PDB Chemical Component DGY

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for DGY

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 O1 1.283 1.343
C1 O2 1.250 1.207
C1 C2 1.533 1.506
O1 H1 0.951 0.967
C2 O3 1.454 1.429
C2 C3 1.528 1.529
C2 H2 1.115 1.090
O3 H3 0.950 0.966
C3 O4 1.433 1.429
C3 H3C1 1.115 1.090
C3 H3C2 1.115 1.090
O4 H4 0.950 0.967

Bond Angles for DGY

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O1 C1 O2 122.5 119.9
O1 C1 C2 122.3 120.0
C1 O1 H1 122.5 120.0
O2 C1 C2 115.3 120.1
C1 C2 O3 112.6 109.4
C1 C2 C3 111.3 109.5
C1 C2 H2 108.9 109.5
O3 C2 C3 106.3 109.5
O3 C2 H2 108.9 109.4
C2 O3 H3 112.6 106.8
C3 C2 H2 108.9 109.5
C2 C3 O4 109.4 109.5
C2 C3 H3C1 112.2 109.4
C2 C3 H3C2 112.2 109.4
O4 C3 H3C1 112.2 109.5
O4 C3 H3C2 112.2 109.5
C3 O4 H4 109.4 106.7
H3C1 C3 H3C2 98.2 109.5

Torsion Angles for DGY

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O2 C1 O1 C2 179.5 180.0
O1 C1 C2 O3 13.9 180.0
O1 C1 C2 C3 254.7 60.0
O1 C1 C2 H2 134.7 299.9
O1 C1 O2 C2 180.4 180.0
O2 C1 O1 H1 179.9 359.9
O2 C1 C2 O3 194.3 0.0
O2 C1 C2 C3 75.1 240.0
O2 C1 C2 H2 315.1 119.9
O1 C1 C2 O2 179.6 180.0
C2 C1 O1 H1 0.4 179.9
O3 C2 C1 C3 119.2 120.0
O3 C2 C1 H2 239.2 240.1
C1 C2 O3 H3 180.0 299.9
C3 C2 C1 H2 120.0 120.1
C1 C2 C3 O4 309.5 180.0
C1 C2 C3 H3C1 184.2 59.9
C1 C2 C3 H3C2 74.7 300.0
H1 O1 C1 O2 179.9 359.9
H1 O1 C1 C2 0.4 179.9
C1 C2 O3 C3 237.9 239.9
C1 C2 O3 H2 120.8 119.9
C3 C2 O3 H2 242.9 240.0
O3 C2 C3 O4 186.6 60.0
O3 C2 C3 H3C1 61.3 299.9
O3 C2 C3 H3C2 311.8 180.0
C1 C2 C3 O3 122.9 120.0
C1 C2 C3 H2 240.0 239.9
O3 C2 C3 H2 117.1 119.9
C3 C2 O3 H3 302.1 60.0
O4 C3 C2 H3C1 125.3 120.0
O4 C3 C2 H3C2 234.7 240.0
C2 C3 O4 H4 180.0 180.0
H3C1 C3 C2 H3C2 109.5 120.0
C1 C2 H2 O3 236.9 240.1
C1 C2 H2 C3 121.5 120.1
O3 C2 H2 C3 244.5 240.0
H2 C2 O3 H3 59.2 180.0
H2 C2 C3 O4 69.5 300.0
H2 C2 C3 H3C1 304.2 180.0
H2 C2 C3 H3C2 194.7 60.0
H3 O3 C2 C3 302.1 60.0
H3 O3 C2 H2 59.2 180.0
O4 C3 C2 H2 69.5 300.0
C2 C3 O4 H3C1 234.7 240.0
C2 C3 O4 H3C2 125.2 120.0
H3C1 C3 O4 H3C2 250.5 239.9
H3C1 C3 C2 H2 304.2 180.0
C2 C3 H3C1 O4 123.7 120.0
C2 C3 H3C1 H3C2 241.9 240.1
O4 C3 H3C1 H3C2 118.2 120.1
H3C1 C3 O4 H4 305.2 299.9
H3C2 C3 C2 H2 194.7 60.0
C2 C3 H3C2 O4 236.3 240.0
C2 C3 H3C2 H3C1 118.1 119.9
O4 C3 H3C2 H3C1 241.8 239.9
H3C2 C3 O4 H4 54.7 60.0
H4 O4 C3 H3C1 305.2 299.9
H4 O4 C3 H3C2 54.7 60.0