.0	179.9
O4	C7	C8	H33	236.8	239.7
C8	C7	C5	O3	308.6	183.1
C8	C7	C5	H32	186.7	63.0
C9	C8	C7	O2	242.9	240.2
C9	C8	C7	H34	122.9	119.9
C7	C8	C9	H35	111.9	62.3
O2	C8	C7	H34	240.0	239.8
C7	C8	O2	H37	180.0	60.0
O7	C3	C4	H3	119.2	120.2
C4	C3	C2	O55	73.2	176.9
C4	C3	C2	H2	196.2	297.1
C10	O1	C9	H35	300.7	301.1
O1	C10	C5	O3	101.2	177.4
O1	C10	C5	H32	220.7	297.5
O1	C9	C8	O2	239.4	182.5
O1	C9	C8	H34	116.8	62.3
C8	C9	O1	H35	117.4	120.0
C11	C9	O1	H35	242.6	239.9
C7	C5	C10	O3	237.9	240.1
C7	C5	C10	H32	118.4	120.0
O3	C5	C10	H32	240.5	239.9
C10	C5	O3	H38	60.2	60.1
C10	O7	C3	H3	106.7	325.1
C7	C5	O3	H32	238.7	239.9
C10	C5	O3	H32	118.8	120.1
C6	C1	O49	H1	122.7	120.2
O49	C1	C2	O55	185.9	63.2
C2	C1	O49	H1	238.3	239.9
O49	C1	C2	H2	65.1	303.0
C7	C8	C9	O2	114.2	119.8
C9	C8	C7	H33	188.4	297.2
C7	C8	C9	H34	236.9	240.0
O1	C9	C8	H35	241.8	240.1
O2	C8	C9	H34	122.6	120.2
C9	C8	O2	H37	299.0	179.7
C11	C9	C8	H35	116.9	120.1
C7	C8	O2	C9	241.0	240.4
O2	C8	C7	H33	305.5	57.0
C7	C8	O2	H34	119.2	120.2
C9	C8	O2	H34	238.2	239.9
O2	C8	C9	H35	357.6	302.5
C6	C1	C2	H1	241.2	240.1
O49	C1	C2	H1	122.3	120.1
C3	C2	C1	O55	121.8	119.9
C3	C2	C1	H2	242.5	240.0
O55	C2	C1	H2	120.8	120.1
C1	C2	O55	H28	180.0	300.0
O1	C9	C11	H35	118.2	120.0
C11	C9	C8	H34	351.9	302.4
C8	C9	C11	H35	243.1	239.9
O6	C11	C9	H35	41.5	305.1
H40	C11	O6	H41	120.0	119.9
C4	C3	O7	H3	241.8	239.7
O7	C3	C2	O55	194.3	296.8
O7	C3	C2	H2	317.2	56.9
C1	C2	C3	O55	240.6	240.1
C3	C2	C1	H1	185.3	62.9
C1	C2	C3	H2	117.6	120.0
O55	C2	C3	H2	237.0	239.8
C3	C2	O55	H28	62.4	180.4
O55	C2	C1	H1	63.5	303.1
C1	C2	O55	H2	239.8	239.8
C3	C2	O55	H2	122.2	120.3
H1	C1	C2	O55	63.5	303.1
H1	C1	C2	H2	302.8	182.9
C1	C2	H2	O55	120.0	120.2
H2	C2	C1	H1	302.8	182.9
C3	C2	H2	O55	235.6	239.8
H2	C2	O55	H28	300.2	60.2
C4	C3	H3	O7	118.9	120.2
H3	C3	C2	O55	311.9	56.9
H3	C3	C2	H2	74.9	177.1
H4	C4	C3	O7	26.1	302.5
H4	C4	C3	H3	266.9	182.3
O5	C6	H5	O16	120.3	120.0
H5	C6	C1	H1	47.7	177.7
C19	C18	H6	H7	121.4	240.0
H6	C18	C19	H8	157.8	180.0
H6	C18	C19	H9	37.7	300.0
C19	C18	H7	H6	238.6	120.0
H7	C18	C19	H8	278.8	60.0
H7	C18	C19	H9	158.7	180.0
C22	C19	H8	H9	120.1	240.0
H8	C19	C18	H6	157.8	180.0
H8	C19	C18	H7	278.8	60.0
C18	C19	H8	H9	239.9	120.0
C22	C19	H9	H8	240.0	120.0
H9	C19	C18	H6	37.7	300.0
H9	C19	C18	H7	158.7	180.0
C18	C19	H9	H8	120.1	240.0
C25	C22	H10	H11	121.0	240.0
H10	C22	C25	H12	154.6	180.0
H10	C22	C25	H13	35.2	300.0
H10	C22	C19	H8	184.7	180.0
H10	C22	C19	H9	304.7	60.0
C25	C22	H11	H10	239.0	119.9
H11	C22	C25	H12	275.3	60.1
H11	C22	C25	H13	156.0	180.1
H11	C22	C19	H8	63.9	300.0
H11	C22	C19	H9	184.0	180.0
C28	C25	H12	H13	119.0	240.1
H12	C25	C22	H10	154.6	180.0
H12	C25	C22	H11	275.3	60.1
C22	C25	H12	H13	241.0	120.0
C28	C25	H13	H12	241.0	120.0
H13	C25	C22	H10	35.2	300.0
H13	C25	C22	H11	156.0	180.1
C22	C25	H13	H12	119.0	240.0
C31	C28	H14	H15	119.1	240.0
H14	C28	C25	H12	71.9	179.9
H14	C28	C25	H13	191.3	60.0
C31	C28	H15	H14	240.8	120.0
H15	C28	C25	H12	312.4	300.0
H15	C28	C25	H13	71.8	180.0
C34	C31	H16	H17	119.8	240.0
H16	C31	C28	H14	164.7	180.0
H16	C31	C28	H15	284.2	60.0
C34	C31	H17	H16	240.2	119.9
H17	C31	C28	H14	44.8	300.0
H17	C31	C28	H15	164.3	180.0
C37	C34	H18	H19	118.7	240.0
H18	C34	C31	H16	223.7	180.0
H18	C34	C31	H17	343.6	60.0
C37	C34	H19	H18	241.3	120.0
H19	C34	C31	H16	104.6	300.0
H19	C34	C31	H17	224.4	180.0
C40	C37	H20	H21	119.5	240.0
H20	C37	C34	H18	148.0	180.0
H20	C37	C34	H19	267.1	60.0
C40	C37	H21	H20	240.5	119.9
H21	C37	C34	H18	28.3	300.0
H21	C37	C34	H19	147.5	180.0
H22	C40	C37	H20	183.8	179.9
H22	C40	C37	H21	303.5	60.0
C43	C40	H22	H23	241.1	240.0
H22	C40	C43	H24	59.6	180.0
H22	C40	C43	H25	179.6	300.0
H22	C40	C43	H26	299.6	60.0
H23	C40	C37	H20	303.1	300.0
H23	C40	C37	H21	62.8	180.0
C43	C40	H23	H22	118.9	120.0
H23	C40	C43	H24	300.3	60.0
H23	C40	C43	H25	60.3	180.0
H23	C40	C43	H26	180.3	300.0
H24	C43	C40	H22	59.6	180.0
H24	C43	C40	H23	300.3	60.0
C40	C43	H24	H25	120.0	120.0
C40	C43	H24	H26	240.0	240.0
H25	C43	H24	H26	120.0	119.9
H25	C43	C40	H22	179.6	300.0
H25	C43	C40	H23	60.3	180.0
C40	C43	H25	H24	240.0	239.9
C40	C43	H25	H26	120.0	120.0
H24	C43	H25	H26	240.0	240.1
H26	C43	C40	H22	299.6	60.0
H26	C43	C40	H23	180.3	300.0
C40	C43	H26	H24	120.0	120.1
C40	C43	H26	H25	240.0	240.0
H24	C43	H26	H25	120.0	119.9
H27	O49	C1	H1	57.2	300.1
H28	O55	C2	H2	300.2	60.2
O61	C57	H29	H30	121.1	240.0
H29	C57	C4	H4	168.1	64.2
O61	C57	H30	H29	238.9	120.0
H30	C57	C4	H4	47.4	184.2
H31	O61	C57	H29	299.6	60.0
H31	O61	C57	H30	60.4	300.0
C7	C5	H32	O3	123.2	120.1
C10	C5	H32	O3	241.3	239.9
H32	C5	O3	H38	301.3	300.0
H33	C7	C5	O3	66.3	303.0
H33	C7	C5	H32	304.4	182.9
H33	C7	C8	C9	188.4	297.2
H33	C7	C8	O2	305.5	57.0
H33	C7	C8	H34	65.5	177.3
C7	C8	H34	C9	123.7	119.7
C7	C8	H34	O2	244.7	239.8
H34	C8	C7	H33	65.5	177.3
C9	C8	H34	O2	121.0	120.1
H34	C8	C9	H35	235.0	182.3
H34	C8	O2	H37	60.8	299.8
H35	C9	C8	O2	357.6	302.5
H35	C9	C8	H34	235.0	182.3
H36	C10	C5	O3	220.9	297.5
H36	C10	C5	H32	340.5	57.6
H37	O2	C8	H34	60.8	299.8
H38	O3	C5	H32	301.3	300.0
H39	O4	C7	H33	302.5	60.1
H40	C11	C9	H35	161.5	65.0
O6	C11	H40	H41	239.9	240.1
H40	C11	O6	H42	60.0	60.0
H41	C11	C9	H35	281.5	185.0
O6	C11	H41	H40	120.1	119.9
H41	C11	O6	H42	300.0	300.0
H42	O6	C11	H40	60.0	60.0
H42	O6	C11	H41	300.0	300.0