PDB Chemical Component DJ3

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for DJ3

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
OAB CAU 1.194 1.208
CAU OAC 1.201 1.342
CAU CAR 1.609 1.508
CAR CAQ 1.591 1.530
CAQ CAS 1.596 1.529
CAS CAW 1.579 1.530
CAF CAH 1.510 1.333
CAF CAD 1.507 1.465
CAE CAD 1.530 1.349
CAE CAG 1.521 1.464
CAK CAG 1.523 1.334
CAK CAV 1.566 1.508
CAW CAV 1.507 1.530
CAW OAT 1.502 1.429
CAH CAM 1.506 1.507
CAV OAT 1.459 1.429
CAM CAI 1.535 1.507
CAI CAJ 1.489 1.310
CAN CAJ 1.488 1.506
CAN CAP 1.468 1.531
CAO CAP 1.496 1.530
CAO CAL 1.530 1.530
CAL CAA 1.516 1.530
OAC H1 0.950 0.967
CAR HAY 1.100 1.089
CAR HAX 1.100 1.090
CAQ HAV 1.100 1.090
CAQ HAW 1.100 1.090
CAS HAZ 1.100 1.090
CAS HA0 1.100 1.090
CAW HA2 1.100 1.091
CAV HA1 1.100 1.089
CAK HAK 1.080 1.080
CAG HAG 1.080 1.080
CAE HAE 1.080 1.079
CAD HAD 1.080 1.080
CAF HAF 1.080 1.081
CAH HAH 1.080 1.080
CAM HAN 1.100 1.090
CAM HAO 1.100 1.090
CAI HAI 1.080 1.080
CAJ HAJ 1.079 1.081
CAN HAP 1.100 1.090
CAN HAQ 1.100 1.090
CAP HAT 1.100 1.090
CAP HAU 1.100 1.089
CAO HAS 1.100 1.090
CAO HAR 1.100 1.089
CAL HAM 1.100 1.089
CAL HAL 1.100 1.090
CAA HAC 1.100 1.089
CAA HAB 1.100 1.090
CAA HAA 1.100 1.090

Bond Angles for DJ3

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
OAB CAU OAC 120.7 120.0
OAB CAU CAR 122.6 120.0
OAC CAU CAR 116.5 120.0
CAU OAC H1 109.5 117.0
CAU CAR CAQ 112.9 109.5
CAU CAR HAY 108.6 109.4
CAU CAR HAX 108.6 109.5
CAR CAQ CAS 114.5 109.5
CAQ CAR HAY 108.6 109.5
CAQ CAR HAX 108.6 109.5
CAR CAQ HAV 108.2 109.5
CAR CAQ HAW 108.2 109.4
CAQ CAS CAW 111.2 109.5
CAS CAQ HAV 108.2 109.5
CAS CAQ HAW 108.2 109.5
CAQ CAS HAZ 109.0 109.5
CAQ CAS HA0 109.0 109.5
CAS CAW CAV 125.5 117.8
CAS CAW OAT 125.8 117.8
CAW CAS HAZ 109.1 109.5
CAW CAS HA0 109.0 109.4
CAS CAW HA2 111.8 115.7
CAF CAH CAM 124.1 120.0
CAH CAF HAF 117.9 120.0
CAF CAH HAH 118.0 119.9
CAF CAD HAD 121.1 120.0
CAD CAE HAE 120.3 119.9
CAE CAD HAD 121.0 120.0
CAE CAG HAG 119.2 120.0
CAG CAK HAK 120.9 120.0
CAK CAG HAG 119.2 120.0
CAK CAV HA1 116.3 115.7
OAT CAW CAV 58.0 57.6
CAW CAV OAT 60.8 57.6
CAV CAW HA2 112.8 117.8
CAW CAV HA1 117.4 117.8
OAT CAW HA2 112.9 117.8
CAH CAM CAI 108.7 109.5
CAM CAH HAH 118.0 120.0
CAH CAM HAN 109.6 109.5
CAH CAM HAO 109.7 109.5
CAM CAI CAJ 114.8 120.0
CAI CAM HAN 109.6 109.5
CAI CAM HAO 109.6 109.5
CAM CAI HAI 122.6 120.0
CAJ CAI HAI 122.6 120.0
CAI CAJ HAJ 122.8 120.0
CAN CAJ HAJ 122.8 120.0
CAP CAN HAP 108.8 109.4
CAP CAN HAQ 108.8 109.4
CAN CAP HAT 110.6 109.5
CAN CAP HAU 110.6 109.5
CAO CAP HAT 110.6 109.5
CAO CAP HAU 110.6 109.5
CAO CAL CAA 110.0 109.5
CAL CAO HAS 109.0 109.4
CAL CAO HAR 109.0 109.5
CAO CAL HAM 109.3 109.5
CAO CAL HAL 109.4 109.5
CAA CAL HAM 109.4 109.5
CAA CAL HAL 109.3 109.5
CAL CAA HAC 109.5 109.5
CAL CAA HAB 109.5 109.5
CAL CAA HAA 109.5 109.5
HAY CAR HAX 109.5 109.5
HAV CAQ HAW 109.5 109.4
HAZ CAS HA0 109.4 109.4
HAN CAM HAO 109.5 109.5
HAP CAN HAQ 109.5 109.5
HAT CAP HAU 109.4 109.5
HAS CAO HAR 109.5 109.5
HAM CAL HAL 109.4 109.5
HAC CAA HAB 109.5 109.5
HAC CAA HAA 109.5 109.4
HAB CAA HAA 109.4 109.5

Torsion Angles for DJ3

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
OAC CAU OAB CAR 174.5 180.4
OAB CAU OAC H1 0.0 360.0
OAB CAU CAR CAQ 103.5 0.1
OAB CAU CAR HAY 224.0 120.0
OAB CAU CAR HAX 343.0 240.0
OAB CAU OAC CAR 185.2 179.6
OAC CAU CAR CAQ 288.8 179.7
OAC CAU CAR HAY 49.3 299.7
OAC CAU CAR HAX 168.3 59.6
OAB CAU CAR OAC 174.7 180.4
CAR CAU OAC H1 174.9 180.4
CAU CAR CAQ CAS 132.8 180.0
CAQ CAR CAU HAY 239.5 240.0
CAQ CAR CAU HAX 120.5 120.0
CAU CAR CAQ HAV 253.6 300.0
CAU CAR CAQ HAW 12.1 59.9
HAY CAR CAU HAX 241.0 240.0
CAU CAR CAQ HAY 120.5 119.9
CAU CAR CAQ HAX 239.5 240.0
CAR CAQ CAS CAW 96.5 180.0
CAS CAQ CAR HAV 239.2 240.0
CAS CAQ CAR HAW 120.7 120.0
CAR CAQ CAS HAZ 216.8 300.0
CAR CAQ CAS HA0 336.2 60.0
HAY CAR CAQ HAX 119.0 120.1
HAV CAQ CAR HAW 241.5 240.1
CAS CAQ CAR HAY 12.3 60.0
CAS CAQ CAR HAX 253.3 300.0
CAR CAQ CAS HAV 120.7 120.0
CAR CAQ CAS HAW 239.3 240.0
CAQ CAS CAW CAV 109.3 175.0
CAQ CAS CAW OAT 182.6 241.0
CAW CAS CAQ HAZ 239.7 240.0
CAW CAS CAQ HA0 120.3 120.0
CAQ CAS CAW HA2 326.2 28.1
HAV CAQ CAS HAW 118.5 120.0
HAZ CAS CAQ HA0 240.6 240.0
CAW CAS CAQ HAV 335.8 60.0
CAW CAS CAQ HAW 217.3 300.0
CAQ CAS CAW HAZ 120.3 120.1
CAQ CAS CAW HA0 239.7 240.0
OAT CAW CAS CAV 73.3 66.0
CAS CAW CAV OAT 113.7 106.9
CAV CAW CAS HA2 143.1 146.9
CAS CAW CAV HA1 4.7 0.0
OAT CAW CAS HA2 216.4 213.0
HAZ CAS CAW HA0 119.5 119.9
CAH CAF CAD HAD 2.1 355.6
CAF CAH CAM CAI 297.3 125.3
CAM CAH CAF HAH 180.0 180.0
CAF CAH CAM HAN 57.2 245.3
CAF CAH CAM HAO 177.4 5.3
CAF CAD CAE HAE 359.5 360.0
CAE CAD CAF HAD 180.0 180.0
CAF CAD CAE HAD 180.0 180.0
CAD CAE CAG HAG 358.6 360.0
CAE CAG CAK HAK 353.9 359.9
CAK CAG CAE HAG 180.0 180.1
CAE CAG CAK HAG 180.0 179.9
CAG CAK CAV HA1 167.5 333.0
CAK CAV CAW HA2 17.6 359.9
CAW CAV CAK HA1 130.5 147.0
CAV CAW CAS HAZ 349.1 55.0
CAV CAW CAS HA0 229.6 295.0
CAS CAW CAV HA2 217.2 213.8
CAK CAV CAW HA1 230.1 213.7
OAT CAW CAV HA2 103.6 106.9
CAS CAW OAT CAV 246.8 253.2
OAT CAW CAS HAZ 62.3 121.0
OAT CAW CAS HA0 302.9 1.1
CAS CAW OAT HA2 143.3 146.3
OAT CAW CAV OAT -0.0 -0.0
CAV CAW OAT HA2 256.5 253.2
OAT CAW CAV HA1 251.1 253.1
CAM CAH CAF HAF 174.9 186.6
CAF CAH CAM HAH 180.0 180.0
CAH CAM CAI CAJ 197.6 127.6
CAI CAM CAH HAN 240.1 240.0
CAI CAM CAH HAO 119.9 120.0
CAH CAM CAI HAI 17.6 307.6
HAN CAM CAH HAO 239.7 240.0
OAT CAV CAW HA2 256.4 253.1
CAW CAV OAT HA1 252.7 253.2
CAV OAT CAW HA2 103.5 106.8
CAI CAM CAH HAH 117.4 305.3
CAH CAM CAI HAN 119.9 120.0
CAH CAM CAI HAO 240.1 240.0
CAJ CAI CAM HAI 180.0 180.0
CAM CAI CAJ HAJ 183.2 186.9
HAN CAM CAI HAO 120.3 120.0
CAJ CAI CAM HAN 77.7 7.6
CAJ CAI CAM HAO 317.5 247.6
CAM CAI CAJ HAI 180.0 180.0
CAN CAJ CAI HAJ 180.0 180.0
CAN CAJ CAI HAI 183.2 186.9
CAI CAJ CAN HAJ 180.0 180.0
CAP CAN CAJ HAJ 11.7 306.5
CAO CAP CAN HAT 240.7 240.0
CAO CAP CAN HAU 119.3 120.0
HAP CAN CAP HAQ 119.2 120.0
HAT CAP CAN HAU 238.6 240.0
CAO CAP CAN HAP 50.7 60.0
CAO CAP CAN HAQ 291.5 300.0
CAN CAP CAO HAT 119.3 120.0
CAN CAP CAO HAU 240.7 240.0
HAT CAP CAO HAU 121.4 120.0
CAL CAO CAP HAT 109.6 60.0
CAL CAO CAP HAU 348.3 300.0
CAA CAL CAO HAM 239.9 240.0
CAA CAL CAO HAL 120.1 120.0
CAO CAL CAA HAC 180.0 59.9
CAO CAL CAA HAB 300.0 180.0
CAO CAL CAA HAA 60.0 300.0
HAS CAO CAL HAR 119.4 120.1
HAM CAL CAO HAL 240.2 240.0
CAA CAL CAO HAS 181.8 60.1
CAA CAL CAO HAR 62.3 300.0
CAO CAL CAA HAM 120.1 120.0
CAO CAL CAA HAL 239.9 240.0
HAM CAL CAA HAL 119.8 120.0
HAC CAA CAL HAB 240.0 239.9
HAC CAA CAL HAA 120.0 119.9
HAB CAA CAL HAA 240.0 240.0
H1 OAC CAU CAR 174.9 180.4
CAU CAR HAY CAQ 236.8 240.0
CAU CAR HAY HAX 118.4 120.0
HAY CAR CAQ CAS 12.3 60.0
CAQ CAR HAY HAX 241.6 239.9
HAY CAR CAQ HAV 133.1 180.1
HAY CAR CAQ HAW 251.5 300.0
CAU CAR HAX CAQ 123.2 120.0
CAU CAR HAX HAY 241.6 240.1
HAX CAR CAQ CAS 253.3 300.0
CAQ CAR HAX HAY 118.4 120.0
HAX CAR CAQ HAV 14.1 60.0
HAX CAR CAQ HAW 132.6 179.9
CAR CAQ HAV CAS 235.4 240.0
HAV CAQ CAR HAY 133.1 180.1
HAV CAQ CAR HAX 14.1 60.0
CAR CAQ HAV HAW 117.7 119.9
HAV CAQ CAS CAW 335.8 60.0
CAS CAQ HAV HAW 242.3 240.0
HAV CAQ CAS HAZ 96.1 180.0
HAV CAQ CAS HA0 215.5 300.0
CAR CAQ HAW CAS 124.6 120.0
HAW CAQ CAR HAY 251.5 300.0
HAW CAQ CAR HAX 132.6 179.9
CAR CAQ HAW HAV 242.3 240.0
HAW CAQ CAS CAW 217.3 300.0
CAS CAQ HAW HAV 117.7 120.0
HAW CAQ CAS HAZ 337.5 60.0
HAW CAQ CAS HA0 97.0 180.0
CAQ CAS HAZ CAW 238.4 239.9
HAZ CAS CAQ HAV 96.1 180.0
HAZ CAS CAQ HAW 337.5 60.0
CAQ CAS HAZ HA0 119.2 120.0
HAZ CAS CAW CAV 349.1 55.0
HAZ CAS CAW OAT 62.3 121.0
CAW CAS HAZ HA0 240.8 240.1
HAZ CAS CAW HA2 206.0 268.0
CAQ CAS HA0 CAW 121.6 120.0
HA0 CAS CAQ HAV 215.5 300.0
HA0 CAS CAQ HAW 97.0 180.0
CAQ CAS HA0 HAZ 240.8 240.0
HA0 CAS CAW CAV 229.6 295.0
HA0 CAS CAW OAT 302.9 1.1
CAW CAS HA0 HAZ 119.2 119.9
HA0 CAS CAW HA2 86.5 148.1
CAS CAW HA2 CAV 148.0 146.9
CAS CAW HA2 OAT 211.5 213.0
HA2 CAW CAS HAZ 206.0 268.0
HA2 CAW CAS HA0 86.5 148.1
OAT CAW HA2 CAV 296.5 294.0
HA2 CAW CAV OAT 256.4 253.1
HA2 CAW CAV HA1 147.5 146.2
CAW CAV HA1 OAT 69.9 66.0
HA1 CAV CAW HA2 147.5 146.2
HAK CAK CAG HAG 173.9 180.0
HAK CAK CAV HA1 347.5 153.0
HAG CAG CAK HAK 173.9 180.0
HAE CAE CAD HAD 179.5 180.0
HAE CAE CAG HAG 178.6 180.0
HAD CAD CAE HAE 179.5 180.0
HAF CAF CAH CAM 174.9 186.6
HAF CAF CAH HAH 354.9 6.7
HAF CAF CAD HAD 182.1 175.6
CAF CAH HAH CAM 180.0 180.0
HAH CAH CAF HAF 354.9 6.7
HAH CAH CAM CAI 117.4 305.3
HAH CAH CAM HAN 237.2 65.3
HAH CAH CAM HAO 357.5 185.3
CAH CAM HAN CAI 240.7 240.0
HAN CAM CAH HAH 237.2 65.3
CAH CAM HAN HAO 120.4 120.0
HAN CAM CAI CAJ 77.7 7.6
CAI CAM HAN HAO 239.7 240.0
HAN CAM CAI HAI 257.7 187.6
CAH CAM HAO CAI 119.3 120.0
HAO CAM CAH HAH 357.5 185.3
CAH CAM HAO HAN 239.6 240.0
HAO CAM CAI CAJ 317.5 247.6
CAI CAM HAO HAN 120.3 120.0
HAO CAM CAI HAI 137.5 67.6
CAM CAI HAI CAJ 180.0 180.0
HAI CAI CAM HAN 257.7 187.6
HAI CAI CAM HAO 137.5 67.6
HAI CAI CAJ HAJ 3.2 6.9
HAJ CAJ CAI HAI 3.2 6.9
HAP CAN CAJ HAJ 132.1 66.5
CAP CAN HAP HAQ 241.2 240.1
HAP CAN CAP HAT 170.0 180.0
HAP CAN CAP HAU 291.4 300.0
HAQ CAN CAJ HAJ 251.3 186.6
CAP CAN HAQ HAP 118.8 119.9
HAQ CAN CAP HAT 50.8 60.0
HAQ CAN CAP HAU 172.1 180.0
HAT CAP CAN HAP 170.0 180.0
HAT CAP CAN HAQ 50.8 60.0
CAN CAP HAT HAU 122.0 120.0
CAO CAP HAT HAU 238.0 239.9
HAU CAP CAN HAP 291.4 300.0
HAU CAP CAN HAQ 172.1 180.0
CAN CAP HAU HAT 238.0 240.0
CAO CAP HAU HAT 122.0 120.0
HAS CAO CAP HAT 229.9 180.0
HAS CAO CAP HAU 108.5 59.9
HAS CAO CAL CAA 181.8 60.1
CAL CAO HAS HAR 240.9 240.0
HAS CAO CAL HAM 301.9 180.1
HAS CAO CAL HAL 61.7 300.1
HAR CAO CAP HAT 349.3 300.0
HAR CAO CAP HAU 228.0 180.0
HAR CAO CAL CAA 62.3 300.0
CAL CAO HAR HAS 119.1 120.0
HAR CAO CAL HAM 182.4 60.0
HAR CAO CAL HAL 302.2 180.0
CAO CAL HAM CAA 239.5 240.0
HAM CAL CAO HAS 301.9 180.1
HAM CAL CAO HAR 182.4 60.0
CAO CAL HAM HAL 119.8 120.0
CAA CAL HAM HAL 240.3 240.0
HAM CAL CAA HAC 59.9 299.9
HAM CAL CAA HAB 179.9 60.0
HAM CAL CAA HAA 299.9 180.0
CAO CAL HAL CAA 120.5 120.0
HAL CAL CAO HAS 61.7 300.1
HAL CAL CAO HAR 302.2 180.0
CAO CAL HAL HAM 240.2 240.0
CAA CAL HAL HAM 119.7 120.0
HAL CAL CAA HAC 300.1 179.9
HAL CAL CAA HAB 60.1 300.0
HAL CAL CAA HAA 180.1 60.0
HAC CAA CAL HAM 59.9 299.9
HAC CAA CAL HAL 300.1 179.9
CAL CAA HAC HAB 120.0 120.0
CAL CAA HAC HAA 240.0 240.0
HAB CAA HAC HAA 120.0 120.0
HAB CAA CAL HAM 179.9 60.0
HAB CAA CAL HAL 60.1 300.0
CAL CAA HAB HAC 240.0 239.9
CAL CAA HAB HAA 120.0 120.0
HAC CAA HAB HAA 240.0 240.1
HAA CAA CAL HAM 299.9 180.0
HAA CAA CAL HAL 180.1 60.0
CAL CAA HAA HAC 120.0 120.0
CAL CAA HAA HAB 240.0 240.0
HAC CAA HAA HAB 120.0 120.0