PDB Chemical Component DIH

Ideal Model

Chemical Description

Name 7-[[(3R,4R)-3-(hydroxymethyl)-4-oxidanyl-pyrrolidin-1-ium-1-yl]methyl]-3,5-dihydropyrrolo[3,2-d]pyrimidin-4-one
Formula C12 H17 N4 O3
Formal charge 1
Molecular weight 265.288 g/mol
Component type NON-POLYMER

Chemical features

Atom count 36
Chiral atom count 2
Chiral atoms C4' C3'
Bond count 38
Aromatic bond count 5

Chemical Identifiers

Systematic name (OpenEye OEToolkits) 7-[[(3~{R},4~{R})-3-(hydroxymethyl)-4-oxidanyl-pyrrolidin-1-ium-1-yl]methyl]-3,5-dihydropyrrolo[3,2-d]pyrimidin-4-one

Chemical Descriptors

Stereo SMILES (CACTVS) OC[C@H]1C[NH+](C[C@@H]1O)Cc2c[nH]c3C(=O)NC=Nc23
SMILES (CACTVS) OC[CH]1C[NH+](C[CH]1O)Cc2c[nH]c3C(=O)NC=Nc23
Stereo SMILES (OpenEye) c1c(c2c([nH]1)C(=O)NC=N2)C[NH+]3C[C@@H]([C@H](C3)O)CO
InChI descriptor InChI=1S/C12H16N4O3/c17-5-8-3-16(4-9(8)18)2-7-1-13-11-10(7)14-6-15-12(11)19/h1,6,8-9,13,17-18H,2-5H2,(H,14,15,19)/p+1/t8-,9+/m1/s1
InChIKey descriptor AFNHHLILYQEHKK-BDAKNGLRSA-O

Status Information

Last modified 2018-12-05
Created 2002-11-05
Release status REL
Model PDB code 1N3I
Processing site PDBJ