PDB Chemical Component DK1

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for DK1

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
O1 C2 1.205 1.347
O1 HO1 0.950 0.967
C2 O2 1.300 1.214
C2 C1 1.511 1.483
C1 N1 1.379 1.319
C1 C3 1.372 1.399
N1 C10 1.393 1.334
C10 C9 1.437 1.406
C10 C5 1.447 1.418
C9 C8 1.393 1.362
C9 H9 1.103 1.080
C8 CL2 1.711 1.736
C8 C7 1.404 1.393
C7 C6 1.380 1.364
C7 H7 1.103 1.080
C6 CL1 1.711 1.737
C6 C5 1.451 1.403
C5 C4 1.491 1.411
C4 O3 1.246 1.356
C4 C3 1.452 1.383
O3 HO3 0.951 0.966
C3 H3 1.103 1.080

Bond Angles for DK1

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 O1 HO1 125.0 120.0
O1 C2 O2 125.0 120.1
O1 C2 C1 121.4 119.9
O2 C2 C1 113.6 120.0
C2 C1 N1 114.6 119.2
C2 C1 C3 124.0 119.2
N1 C1 C3 121.4 121.6
C1 N1 C10 122.2 121.6
C1 C3 C4 121.7 119.6
C1 C3 H3 116.3 120.2
N1 C10 C9 118.2 120.9
N1 C10 C5 119.3 120.0
C9 C10 C5 122.6 119.1
C10 C9 C8 117.5 119.8
C10 C9 H9 122.7 120.1
C10 C5 C6 115.1 119.5
C10 C5 C4 119.1 119.2
C8 C9 H9 119.8 120.1
C9 C8 CL2 119.1 119.5
C9 C8 C7 122.5 121.0
CL2 C8 C7 118.4 119.5
C8 C7 C6 119.7 120.8
C8 C7 H7 121.0 119.6
C6 C7 H7 119.3 119.5
C7 C6 CL1 114.2 120.2
C7 C6 C5 122.6 119.7
CL1 C6 C5 123.1 120.2
C6 C5 C4 125.8 121.3
C5 C4 O3 123.8 121.0
C5 C4 C3 116.3 118.0
O3 C4 C3 119.9 121.0
C4 O3 HO3 123.8 106.8
C4 C3 H3 122.0 120.2

Torsion Angles for DK1

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O2 C2 O1 C1 180.1 180.0
O1 C2 C1 N1 0.1 359.8
O1 C2 C1 C3 180.1 180.0
HO1 O1 C2 O2 180.0 360.0
HO1 O1 C2 C1 359.9 180.0
O2 C2 O1 HO1 180.0 360.0
O1 C2 O2 C1 179.9 180.0
O2 C2 C1 N1 180.0 179.8
O2 C2 C1 C3 360.0 360.0
C1 C2 O1 HO1 359.9 180.0
O1 C2 C1 O2 180.1 180.0
N1 C1 C2 C3 180.1 179.8
C2 C1 N1 C10 180.4 179.8
C2 C1 C3 C4 179.5 180.0
C2 C1 C3 H3 359.5 359.9
C2 C1 N1 C3 179.9 180.2
N1 C1 C3 C4 359.4 0.2
N1 C1 C3 H3 179.4 180.1
C1 N1 C10 C9 180.3 180.3
C1 N1 C10 C5 0.2 0.3
C2 C1 C3 N1 180.1 179.8
C3 C1 N1 C10 0.5 359.7
C5 C4 C3 C1 0.0 0.0
O3 C4 C3 C1 179.8 180.0
C4 C3 C1 H3 180.0 180.1
C10 N1 C1 C3 0.5 359.7
C9 C10 N1 C5 180.1 179.9
N1 C10 C9 C8 180.2 180.2
N1 C10 C9 H9 0.2 0.1
N1 C10 C5 C6 179.2 179.9
N1 C10 C5 C4 359.3 359.8
N1 C10 C9 C5 179.9 180.1
C9 C10 C5 C6 359.1 359.9
C9 C10 C5 C4 179.2 179.9
C8 C9 C10 H9 180.0 180.1
C10 C9 C8 CL2 180.6 179.9
C10 C9 C8 C7 0.5 360.0
N1 C10 C5 C9 180.1 179.9
C5 C10 C9 C8 0.3 0.1
C5 C10 C9 H9 180.3 180.0
C7 C6 C5 C10 0.9 0.0
CL1 C6 C5 C10 181.2 180.0
C6 C5 C10 C4 179.8 180.0
C10 C5 C4 O3 180.8 180.0
C10 C5 C4 C3 0.6 360.0
C8 C9 C10 C5 0.3 0.1
C10 C9 C8 H9 180.0 179.9
CL2 C8 C9 C7 180.1 180.0
C9 C8 C7 C6 359.4 0.0
C9 C8 C7 H7 179.4 180.0
H9 C9 C10 C5 180.3 180.0
C10 C9 H9 C8 180.0 180.1
H9 C9 C8 CL2 0.7 0.0
H9 C9 C8 C7 180.5 180.1
CL2 C8 C9 H9 0.7 0.0
C9 C8 CL2 C7 179.9 180.0
CL2 C8 C7 C6 179.3 180.0
CL2 C8 C7 H7 359.3 0.0
C7 C8 C9 H9 180.5 180.1
C9 C8 C7 CL2 180.1 180.0
C6 C7 C8 H7 180.0 180.0
C8 C7 C6 CL1 179.6 180.0
C8 C7 C6 C5 359.8 0.0
C10 C5 C6 C7 0.9 0.0
C8 C7 C6 H7 180.0 180.0
CL1 C6 C7 C5 179.7 180.0
C7 C6 C5 C4 180.7 180.0
C8 C7 H7 C6 180.0 180.0
H7 C7 C6 CL1 359.6 0.0
H7 C7 C6 C5 179.8 180.0
C10 C5 C6 CL1 181.2 180.0
CL1 C6 C7 H7 359.6 0.0
C7 C6 CL1 C5 180.3 180.0
CL1 C6 C5 C4 1.0 0.0
C10 C5 C6 C4 180.2 180.0
C5 C6 C7 H7 179.8 180.0
C7 C6 C5 CL1 179.7 180.0
C6 C5 C4 O3 1.0 0.0
C6 C5 C4 C3 180.7 180.0
C1 C3 C4 C5 0.0 0.0
C10 C5 C4 C6 179.8 180.0
O3 C4 C5 C3 180.2 180.0
C5 C4 O3 HO3 180.0 270.0
C5 C4 C3 H3 180.1 180.1
C1 C3 C4 O3 179.8 180.0
C5 C4 O3 C3 179.8 180.0
O3 C4 C3 H3 359.8 0.0
C1 C3 C4 H3 180.0 179.9
C5 C4 C3 O3 180.2 180.0
C3 C4 O3 HO3 0.2 90.0
HO3 O3 C4 C3 0.2 90.0
C1 C3 H3 C4 180.0 180.1