PDB Chemical Component DIV
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for DIV
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N |
CA |
1.466 |
1.470 |
| N |
H |
1.000 |
1.009 |
| N |
H2 |
1.000 |
1.009 |
| CA |
CB1 |
1.524 |
1.530 |
| CA |
CB2 |
1.574 |
1.530 |
| CA |
C |
1.506 |
1.507 |
| CB1 |
CG1 |
1.519 |
1.530 |
| CB1 |
HB11 |
1.100 |
1.091 |
| CB1 |
HB12 |
1.100 |
1.089 |
| CG1 |
HG11 |
1.100 |
1.089 |
| CG1 |
HG12 |
1.100 |
1.091 |
| CG1 |
HG13 |
1.100 |
1.090 |
| CB2 |
HB21 |
1.100 |
1.090 |
| CB2 |
HB22 |
1.100 |
1.090 |
| CB2 |
HB23 |
1.100 |
1.091 |
| C |
O |
1.248 |
1.208 |
| C |
OXT |
|
1.342 |
| OXT |
HXT |
|
0.967 |
Bond Angles for DIV
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CA |
N |
H |
109.5 |
106.7 |
| CA |
N |
H2 |
109.5 |
106.7 |
| N |
CA |
CB1 |
110.3 |
109.5 |
| N |
CA |
CB2 |
106.7 |
109.4 |
| N |
CA |
C |
115.7 |
109.5 |
| H |
N |
H2 |
109.5 |
106.7 |
| CB1 |
CA |
CB2 |
110.2 |
109.5 |
| CB1 |
CA |
C |
106.9 |
109.5 |
| CA |
CB1 |
CG1 |
114.2 |
109.5 |
| CA |
CB1 |
HB11 |
107.9 |
109.4 |
| CA |
CB1 |
HB12 |
106.8 |
109.5 |
| CB2 |
CA |
C |
107.0 |
109.5 |
| CA |
CB2 |
HB21 |
109.5 |
109.5 |
| CA |
CB2 |
HB22 |
109.5 |
109.5 |
| CA |
CB2 |
HB23 |
109.5 |
109.4 |
| CA |
C |
O |
119.3 |
120.0 |
| CA |
C |
OXT |
|
120.0 |
| CG1 |
CB1 |
HB11 |
107.9 |
109.4 |
| CG1 |
CB1 |
HB12 |
106.8 |
109.6 |
| CB1 |
CG1 |
HG11 |
109.5 |
109.5 |
| CB1 |
CG1 |
HG12 |
109.4 |
109.4 |
| CB1 |
CG1 |
HG13 |
109.5 |
109.5 |
| HB11 |
CB1 |
HB12 |
113.3 |
109.5 |
| HG11 |
CG1 |
HG12 |
109.5 |
109.5 |
| HG11 |
CG1 |
HG13 |
109.4 |
109.5 |
| HG12 |
CG1 |
HG13 |
109.5 |
109.4 |
| HB21 |
CB2 |
HB22 |
109.5 |
109.5 |
| HB21 |
CB2 |
HB23 |
109.4 |
109.5 |
| HB22 |
CB2 |
HB23 |
109.5 |
109.4 |
| O |
C |
OXT |
|
120.0 |
| C |
OXT |
HXT |
|
120.0 |
Torsion Angles for DIV
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| H |
N |
CA |
H2 |
240.0 |
246.2 |
| CB1 |
CA |
N |
CB2 |
240.4 |
240.0 |
| CB1 |
CA |
N |
C |
121.5 |
120.0 |
| N |
CA |
CB1 |
CG1 |
58.3 |
59.9 |
| N |
CA |
CB1 |
HB11 |
178.3 |
300.0 |
| N |
CA |
CB1 |
HB12 |
300.4 |
180.0 |
| CB2 |
CA |
N |
C |
241.1 |
240.0 |
| N |
CA |
CB2 |
HB21 |
274.0 |
300.0 |
| N |
CA |
CB2 |
HB22 |
34.0 |
60.1 |
| N |
CA |
CB2 |
HB23 |
154.0 |
180.0 |
| N |
CA |
C |
O |
147.0 |
145.0 |
| N |
CA |
C |
OXT |
|
325.0 |
| CA |
N |
H |
H2 |
120.0 |
113.8 |
| H |
N |
CA |
CB1 |
34.6 |
306.3 |
| H |
N |
CA |
CB2 |
154.2 |
66.2 |
| H |
N |
CA |
C |
273.1 |
186.2 |
| CA |
N |
H2 |
H |
240.0 |
246.2 |
| H2 |
N |
CA |
CB1 |
154.6 |
60.1 |
| H2 |
N |
CA |
CB2 |
274.2 |
180.0 |
| H2 |
N |
CA |
C |
33.1 |
300.0 |
| CB1 |
CA |
N |
H |
34.6 |
306.3 |
| CB1 |
CA |
N |
H2 |
154.6 |
60.1 |
| N |
CA |
CB1 |
CB2 |
117.5 |
119.9 |
| N |
CA |
CB1 |
C |
233.4 |
240.0 |
| CB2 |
CA |
CB1 |
C |
116.0 |
120.0 |
| CB1 |
CA |
CB2 |
HB21 |
33.6 |
60.0 |
| CB1 |
CA |
CB2 |
HB22 |
153.6 |
180.0 |
| CB1 |
CA |
CB2 |
HB23 |
273.7 |
299.9 |
| CB1 |
CA |
C |
O |
23.7 |
25.0 |
| CB1 |
CA |
C |
OXT |
|
205.0 |
| CG1 |
CB1 |
CA |
HB11 |
240.0 |
120.0 |
| CG1 |
CB1 |
CA |
HB12 |
117.9 |
239.9 |
| CA |
CB1 |
CG1 |
HG11 |
244.3 |
300.0 |
| CA |
CB1 |
CG1 |
HG12 |
4.3 |
60.1 |
| CA |
CB1 |
CG1 |
HG13 |
124.4 |
180.0 |
| HB11 |
CB1 |
CA |
HB12 |
237.9 |
120.0 |
| CB2 |
CA |
N |
H |
154.2 |
66.2 |
| CB2 |
CA |
N |
H2 |
274.2 |
180.0 |
| N |
CA |
CB2 |
CB1 |
240.3 |
240.0 |
| N |
CA |
CB2 |
C |
124.4 |
120.0 |
| CB1 |
CA |
CB2 |
C |
244.1 |
240.0 |
| CB2 |
CA |
CB1 |
CG1 |
300.8 |
300.0 |
| CB2 |
CA |
CB1 |
HB11 |
60.8 |
180.0 |
| CB2 |
CA |
CB1 |
HB12 |
183.0 |
60.1 |
| CB2 |
CA |
C |
O |
265.7 |
265.0 |
| CB2 |
CA |
C |
OXT |
|
85.0 |
| HB21 |
CB2 |
CA |
HB22 |
240.0 |
239.9 |
| HB21 |
CB2 |
CA |
HB23 |
120.0 |
120.0 |
| HB22 |
CB2 |
CA |
HB23 |
240.0 |
240.1 |
| C |
CA |
N |
H |
273.1 |
186.2 |
| C |
CA |
N |
H2 |
33.1 |
300.0 |
| N |
CA |
C |
CB1 |
123.2 |
120.0 |
| N |
CA |
C |
CB2 |
241.3 |
240.0 |
| CB1 |
CA |
C |
CB2 |
118.0 |
120.0 |
| C |
CA |
CB1 |
CG1 |
184.9 |
180.0 |
| C |
CA |
CB1 |
HB11 |
304.9 |
60.0 |
| C |
CA |
CB1 |
HB12 |
67.0 |
300.1 |
| C |
CA |
CB2 |
HB21 |
149.5 |
180.0 |
| C |
CA |
CB2 |
HB22 |
269.5 |
300.1 |
| C |
CA |
CB2 |
HB23 |
29.6 |
60.0 |
| O |
C |
CA |
OXT |
|
180.0 |
| CA |
C |
OXT |
HXT |
|
180.0 |
| CG1 |
CB1 |
CA |
CB2 |
300.8 |
300.0 |
| CG1 |
CB1 |
CA |
C |
184.9 |
180.0 |
| CA |
CB1 |
CG1 |
HB11 |
120.0 |
240.1 |
| CA |
CB1 |
CG1 |
HB12 |
242.1 |
120.0 |
| HB11 |
CB1 |
CG1 |
HB12 |
122.1 |
240.0 |
| HG11 |
CG1 |
CB1 |
HG12 |
240.0 |
240.0 |
| HG11 |
CG1 |
CB1 |
HG13 |
119.9 |
120.1 |
| HG12 |
CG1 |
CB1 |
HG13 |
239.9 |
240.1 |
| HB11 |
CB1 |
CA |
CB2 |
60.8 |
180.0 |
| HB11 |
CB1 |
CA |
C |
304.9 |
60.0 |
| CA |
CB1 |
HB11 |
CG1 |
236.1 |
120.0 |
| CA |
CB1 |
HB11 |
HB12 |
118.1 |
240.1 |
| CG1 |
CB1 |
HB11 |
HB12 |
242.0 |
120.1 |
| HB11 |
CB1 |
CG1 |
HG11 |
124.3 |
60.0 |
| HB11 |
CB1 |
CG1 |
HG12 |
244.3 |
180.0 |
| HB11 |
CB1 |
CG1 |
HG13 |
4.4 |
299.9 |
| HB12 |
CB1 |
CA |
CB2 |
183.0 |
60.1 |
| HB12 |
CB1 |
CA |
C |
67.0 |
300.1 |
| CA |
CB1 |
HB12 |
CG1 |
122.6 |
240.0 |
| CA |
CB1 |
HB12 |
HB11 |
241.3 |
119.9 |
| CG1 |
CB1 |
HB12 |
HB11 |
118.7 |
240.0 |
| HB12 |
CB1 |
CG1 |
HG11 |
2.2 |
180.0 |
| HB12 |
CB1 |
CG1 |
HG12 |
122.2 |
300.0 |
| HB12 |
CB1 |
CG1 |
HG13 |
242.3 |
59.9 |
| HG11 |
CG1 |
CB1 |
HB11 |
124.3 |
60.0 |
| HG11 |
CG1 |
CB1 |
HB12 |
2.2 |
180.0 |
| CB1 |
CG1 |
HG11 |
HG12 |
120.0 |
120.0 |
| CB1 |
CG1 |
HG11 |
HG13 |
240.0 |
240.0 |
| HG12 |
CG1 |
HG11 |
HG13 |
120.1 |
120.0 |
| HG12 |
CG1 |
CB1 |
HB11 |
244.3 |
180.0 |
| HG12 |
CG1 |
CB1 |
HB12 |
122.2 |
300.0 |
| CB1 |
CG1 |
HG12 |
HG11 |
240.0 |
240.0 |
| CB1 |
CG1 |
HG12 |
HG13 |
120.0 |
119.9 |
| HG11 |
CG1 |
HG12 |
HG13 |
240.0 |
240.0 |
| HG13 |
CG1 |
CB1 |
HB11 |
4.4 |
299.9 |
| HG13 |
CG1 |
CB1 |
HB12 |
242.3 |
59.9 |
| CB1 |
CG1 |
HG13 |
HG11 |
120.0 |
120.1 |
| CB1 |
CG1 |
HG13 |
HG12 |
240.0 |
240.1 |
| HG11 |
CG1 |
HG13 |
HG12 |
120.0 |
120.0 |
| HB21 |
CB2 |
CA |
C |
149.5 |
180.0 |
| CA |
CB2 |
HB21 |
HB22 |
120.0 |
120.1 |
| CA |
CB2 |
HB21 |
HB23 |
240.0 |
240.0 |
| HB22 |
CB2 |
HB21 |
HB23 |
120.0 |
120.0 |
| HB22 |
CB2 |
CA |
C |
269.5 |
300.1 |
| CA |
CB2 |
HB22 |
HB21 |
240.0 |
239.9 |
| CA |
CB2 |
HB22 |
HB23 |
120.0 |
119.9 |
| HB21 |
CB2 |
HB22 |
HB23 |
240.0 |
240.0 |
| HB23 |
CB2 |
CA |
C |
29.6 |
60.0 |
| CA |
CB2 |
HB23 |
HB21 |
120.0 |
120.0 |
| CA |
CB2 |
HB23 |
HB22 |
240.0 |
240.0 |
| HB21 |
CB2 |
HB23 |
HB22 |
120.0 |
120.0 |
| CA |
C |
O |
OXT |
|
180.0 |
| O |
C |
OXT |
HXT |
|
0.0 |
| CA |
C |
OXT |
O |
|
180.0 |