PDB Chemical Component DEW
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for DEW
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
N2 |
C9 |
1.476 |
1.469 |
C9 |
C8 |
1.552 |
1.507 |
O1 |
C8 |
1.233 |
1.212 |
C8 |
N1 |
1.358 |
1.348 |
N1 |
C6 |
1.506 |
1.470 |
N1 |
C5 |
1.509 |
1.470 |
C6 |
C7 |
1.490 |
1.532 |
C5 |
C3 |
1.404 |
1.524 |
C3 |
C2 |
1.357 |
1.391 |
C3 |
C4 |
1.358 |
1.347 |
C2 |
C1 |
1.341 |
1.329 |
C7 |
C4 |
1.426 |
1.514 |
C4 |
S1 |
1.684 |
1.759 |
C1 |
S1 |
1.654 |
1.757 |
C5 |
H1 |
1.100 |
1.090 |
C5 |
H2 |
1.100 |
1.090 |
C6 |
H3 |
1.100 |
1.090 |
C6 |
H4 |
1.100 |
1.090 |
C7 |
H5 |
1.100 |
1.090 |
C7 |
H6 |
1.100 |
1.091 |
C9 |
H7 |
1.100 |
1.090 |
C9 |
H8 |
1.100 |
1.090 |
N2 |
H9 |
1.000 |
1.009 |
N2 |
H10 |
1.000 |
1.009 |
C1 |
H12 |
1.080 |
1.081 |
C2 |
H13 |
1.080 |
1.080 |
Bond Angles for DEW
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
N2 |
C9 |
H7 |
109.0 |
109.5 |
N2 |
C9 |
H8 |
109.0 |
109.4 |
C9 |
C8 |
N1 |
118.7 |
120.0 |
N1 |
C6 |
H3 |
109.2 |
109.6 |
N1 |
C6 |
H4 |
109.2 |
109.8 |
N1 |
C5 |
C3 |
109.6 |
107.8 |
N1 |
C5 |
H1 |
109.4 |
109.8 |
N1 |
C5 |
H2 |
109.4 |
109.8 |
C7 |
C6 |
H3 |
109.1 |
109.6 |
C7 |
C6 |
H4 |
109.2 |
109.6 |
C6 |
C7 |
H5 |
109.5 |
109.5 |
C6 |
C7 |
H6 |
109.5 |
109.5 |
C5 |
C3 |
C2 |
127.5 |
123.6 |
C3 |
C5 |
H1 |
109.4 |
109.8 |
C3 |
C5 |
H2 |
109.4 |
109.8 |
C3 |
C2 |
C1 |
115.3 |
115.7 |
C3 |
C2 |
H13 |
122.4 |
122.2 |
C3 |
C4 |
S1 |
106.2 |
109.8 |
C2 |
C1 |
H12 |
126.3 |
125.2 |
C7 |
C4 |
S1 |
133.3 |
125.1 |
H1 |
C5 |
H2 |
109.5 |
109.8 |
H3 |
C6 |
H4 |
109.5 |
109.6 |
H5 |
C7 |
H6 |
109.5 |
109.6 |
H7 |
C9 |
H8 |
109.5 |
109.5 |
H9 |
N2 |
H10 |
109.5 |
111.0 |
Torsion Angles for DEW
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
H7 |
C9 |
N2 |
H8 |
240.5 |
120.0 |
C8 |
N1 |
C6 |
H3 |
305.6 |
355.3 |
C8 |
N1 |
C6 |
H4 |
65.2 |
234.9 |
C8 |
N1 |
C5 |
C3 |
219.5 |
225.1 |
C8 |
N1 |
C5 |
H1 |
339.5 |
344.7 |
C8 |
N1 |
C5 |
H2 |
99.5 |
105.5 |
C6 |
N1 |
C5 |
C3 |
38.2 |
45.0 |
C6 |
N1 |
C5 |
H1 |
158.2 |
164.6 |
C6 |
N1 |
C5 |
H2 |
278.2 |
285.4 |
C7 |
C6 |
N1 |
H3 |
239.8 |
119.7 |
C7 |
C6 |
N1 |
H4 |
120.2 |
240.2 |
N1 |
C6 |
C7 |
H5 |
72.3 |
285.6 |
N1 |
C6 |
C7 |
H6 |
192.5 |
165.4 |
H3 |
C6 |
N1 |
H4 |
240.4 |
120.5 |
N1 |
C5 |
C3 |
C2 |
137.4 |
168.6 |
C3 |
C5 |
N1 |
H1 |
240.0 |
240.4 |
C3 |
C5 |
N1 |
H2 |
120.0 |
119.6 |
H1 |
C5 |
N1 |
H2 |
240.0 |
239.2 |
N1 |
C6 |
C7 |
H3 |
120.2 |
240.3 |
N1 |
C6 |
C7 |
H4 |
239.8 |
119.9 |
C6 |
C7 |
C4 |
S1 |
227.3 |
162.2 |
H3 |
C6 |
C7 |
H4 |
119.6 |
239.7 |
H5 |
C7 |
C6 |
H6 |
239.9 |
120.2 |
N1 |
C5 |
C3 |
H1 |
120.0 |
119.6 |
N1 |
C5 |
C3 |
H2 |
240.0 |
240.4 |
C5 |
C3 |
C2 |
C1 |
180.0 |
179.5 |
C5 |
C3 |
C2 |
H13 |
0.0 |
359.7 |
C5 |
C3 |
C4 |
S1 |
180.2 |
180.3 |
H1 |
C5 |
C3 |
H2 |
119.9 |
120.8 |
C2 |
C3 |
C5 |
H1 |
17.3 |
49.0 |
C2 |
C3 |
C5 |
H2 |
257.4 |
288.2 |
C2 |
C3 |
C4 |
S1 |
0.6 |
0.1 |
C3 |
C2 |
C1 |
H12 |
180.0 |
180.1 |
C7 |
C4 |
C3 |
S1 |
178.8 |
180.3 |
C3 |
C2 |
C1 |
H13 |
180.0 |
180.2 |
C3 |
C4 |
C7 |
S1 |
181.6 |
179.6 |
C3 |
C2 |
C1 |
S1 |
0.0 |
0.3 |
N1 |
C5 |
H1 |
C3 |
239.8 |
241.7 |
N1 |
C5 |
H1 |
H2 |
119.9 |
120.8 |
H1 |
C5 |
C3 |
C2 |
17.3 |
49.0 |
C3 |
C5 |
H1 |
H2 |
240.1 |
239.2 |
N1 |
C5 |
H2 |
C3 |
120.1 |
118.3 |
N1 |
C5 |
H2 |
H1 |
240.0 |
239.1 |
H2 |
C5 |
C3 |
C2 |
257.4 |
288.2 |
C3 |
C5 |
H2 |
H1 |
119.9 |
120.8 |
N1 |
C6 |
H3 |
H4 |
119.4 |
239.4 |
C7 |
C6 |
H3 |
H4 |
240.6 |
120.3 |
H3 |
C6 |
C7 |
H5 |
312.1 |
45.4 |
H3 |
C6 |
C7 |
H6 |
72.3 |
285.2 |
N1 |
C6 |
H4 |
H3 |
240.6 |
120.5 |
C7 |
C6 |
H4 |
H3 |
119.4 |
239.7 |
H4 |
C6 |
C7 |
H5 |
192.5 |
165.7 |
H4 |
C6 |
C7 |
H6 |
312.7 |
45.5 |
H5 |
C7 |
C6 |
H3 |
312.1 |
45.4 |
H5 |
C7 |
C6 |
H4 |
192.5 |
165.7 |
C6 |
C7 |
H5 |
H6 |
120.2 |
239.8 |
H5 |
C7 |
C4 |
S1 |
107.4 |
282.1 |
H6 |
C7 |
C6 |
H3 |
72.3 |
285.2 |
H6 |
C7 |
C6 |
H4 |
312.7 |
45.5 |
C6 |
C7 |
H6 |
H5 |
239.8 |
120.2 |
H6 |
C7 |
C4 |
S1 |
347.3 |
42.3 |
N2 |
C9 |
H7 |
H8 |
119.2 |
240.0 |
H7 |
C9 |
C8 |
N1 |
51.0 |
300.1 |
N2 |
C9 |
H8 |
H7 |
240.8 |
120.0 |
H8 |
C9 |
C8 |
N1 |
291.6 |
60.1 |
H9 |
N2 |
C9 |
H7 |
300.3 |
60.0 |
H9 |
N2 |
C9 |
H8 |
59.7 |
300.0 |
H10 |
N2 |
C9 |
H7 |
60.3 |
183.9 |
H10 |
N2 |
C9 |
H8 |
179.8 |
63.9 |
C3 |
C2 |
H13 |
C1 |
180.0 |
179.8 |
H13 |
C2 |
C1 |
H12 |
0.0 |
359.9 |