PDB Chemical Component DCJ

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for DCJ

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
O4 C7 1.255 1.215
C7 O3 1.255 1.347
C7 C6 1.486 1.482
C6 C5 1.368 1.394
C6 N1 1.290 1.324
C5 C4 1.419 1.393
N1 C2 1.302 1.324
C2 C1 1.489 1.481
C2 C3 1.397 1.395
C1 O2 1.261 1.347
C1 O1 1.257 1.214
C3 C4 1.439 1.391
C4 N2 1.428 1.400
N2 C8 1.391 1.364
N2 N3 1.386 1.403
C8 C9 1.306 1.350
N3 N4 1.284 1.288
N4 C9 1.428 1.334
C9 C10 1.489 1.507
C10 N5 1.430 1.469
N5 C13 1.431 1.469
N5 C14 1.429 1.469
N5 C11 1.430 1.469
C11 C12 1.490 1.530
C12 O5 1.224 1.429
C5 H5 1.080 1.080
C3 H3 1.080 1.080
O2 H2 0.950 0.967
C8 H8 1.080 1.080
C10 H101 1.100 1.090
C10 H102 1.100 1.090
C13 H131 1.100 1.090
C13 H132 1.100 1.090
C13 H133 1.100 1.090
C14 H141 1.100 1.089
C14 H142 1.100 1.091
C14 H143 1.100 1.090
C11 H111 1.100 1.091
C11 H112 1.099 1.090
O3 HO3 0.951 0.967
O5 HO5 0.950 0.968
C12 H121 1.100 1.090
C12 H122 1.100 1.089

Bond Angles for DCJ

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O4 C7 O3 120.0 120.0
O4 C7 C6 120.1 120.0
O3 C7 C6 119.8 120.0
C7 O3 HO3 109.5 117.0
C7 C6 C5 120.6 119.6
C7 C6 N1 119.3 119.6
C5 C6 N1 120.1 120.8
C6 C5 C4 118.4 119.2
C6 C5 H5 120.8 120.4
C6 N1 C2 124.9 121.7
C5 C4 C3 119.9 118.4
C5 C4 N2 118.6 120.8
C4 C5 H5 120.8 120.4
N1 C2 C1 117.5 119.6
N1 C2 C3 122.3 120.7
C1 C2 C3 120.2 119.6
C2 C1 O2 120.4 120.0
C2 C1 O1 119.1 120.0
C2 C3 C4 114.3 119.2
C2 C3 H3 122.8 120.4
O2 C1 O1 120.5 120.0
C1 O2 H2 109.5 117.0
C3 C4 N2 121.3 120.9
C4 C3 H3 122.9 120.4
C4 N2 C8 129.7 126.8
C4 N2 N3 122.5 126.9
C8 N2 N3 107.7 106.3
N2 C8 C9 106.9 106.7
N2 C8 H8 126.5 126.6
N2 N3 N4 108.7 108.0
C8 C9 N4 108.7 109.0
C8 C9 C10 126.7 125.4
C9 C8 H8 126.6 126.6
N3 N4 C9 107.9 109.9
N4 C9 C10 124.5 125.5
C9 C10 N5 120.1 109.5
C9 C10 H101 106.8 109.5
C9 C10 H102 106.7 109.5
C10 N5 C13 110.3 109.5
C10 N5 C14 109.4 109.5
C10 N5 C11 108.5 109.5
N5 C10 H101 106.7 109.5
N5 C10 H102 106.7 109.5
C13 N5 C14 109.4 109.5
C13 N5 C11 109.7 109.5
N5 C13 H131 109.5 109.5
N5 C13 H132 109.4 109.5
N5 C13 H133 109.4 109.5
C14 N5 C11 109.6 109.5
N5 C14 H141 109.5 109.5
N5 C14 H142 109.4 109.4
N5 C14 H143 109.5 109.5
N5 C11 C12 118.7 109.5
N5 C11 H111 107.1 109.5
N5 C11 H112 107.1 109.4
C11 C12 O5 119.8 109.4
C12 C11 H111 107.1 109.5
C12 C11 H112 107.1 109.5
C11 C12 H121 106.8 109.4
C11 C12 H122 106.8 109.5
C12 O5 HO5 109.5 114.0
O5 C12 H121 106.8 109.5
O5 C12 H122 106.8 109.5
H101 C10 H102 109.5 109.5
H131 C13 H132 109.5 109.5
H131 C13 H133 109.4 109.4
H132 C13 H133 109.5 109.4
H141 C14 H142 109.4 109.5
H141 C14 H143 109.5 109.5
H142 C14 H143 109.5 109.5
H111 C11 H112 109.5 109.5
H121 C12 H122 109.5 109.4

Torsion Angles for DCJ

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O3 C7 O4 C6 176.5 180.3
O4 C7 O3 HO3 0.0 360.0
O4 C7 C6 C5 356.3 0.0
O4 C7 C6 N1 174.3 179.7
O4 C7 O3 C6 183.5 179.7
O3 C7 C6 C5 179.9 179.7
O3 C7 C6 N1 357.9 359.4
O4 C7 C6 O3 176.5 180.3
C6 C7 O3 HO3 176.5 180.3
C5 C6 C7 N1 182.0 180.3
C7 C6 C5 C4 179.8 180.0
C7 C6 C5 H5 359.8 359.9
C7 C6 N1 C2 180.7 180.0
C7 C6 C5 N1 178.0 179.7
C5 C6 N1 C2 358.7 359.7
C6 C5 C4 C3 357.3 0.0
C6 C5 C4 N2 182.2 180.0
C4 C5 C6 H5 180.0 180.0
C7 C6 N1 C5 182.0 180.3
N1 C6 C5 C4 1.9 0.3
N1 C6 C5 H5 181.8 180.3
C6 N1 C2 C1 179.6 180.1
C6 N1 C2 C3 1.6 0.0
C4 C5 C6 N1 1.9 0.3
C6 C5 C4 H5 180.0 180.0
C2 C3 C4 C5 2.9 359.7
C3 C4 C5 N2 175.1 180.0
C5 C4 C3 H3 182.8 179.9
C5 C4 N2 C8 204.1 180.0
C5 C4 N2 N3 28.5 359.7
C1 C2 N1 C3 178.0 180.0
N1 C2 C1 O2 179.5 360.0
N1 C2 C1 O1 356.8 180.0
N1 C2 C3 C4 357.7 0.3
N1 C2 C3 H3 177.7 180.1
N1 C2 C1 C3 182.0 180.0
C1 C2 C3 C4 179.8 180.3
C1 C2 C3 H3 359.8 0.0
O2 C1 C2 O1 182.7 179.9
C2 C1 O2 H2 177.3 180.0
C5 C4 C3 C2 2.9 359.7
N1 C2 C3 C1 177.9 180.0
C3 C2 C1 O2 357.5 180.0
C3 C2 C1 O1 174.8 0.1
C2 C3 C4 N2 177.8 179.8
C4 C3 C2 H3 180.0 180.2
O2 C1 C2 C3 357.5 180.0
C2 C1 O2 O1 177.3 180.1
O1 C1 C2 C3 174.8 0.1
C2 C1 O1 O2 182.7 179.9
O1 C1 O2 H2 360.0 360.0
C5 C4 C3 N2 185.1 180.0
C3 C4 C5 H5 177.3 180.0
C2 C3 C4 H3 180.0 179.8
C3 C4 N2 C8 29.1 360.0
C3 C4 N2 N3 213.5 179.6
C5 C4 N2 C3 175.0 180.0
N2 C4 C5 H5 2.2 360.0
N2 C4 C3 H3 357.8 360.0
C8 N2 C4 N3 175.5 180.4
C4 N2 C8 C9 182.4 180.0
C4 N2 C8 H8 2.4 360.0
C4 N2 N3 N4 177.8 180.0
C4 N2 C8 N3 184.0 179.7
C8 N2 N3 N4 1.5 359.7
N2 C8 C9 N4 1.1 359.8
N2 C8 C9 C10 180.7 180.0
C9 C8 N2 H8 180.0 180.0
C4 N2 N3 C8 176.4 180.3
N3 N2 C8 C9 358.4 0.3
N3 N2 C8 H8 178.4 180.3
N2 N3 N4 C9 359.2 0.2
C9 C8 N2 N3 358.4 0.3
N2 C8 C9 H8 180.0 180.0
N3 N4 C9 C8 359.8 360.0
N4 C9 C8 C10 180.4 179.8
C8 C9 C10 N5 115.4 95.0
C8 C9 C10 H101 236.9 215.0
C8 C9 C10 H102 353.9 335.0
C8 C9 N4 N3 359.8 360.0
N3 N4 C9 C10 180.2 179.8
C8 C9 N4 C10 179.6 180.2
N4 C9 C8 H8 181.1 179.8
N4 C9 C10 N5 294.9 275.2
N4 C9 C10 H101 56.4 35.2
N4 C9 C10 H102 173.5 155.2
C8 C9 C10 N4 180.5 179.8
C10 C9 C8 H8 0.7 360.0
C9 C10 N5 C13 41.4 300.0
C9 C10 N5 C14 281.0 60.0
C9 C10 N5 C11 161.5 180.0
N5 C10 C9 H101 238.5 240.1
N5 C10 C9 H102 121.5 120.0
H101 C10 C9 H102 243.0 240.0
C9 C10 N5 H101 121.5 119.9
C9 C10 N5 H102 238.5 240.0
C13 N5 C10 C14 120.4 240.0
C13 N5 C10 C11 239.9 120.0
C10 N5 C13 H131 180.0 60.0
C10 N5 C13 H132 300.0 180.1
C10 N5 C13 H133 60.0 300.0
C14 N5 C10 C11 119.5 240.0
C10 N5 C14 H141 180.0 69.1
C10 N5 C14 H142 300.0 189.1
C10 N5 C14 H143 60.0 309.0
C10 N5 C11 C12 67.1 175.1
C10 N5 C11 H111 188.4 295.1
C10 N5 C11 H112 305.8 55.0
H101 C10 N5 H102 117.0 120.0
C10 N5 C13 C14 239.6 120.0
C10 N5 C13 C11 119.4 240.0
C13 N5 C10 H101 279.9 180.0
C13 N5 C10 H102 162.9 60.0
C14 N5 C13 C11 239.8 120.0
C13 N5 C14 H141 59.1 189.1
C13 N5 C14 H142 179.0 309.1
C13 N5 C14 H143 299.0 69.1
C13 N5 C11 C12 187.6 55.1
C13 N5 C11 H111 308.9 175.1
C13 N5 C11 H112 66.3 295.0
H131 C13 N5 H132 240.0 240.0
H131 C13 N5 H133 120.0 120.0
H132 C13 N5 H133 240.0 240.0
C10 N5 C14 C13 121.0 240.0
C10 N5 C14 C11 241.2 120.0
C14 N5 C10 H101 159.4 300.0
C14 N5 C10 H102 42.4 180.0
C13 N5 C14 C11 120.3 240.0
C14 N5 C13 H131 300.4 300.0
C14 N5 C13 H132 60.4 60.0
C14 N5 C13 H133 180.4 180.0
C14 N5 C11 C12 307.7 295.1
C14 N5 C11 H111 69.1 55.1
C14 N5 C11 H112 186.4 175.0
H141 C14 N5 H142 240.0 240.0
H141 C14 N5 H143 120.0 120.1
H142 C14 N5 H143 240.0 240.1
C10 N5 C11 C13 239.5 120.0
C10 N5 C11 C14 119.4 240.0
C11 N5 C10 H101 40.0 60.0
C11 N5 C10 H102 283.0 300.0
C13 N5 C11 C14 239.9 120.0
C11 N5 C13 H131 60.6 180.0
C11 N5 C13 H132 180.6 300.0
C11 N5 C13 H133 300.6 60.0
C11 N5 C14 H141 298.8 309.1
C11 N5 C14 H142 58.8 69.1
C11 N5 C14 H143 178.8 189.1
N5 C11 C12 O5 307.8 67.5
C12 C11 N5 H111 238.7 240.0
C12 C11 N5 H112 121.3 120.0
N5 C11 C12 H121 69.2 187.5
N5 C11 C12 H122 186.3 307.4
H111 C11 N5 H112 242.6 240.0
N5 C11 C12 H111 121.3 120.0
N5 C11 C12 H112 238.7 240.0
C11 C12 O5 HO5 180.0 180.0
O5 C12 C11 H121 238.5 240.0
O5 C12 C11 H122 121.5 120.0
H111 C11 C12 H112 117.4 120.0
H121 C12 C11 H122 243.0 240.1
O5 C12 C11 H111 186.4 307.5
O5 C12 C11 H112 69.1 187.4
C11 C12 O5 H121 121.5 120.0
C11 C12 O5 H122 238.5 240.0
H121 C12 O5 H122 117.1 120.0
H5 C5 C6 N1 181.8 180.3
C6 C5 H5 C4 180.0 180.0
H5 C5 C4 C3 177.3 180.0
H5 C5 C4 N2 2.2 360.0
C2 C3 H3 C4 180.0 180.2
H3 C3 C4 N2 357.8 360.0
H2 O2 C1 O1 360.0 360.0
H8 C8 N2 N3 178.4 180.3
N2 C8 H8 C9 180.0 180.0
H8 C8 C9 N4 181.1 179.8
H8 C8 C9 C10 0.7 360.0
C9 C10 H101 N5 230.3 240.1
C9 C10 H101 H102 115.2 120.0
H101 C10 N5 C13 279.9 180.0
H101 C10 N5 C14 159.4 300.0
H101 C10 N5 C11 40.0 60.0
N5 C10 H101 H102 244.9 240.0
C9 C10 H102 N5 129.6 120.0
C9 C10 H102 H101 244.8 240.0
H102 C10 N5 C13 162.9 60.0
H102 C10 N5 C14 42.4 180.0
H102 C10 N5 C11 283.0 300.0
N5 C10 H102 H101 115.2 120.0
H131 C13 N5 C14 300.4 300.0
H131 C13 N5 C11 60.6 180.0
N5 C13 H131 H132 120.0 120.1
N5 C13 H131 H133 240.0 240.0
H132 C13 H131 H133 120.0 119.9
H132 C13 N5 C14 60.4 60.0
H132 C13 N5 C11 180.6 300.0
N5 C13 H132 H131 240.0 240.0
N5 C13 H132 H133 120.0 120.0
H131 C13 H132 H133 240.0 240.1
H133 C13 N5 C14 180.4 180.0
H133 C13 N5 C11 300.6 60.0
N5 C13 H133 H131 120.0 120.0
N5 C13 H133 H132 240.0 240.0
H131 C13 H133 H132 120.0 120.0
H141 C14 N5 C11 298.8 309.1
N5 C14 H141 H142 120.0 119.9
N5 C14 H141 H143 240.0 240.0
H142 C14 H141 H143 120.0 120.0
H142 C14 N5 C11 58.8 69.1
N5 C14 H142 H141 240.0 240.0
N5 C14 H142 H143 120.0 120.0
H141 C14 H142 H143 240.0 239.9
H143 C14 N5 C11 178.8 189.1
N5 C14 H143 H141 120.0 120.0
N5 C14 H143 H142 240.0 240.1
H141 C14 H143 H142 120.0 120.0
N5 C11 H111 C12 231.6 240.0
N5 C11 H111 H112 115.8 120.0
H111 C11 C12 O5 186.4 307.5
C12 C11 H111 H112 244.2 239.9
H111 C11 C12 H121 307.9 67.5
H111 C11 C12 H122 64.9 187.4
N5 C11 H112 C12 128.3 120.0
N5 C11 H112 H111 244.2 240.0
H112 C11 C12 O5 69.1 187.4
C12 C11 H112 H111 115.8 120.0
H112 C11 C12 H121 190.5 307.5
H112 C11 C12 H122 307.6 67.4
HO3 O3 C7 C6 176.5 180.3
HO5 O5 C12 H121 58.5 60.0
HO5 O5 C12 H122 301.5 300.0
C11 C12 H121 O5 230.6 240.0
H121 C12 C11 H111 307.9 67.5
H121 C12 C11 H112 190.5 307.5
C11 C12 H121 H122 115.3 120.0
H121 C12 O5 HO5 58.5 60.0
O5 C12 H121 H122 244.7 239.9
C11 C12 H122 O5 129.4 120.0
H122 C12 C11 H111 64.9 187.4
H122 C12 C11 H112 307.6 67.4
C11 C12 H122 H121 244.7 240.0
H122 C12 O5 HO5 301.5 300.0
O5 C12 H122 H121 115.3 120.0