PDB Chemical Component DCT

Ideal Model

Chemical Description

Name 2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATE
Formula C9 H16 N3 O12 P3
Formal charge 0
Molecular weight 451.158 g/mol
Component type DNA LINKING
Nonstandard Parent Id DC

Chemical features

Atom count 43
Chiral atom count 4
Chiral atoms C1' C4' PA PB
Bond count 44
Aromatic bond count 0

Chemical Identifiers

Systematic name (OpenEye OEToolkits) [(2S,5R)-5-(4-amino-2-oxo-pyrimidin-1-yl)oxolan-2-yl]methyl (hydroxy-phosphonooxy-phosphoryl) hydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) NC1=NC(=O)N(C=C1)[C@H]2CC[C@@H](CO[P@@](O)(=O)O[P@@](O)(=O)O[P](O)(O)=O)O2
SMILES (CACTVS) NC1=NC(=O)N(C=C1)[CH]2CC[CH](CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)O2
Stereo SMILES (OpenEye) C1C[C@@H](O[C@@H]1CO[P@](=O)(O)O[P@](=O)(O)OP(=O)(O)O)N2C=CC(=NC2=O)N
InChI descriptor InChI=1S/C9H16N3O12P3/c10-7-3-4-12(9(13)11-7)8-2-1-6(22-8)5-21-26(17,18)24-27(19,20)23-25(14,15)16/h3-4,6,8H,1-2,5H2,(H,17,18)(H,19,20)(H2,10,11,13)(H2,14,15,16)/t6-,8+/m0/s1
InChIKey descriptor ARLKCWCREKRROD-POYBYMJQSA-N

Status Information

Last modified 2011-06-04
Created 1999-07-08
Release status REL
Model PDB code 1BPY
Processing site RCSB