PDB Chemical Component DES

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for DES

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
CP9 CP8 1.485 1.529
CP9 HP91 1.116 1.090
CP9 HP92 1.114 1.090
CP9 HP93 1.114 1.090
CP8 CP7 1.533 1.507
CP8 HP81 1.116 1.089
CP8 HP82 1.115 1.090
CP7 CP6 1.513 1.474
CP7 C7 1.319 1.341
CP6 CP1 1.400 1.397
CP6 CP5 1.393 1.397
CP1 CP2 1.399 1.378
CP1 HP1 1.104 1.080
CP2 CP3 1.393 1.388
CP2 HP2 1.104 1.080
CP3 OP3 1.389 1.359
CP3 CP4 1.386 1.389
OP3 HOP3 0.949 0.967
CP4 CP5 1.400 1.379
CP4 HP4 1.102 1.080
CP5 HP5 1.102 1.080
C7 C6 1.504 1.473
C7 C8 1.518 1.507
C6 C5 1.399 1.398
C6 C1 1.405 1.396
C5 C4 1.399 1.378
C5 H5 1.102 1.080
C4 C3 1.396 1.388
C4 H4 1.103 1.080
C3 O3 1.392 1.359
C3 C2 1.409 1.389
O3 HO3 0.950 0.967
C2 C1 1.408 1.378
C2 H2 1.102 1.079
C1 H1 1.103 1.080
C8 C9 1.498 1.529
C8 H81 1.114 1.090
C8 H82 1.115 1.090
C9 H91 1.114 1.090
C9 H92 1.115 1.090
C9 H93 1.115 1.090

Bond Angles for DES

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
CP8 CP9 HP91 114.0 109.5
CP8 CP9 HP92 110.5 109.5
CP8 CP9 HP93 110.5 109.4
CP9 CP8 CP7 114.0 109.5
CP9 CP8 HP81 110.5 109.5
CP9 CP8 HP82 110.6 109.5
HP91 CP9 HP92 110.5 109.5
HP91 CP9 HP93 110.6 109.5
HP92 CP9 HP93 99.8 109.4
CP7 CP8 HP81 110.6 109.5
CP7 CP8 HP82 110.5 109.5
CP8 CP7 CP6 113.2 120.0
CP8 CP7 C7 124.6 120.0
HP81 CP8 HP82 99.7 109.4
CP6 CP7 C7 122.1 120.0
CP7 CP6 CP1 121.1 120.1
CP7 CP6 CP5 120.5 120.1
CP7 C7 C6 122.8 120.0
CP7 C7 C8 124.0 120.0
CP1 CP6 CP5 118.4 119.8
CP6 CP1 CP2 120.6 119.9
CP6 CP1 HP1 119.8 120.0
CP6 CP5 CP4 121.6 119.9
CP6 CP5 HP5 118.9 120.1
CP2 CP1 HP1 119.6 120.1
CP1 CP2 CP3 119.8 120.1
CP1 CP2 HP2 120.3 120.0
CP3 CP2 HP2 119.9 119.9
CP2 CP3 OP3 121.8 119.9
CP2 CP3 CP4 120.6 120.2
OP3 CP3 CP4 117.6 119.9
CP3 OP3 HOP3 121.8 106.8
CP3 CP4 CP5 119.0 120.1
CP3 CP4 HP4 120.0 120.0
CP5 CP4 HP4 121.0 119.9
CP4 CP5 HP5 119.5 120.0
C6 C7 C8 113.1 120.0
C7 C6 C5 120.5 120.1
C7 C6 C1 120.9 120.1
C7 C8 C9 113.3 109.5
C7 C8 H81 110.8 109.5
C7 C8 H82 110.8 109.5
C5 C6 C1 118.6 119.8
C6 C5 C4 121.1 119.9
C6 C5 H5 119.5 120.0
C6 C1 C2 121.3 119.9
C6 C1 H1 119.3 120.0
C4 C5 H5 119.4 120.1
C5 C4 C3 119.8 120.1
C5 C4 H4 120.2 119.9
C3 C4 H4 120.0 120.0
C4 C3 O3 121.6 119.9
C4 C3 C2 120.5 120.2
O3 C3 C2 117.9 119.9
C3 O3 HO3 121.5 106.8
C3 C2 C1 118.7 120.1
C3 C2 H2 120.7 119.9
C1 C2 H2 120.6 120.0
C2 C1 H1 119.5 120.1
C9 C8 H81 110.8 109.5
C9 C8 H82 110.8 109.4
C8 C9 H91 113.3 109.5
C8 C9 H92 110.9 109.5
C8 C9 H93 110.8 109.4
H81 C8 H82 99.6 109.4
H91 C9 H92 110.8 109.5
H91 C9 H93 110.9 109.4
H92 C9 H93 99.4 109.5

Torsion Angles for DES

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
HP91 CP9 CP8 HP92 234.8 239.9
HP91 CP9 CP8 HP93 125.3 120.0
HP92 CP9 CP8 HP93 250.5 240.1
CP7 CP8 CP9 HP81 234.7 239.9
CP7 CP8 CP9 HP82 125.3 120.0
CP9 CP8 CP7 CP6 63.5 120.0
CP9 CP8 CP7 C7 245.2 300.0
HP81 CP8 CP9 HP82 250.6 240.1
CP8 CP9 HP91 HP92 125.2 120.0
CP8 CP9 HP91 HP93 234.8 240.0
HP91 CP9 CP8 CP7 180.0 60.0
HP91 CP9 CP8 HP81 305.3 180.0
HP91 CP9 CP8 HP82 54.7 300.0
HP92 CP9 HP91 HP93 109.6 120.0
CP8 CP9 HP92 HP91 232.9 240.0
CP8 CP9 HP92 HP93 116.4 119.9
HP92 CP9 CP8 CP7 305.2 180.0
HP92 CP9 CP8 HP81 70.5 300.1
HP92 CP9 CP8 HP82 179.9 60.0
HP91 CP9 HP92 HP93 243.5 240.0
CP8 CP9 HP93 HP91 127.1 120.0
CP8 CP9 HP93 HP92 243.6 240.0
HP93 CP9 CP8 CP7 54.7 300.0
HP93 CP9 CP8 HP81 180.0 60.0
HP93 CP9 CP8 HP82 289.5 180.0
HP91 CP9 HP93 HP92 116.5 120.0
CP7 CP8 CP9 HP91 180.0 60.0
CP7 CP8 CP9 HP92 305.2 180.0
CP7 CP8 CP9 HP93 54.7 300.0
CP9 CP8 CP7 HP81 125.3 120.0
CP9 CP8 CP7 HP82 234.7 240.0
HP81 CP8 CP7 HP82 109.4 120.0
CP6 CP7 CP8 C7 178.4 180.0
CP8 CP7 CP6 CP1 81.7 249.0
CP8 CP7 CP6 CP5 264.3 68.8
CP8 CP7 C7 C6 9.9 353.5
CP8 CP7 C7 C8 187.2 173.4
HP81 CP8 CP9 HP91 305.3 180.0
HP81 CP8 CP9 HP92 70.5 300.1
HP81 CP8 CP9 HP93 180.0 60.0
CP9 CP8 HP81 CP7 232.8 240.0
CP9 CP8 HP81 HP82 116.4 120.0
CP7 CP8 HP81 HP82 243.6 240.0
HP81 CP8 CP7 CP6 298.2 0.0
HP81 CP8 CP7 C7 119.9 180.0
HP82 CP8 CP9 HP91 54.7 300.0
HP82 CP8 CP9 HP92 179.9 60.0
HP82 CP8 CP9 HP93 289.5 180.0
CP9 CP8 HP82 CP7 127.2 120.0
CP9 CP8 HP82 HP81 243.6 240.0
CP7 CP8 HP82 HP81 116.4 120.0
HP82 CP8 CP7 CP6 188.8 240.0
HP82 CP8 CP7 C7 10.5 60.0
CP6 CP7 CP8 HP81 298.2 0.0
CP6 CP7 CP8 HP82 188.8 240.0
CP8 CP7 CP6 C7 181.6 180.0
CP6 CP7 C7 C6 191.7 173.4
CP6 CP7 C7 C8 9.0 353.4
CP1 CP6 CP7 CP5 177.4 180.2
CP7 CP6 CP1 CP2 183.1 180.0
CP7 CP6 CP1 HP1 3.1 0.1
CP7 CP6 CP5 CP4 176.9 179.7
CP7 CP6 CP5 HP5 356.9 0.3
C7 CP7 CP8 HP81 119.9 180.0
C7 CP7 CP8 HP82 10.5 60.0
CP8 CP7 C7 CP6 178.2 180.0
C7 CP7 CP6 CP1 260.1 69.0
C7 CP7 CP6 CP5 82.7 248.8
C6 C7 CP7 C8 182.7 180.0
CP7 C7 C6 C5 73.0 119.9
CP7 C7 C6 C1 252.6 299.7
CP7 C7 C8 C9 90.6 94.7
CP7 C7 C8 H81 215.8 214.8
CP7 C7 C8 H82 325.3 334.7
CP1 CP6 CP7 C7 260.1 69.0
CP7 CP6 CP1 CP5 182.6 179.8
CP1 CP6 CP5 CP4 359.4 359.5
CP1 CP6 CP5 HP5 179.5 180.1
CP2 CP1 CP6 HP1 180.0 179.9
CP6 CP1 CP2 CP3 359.8 0.1
CP6 CP1 CP2 HP2 179.7 180.0
CP5 CP6 CP7 C7 82.7 248.8
CP7 CP6 CP5 CP1 177.4 180.2
CP5 CP6 CP1 CP2 0.5 0.2
CP5 CP6 CP1 HP1 180.6 180.3
CP3 CP4 CP5 CP6 0.3 0.6
CP6 CP5 CP4 HP4 180.3 180.3
CP4 CP5 CP6 HP5 180.0 179.4
CP2 CP1 CP6 CP5 0.5 0.2
CP6 CP1 CP2 HP1 180.0 180.1
CP3 CP2 CP1 HP2 180.0 180.1
CP1 CP2 CP3 OP3 178.0 180.0
CP1 CP2 CP3 CP4 360.0 360.0
HP1 CP1 CP6 CP5 180.6 180.3
CP6 CP1 HP1 CP2 180.0 179.9
HP1 CP1 CP2 CP3 179.7 179.9
HP1 CP1 CP2 HP2 359.7 359.9
CP3 CP2 CP1 HP1 179.7 179.9
CP1 CP2 CP3 HP2 180.0 179.9
OP3 CP3 CP2 CP4 178.0 180.0
CP2 CP3 OP3 HOP3 180.0 90.0
CP2 CP3 CP4 CP5 0.0 359.7
CP2 CP3 CP4 HP4 180.0 180.0
HP2 CP2 CP1 HP1 359.7 359.9
CP1 CP2 HP2 CP3 180.0 180.1
HP2 CP2 CP3 OP3 358.0 0.1
HP2 CP2 CP3 CP4 180.0 180.0
OP3 CP3 CP2 HP2 358.0 0.1
CP2 CP3 OP3 CP4 181.9 180.0
OP3 CP3 CP4 CP5 181.9 179.7
OP3 CP3 CP4 HP4 1.9 359.9
CP6 CP5 CP4 CP3 0.3 0.6
CP4 CP3 CP2 HP2 180.0 180.0
CP2 CP3 CP4 OP3 178.1 180.0
CP4 CP3 OP3 HOP3 358.1 270.1
CP5 CP4 CP3 HP4 180.0 179.7
CP3 CP4 CP5 HP5 180.3 180.0
HOP3 OP3 CP3 CP4 358.1 270.1
CP6 CP5 CP4 HP5 180.0 180.6
CP3 CP4 CP5 HP4 180.0 180.3
CP3 CP4 HP4 CP5 180.0 179.7
HP4 CP4 CP5 HP5 0.3 359.7
CP6 CP5 HP5 CP4 180.0 179.4
HP5 CP5 CP4 HP4 0.3 359.7
CP7 C7 C6 C8 177.6 180.0
C6 C7 C8 C9 268.1 274.7
C6 C7 C8 H81 33.3 34.7
C6 C7 C8 H82 142.9 154.7
C5 C6 C7 C1 180.4 180.3
C7 C6 C5 C4 179.0 180.0
C7 C6 C5 H5 359.0 0.0
C7 C6 C1 C2 181.0 179.7
C7 C6 C1 H1 1.1 0.2
CP7 C7 C8 C6 182.5 180.0
C8 C7 C6 C5 255.4 300.0
C8 C7 C6 C1 75.1 119.7
C9 C8 C7 H81 234.8 239.9
C9 C8 C7 H82 125.2 120.0
C7 C8 C9 H91 180.0 178.1
C7 C8 C9 H92 305.3 298.2
C7 C8 C9 H93 54.7 58.1
H81 C8 C7 H82 250.4 240.0
C5 C6 C7 C8 255.4 300.0
C7 C6 C5 C1 179.7 179.7
C5 C6 C1 C2 0.7 359.4
C5 C6 C1 H1 180.7 180.0
C4 C5 C6 H5 180.0 180.0
C6 C5 C4 C3 0.6 0.0
C6 C5 C4 H4 180.6 180.0
C1 C6 C7 C8 75.1 119.7
C7 C6 C1 C5 180.3 180.3
C1 C6 C5 C4 359.4 0.3
C1 C6 C5 H5 179.3 180.3
C3 C2 C1 C6 359.3 0.5
C6 C1 C2 H2 179.4 180.3
C2 C1 C6 H1 179.9 179.5
C4 C5 C6 C1 359.4 0.3
C6 C5 C4 H5 180.0 180.0
C3 C4 C5 H4 180.0 180.0
C5 C4 C3 O3 179.6 180.1
C5 C4 C3 C2 359.4 359.9
H5 C5 C6 C1 179.3 180.3
C6 C5 H5 C4 180.0 180.0
H5 C5 C4 C3 180.6 180.0
H5 C5 C4 H4 0.6 0.0
C3 C4 C5 H5 180.6 180.0
C5 C4 C3 H4 180.0 180.0
O3 C3 C4 C2 180.2 180.1
C4 C3 O3 HO3 180.1 89.9
C4 C3 C2 C1 0.6 359.8
C4 C3 C2 H2 180.6 180.0
H4 C4 C5 H5 0.6 0.0
C5 C4 H4 C3 180.0 180.0
H4 C4 C3 O3 359.6 0.1
H4 C4 C3 C2 179.4 179.9
O3 C3 C4 H4 359.6 0.1
C4 C3 O3 C2 179.8 179.9
O3 C3 C2 C1 180.5 179.6
O3 C3 C2 H2 0.4 359.9
C6 C1 C2 C3 359.3 0.5
C2 C3 C4 H4 179.4 179.9
C4 C3 C2 O3 180.2 180.1
C2 C3 O3 HO3 0.3 270.1
C1 C2 C3 H2 180.1 179.8
C3 C2 C1 H1 179.3 180.0
HO3 O3 C3 C2 0.3 270.1
C6 C1 C2 H1 180.1 180.5
C3 C2 C1 H2 179.9 180.2
C3 C2 H2 C1 180.1 179.8
H2 C2 C1 H1 359.3 359.8
C6 C1 H1 C2 180.0 179.5
H1 C1 C2 H2 359.3 359.8
C7 C8 C9 H81 125.2 120.1
C7 C8 C9 H82 234.8 240.0
H81 C8 C9 H82 109.5 119.9
H91 C9 C8 H92 234.7 239.9
H91 C9 C8 H93 125.3 120.0
H92 C9 C8 H93 250.6 240.0
C7 C8 H81 C9 233.4 239.9
C7 C8 H81 H82 116.7 120.0
C9 C8 H81 H82 243.3 240.1
H81 C8 C9 H91 54.8 58.0
H81 C8 C9 H92 180.0 178.0
H81 C8 C9 H93 289.5 298.0
C7 C8 H82 C9 126.6 120.0
C7 C8 H82 H81 243.3 240.0
C9 C8 H82 H81 116.7 119.9
H82 C8 C9 H91 305.3 298.1
H82 C8 C9 H92 70.5 58.1
H82 C8 C9 H93 179.9 178.1
H91 C9 C8 H81 54.8 58.0
H91 C9 C8 H82 305.3 298.1
C8 C9 H91 H92 125.3 120.0
C8 C9 H91 H93 234.7 240.0
H92 C9 H91 H93 109.4 120.0
H92 C9 C8 H81 180.0 178.0
H92 C9 C8 H82 70.5 58.1
C8 C9 H92 H91 233.3 239.9
C8 C9 H92 H93 116.6 119.9
H91 C9 H92 H93 243.3 240.0
H93 C9 C8 H81 289.5 298.0
H93 C9 C8 H82 179.9 178.1
C8 C9 H93 H91 126.7 120.0
C8 C9 H93 H92 243.3 240.0
H91 C9 H93 H92 116.6 120.0