PDB Chemical Component DHK

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for DHK

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C2	C3	1.405	1.302
C2	C1	1.408	1.500
C2	H2	1.103	1.079
C3	O3	1.330	1.356
C3	C4	1.417	1.502
O3	H3	0.950	0.966
C4	O4	1.326	1.430
C4	C5	1.435	1.529
C4	H4	1.115	1.090
O4	HA	0.950	0.966
C5	C6	1.428	1.532
C5	O5	1.392	1.429
C5	H5	1.115	1.091
C1	C6	1.397	1.530
C1	C	1.413	1.507
C1	H1	1.115	1.090
C6	H6C1	1.115	1.090
C6	H6C2	1.115	1.089
C	O1	1.309	1.208
C	O2	1.331	1.341
O2	HC	0.950	0.967
O5	HB	0.950	0.967

Bond Angles for DHK

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C3	C2	C1	115.9	124.0
C3	C2	H2	122.1	118.0
C2	C3	O3	112.5	118.0
C2	C3	C4	125.0	124.0
C1	C2	H2	122.1	118.0
C2	C1	C6	116.2	110.2
C2	C1	C	113.6	109.2
C2	C1	H1	98.7	109.3
O3	C3	C4	120.9	118.0
C3	O3	H3	112.4	106.8
C3	C4	O4	107.8	109.3
C3	C4	C5	112.6	110.1
C3	C4	H4	108.7	109.3
O4	C4	C5	110.3	109.7
O4	C4	H4	108.6	109.3
C4	O4	HA	107.8	106.9
C5	C4	H4	108.7	109.1
C4	C5	C6	109.0	108.7
C4	C5	O5	104.4	109.7
C4	C5	H5	111.4	109.6
C6	C5	O5	108.9	109.6
C6	C5	H5	111.4	109.6
C5	C6	C1	119.5	108.5
C5	C6	H6C1	108.6	109.6
C5	C6	H6C2	108.6	109.7
O5	C5	H5	111.4	109.6
C5	O5	HB	108.9	106.8
C6	C1	C	123.5	109.4
C6	C1	H1	98.7	109.4
C1	C6	H6C1	108.6	109.6
C1	C6	H6C2	108.6	109.7
C	C1	H1	98.7	109.4
C1	C	O1	115.7	119.9
C1	C	O2	117.4	120.0
H6C1	C6	H6C2	101.4	109.8
O1	C	O2	125.9	120.1
C	O2	HC	117.4	120.0

Torsion Angles for DHK

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C1	C2	C3	H2	180.0	179.9
C3	C2	C1	C6	350.1	342.9
C3	C2	C1	C	197.8	222.7
C3	C2	C1	H1	94.3	103.1
O3	C3	C2	C4	194.3	180.2
C2	C3	O3	H3	180.0	0.0
C2	C3	C4	O4	213.4	222.8
C2	C3	C4	C5	335.3	343.3
C2	C3	C4	H4	95.8	103.1
C3	C2	C1	H2	180.0	180.1
C1	C2	C3	O3	200.1	180.5
C1	C2	C3	C4	5.8	0.2
C5	C6	C1	C2	36.1	49.5
C6	C1	C2	C	152.3	120.2
C6	C1	C2	H1	255.8	239.8
C2	C1	C6	H6C1	270.8	289.8
C2	C1	C6	H6C2	161.4	169.3
C	C1	C2	H1	103.5	119.6
C2	C1	C	O1	120.1	120.7
C2	C1	C	O2	310.5	300.6
C3	C2	H2	C1	180.0	180.0
H2	C2	C3	O3	20.1	0.5
H2	C2	C3	C4	185.8	180.3
H2	C2	C1	C6	170.1	162.8
H2	C2	C1	C	17.8	42.7
H2	C2	C1	H1	274.3	283.0
O3	C3	C2	C1	200.1	180.5
O3	C3	C2	H2	20.1	0.5
C2	C3	O3	C4	166.3	179.8
O3	C3	C4	O4	17.9	42.5
O3	C3	C4	C5	139.8	163.0
O3	C3	C4	H4	260.3	282.9
C4	C3	C2	C1	5.8	0.2
C4	C3	C2	H2	185.8	180.3
C2	C3	C4	O3	195.5	180.2
C4	C3	O3	H3	13.7	180.3
O4	C4	C3	C5	238.0	239.5
O4	C4	C3	H4	117.6	119.6
C3	C4	O4	HA	180.0	300.0
C5	C4	C3	H4	239.5	240.2
C3	C4	C5	C6	44.8	49.2
C3	C4	C5	O5	161.0	169.1
C3	C4	C5	H5	281.4	289.4
H3	O3	C3	C4	13.7	180.3
C3	C4	O4	C5	123.4	120.8
C3	C4	O4	H4	242.4	240.3
C5	C4	O4	H4	119.0	119.6
O4	C4	C5	C6	165.3	169.5
O4	C4	C5	O5	281.5	289.4
O4	C4	C5	H5	41.9	49.7
C3	C4	C5	O4	239.5	239.7
C3	C4	C5	H4	120.5	120.0
O4	C4	C5	H4	241.0	240.3
C5	C4	O4	HA	56.6	179.2
C6	C5	C4	O5	243.8	240.1
C6	C5	C4	H5	123.4	119.8
C4	C5	C6	C1	306.0	292.5
C4	C5	C6	H6C1	71.3	52.1
C4	C5	C6	H6C2	180.8	172.7
O5	C5	C4	H5	239.6	239.7
C4	C5	O5	HB	63.7	60.3
C3	C4	H4	O4	117.0	119.6
C3	C4	H4	C5	237.1	239.5
O4	C4	H4	C5	120.1	119.9
H4	C4	O4	HA	297.6	59.7
H4	C4	C5	C6	284.3	289.2
H4	C4	C5	O5	40.5	49.1
H4	C4	C5	H5	160.9	169.4
HA	O4	C4	C5	56.6	179.2
HA	O4	C4	H4	297.6	59.7
C2	C1	C6	C5	36.1	49.5
C6	C5	C4	H4	284.3	289.2
C4	C5	C6	O5	113.3	119.9
C4	C5	C6	H5	236.6	240.2
O5	C5	C6	H5	123.3	120.3
C6	C5	O5	HB	180.0	179.6
C5	C6	C1	C	185.3	169.5
C5	C6	C1	H1	291.8	289.3
C1	C6	C5	H6C1	234.7	240.4
C1	C6	C5	H6C2	125.3	119.8
H6C1	C6	C5	H6C2	250.6	239.4
O5	C5	C4	H4	40.5	49.1
C4	C5	O5	C6	243.7	240.7
C4	C5	O5	H5	120.4	120.4
C6	C5	O5	H5	236.7	239.7
O5	C5	C6	C1	192.7	172.6
O5	C5	C6	H6C1	318.0	292.2
O5	C5	C6	H6C2	67.4	52.9
H5	C5	C4	H4	160.9	169.4
C4	C5	H5	C6	122.0	119.3
C4	C5	H5	O5	243.8	239.6
C6	C5	H5	O5	121.8	120.4
H5	C5	C6	C1	69.4	52.3
H5	C5	C6	H6C1	194.7	171.9
H5	C5	C6	H6C2	304.1	292.6
H5	C5	O5	HB	303.3	299.9
C6	C1	C2	H2	170.1	162.8
C2	C1	C6	C	210.7	239.9
C2	C1	C6	H1	104.3	120.2
C1	C6	C5	O5	192.7	172.6
C1	C6	C5	H5	69.4	52.3
C5	C6	C1	H6C1	125.3	119.6
C5	C6	C1	H6C2	234.7	240.2
C	C1	C6	H1	253.5	240.3
C6	C1	C	O1	330.1	0.1
C6	C1	C	O2	160.5	179.9
H6C1	C6	C1	H6C2	109.4	120.6
C	C1	C2	H2	17.8	42.7
C2	C1	C	C6	150.0	120.6
C2	C1	C	H1	256.5	240.4
C6	C1	C	H1	106.5	119.7
C	C1	C6	H6C1	60.0	49.9
C	C1	C6	H6C2	310.6	289.3
O1	C	C1	O2	169.6	180.1
C1	C	O2	HC	180.0	180.1
H1	C1	C2	H2	274.3	283.0
C2	C1	H1	C6	241.6	239.3
C2	C1	H1	C	115.6	119.6
C6	C1	H1	C	234.0	240.2
H1	C1	C6	H6C1	166.5	169.7
H1	C1	C6	H6C2	57.1	49.1
H1	C1	C	O1	223.6	240.3
H1	C1	C	O2	54.0	60.2
H6C1	C6	C5	O5	318.0	292.2
H6C1	C6	C5	H5	194.7	171.9
C5	C6	H6C1	C1	228.5	241.1
C5	C6	H6C1	H6C2	114.3	120.6
H6C1	C6	C1	C	60.0	49.9
H6C1	C6	C1	H1	166.5	169.7
C1	C6	H6C1	H6C2	245.7	239.5
H6C2	C6	C5	O5	67.4	52.9
H6C2	C6	C5	H5	304.1	292.6
C5	C6	H6C2	C1	131.5	119.0
C5	C6	H6C2	H6C1	245.7	239.5
H6C2	C6	C1	C	310.6	289.3
H6C2	C6	C1	H1	57.1	49.1
C1	C6	H6C2	H6C1	114.3	120.4
O1	C	C1	H1	223.6	240.3
C1	C	O1	O2	191.4	179.9
O1	C	O2	HC	11.6	359.9
O2	C	C1	H1	54.0	60.2
C1	C	O2	O1	168.4	180.1
HB	O5	C5	H5	303.3	299.9