data_DAR
# 
_chem_comp.id                                    DAR 
_chem_comp.name                                  D-ARGININE 
_chem_comp.type                                  "D-PEPTIDE LINKING" 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C6 H15 N4 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    1 
_chem_comp.pdbx_initial_date                     1999-07-08 
_chem_comp.pdbx_modified_date                    2023-11-03 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        175.209 
_chem_comp.one_letter_code                       R 
_chem_comp.three_letter_code                     DAR 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        ? 
_chem_comp.pdbx_ideal_coordinates_missing_flag   Y 
_chem_comp.pdbx_model_coordinates_db_code        1CZQ 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
DAR N    N    N 0 1 N N N 17.418 -6.202 32.216 -2.318 1.786  -0.308 N    DAR 1  
DAR CA   CA   C 0 1 N N R 18.673 -6.893 32.489 -2.260 0.486  0.373  CA   DAR 2  
DAR CB   CB   C 0 1 N N N 18.480 -8.408 32.369 -1.023 -0.282 -0.099 CB   DAR 3  
DAR CG   CG   C 0 1 N N N 18.169 -8.847 30.969 0.238  0.463  0.342  CG   DAR 4  
DAR CD   CD   C 0 1 N N N 19.397 -8.762 30.070 1.475  -0.305 -0.130 CD   DAR 5  
DAR NE   NE   N 0 1 N N N 19.715 -7.408 29.607 2.683  0.409  0.292  NE   DAR 6  
DAR CZ   CZ   C 0 1 N N N 20.121 -7.134 28.370 3.917  -0.093 -0.019 CZ   DAR 7  
DAR NH1  NH1  N 0 1 N N N 20.248 -8.118 27.481 4.020  -1.229 -0.705 NH1  DAR 8  
DAR NH2  NH2  N 1 1 N N N 20.409 -5.891 28.015 5.015  0.556  0.365  NH2  DAR 9  
DAR C    C    C 0 1 N N N 19.313 -6.582 33.833 -3.499 -0.308 0.047  C    DAR 10 
DAR O    O    O 0 1 N N N 19.994 -7.423 34.421 -3.870 -1.327 0.838  O    DAR 11 
DAR OXT  OXT  O 0 1 N Y N 19.100 -5.379 34.342 -4.157 -0.028 -0.926 OXT  DAR 12 
DAR H    H    H 0 1 N N N 17.546 -5.193 32.295 -2.371 1.593  -1.297 H    DAR 13 
DAR H2   HN2  H 0 1 N Y N 16.660 -6.537 32.811 -3.196 2.210  -0.048 H2   DAR 14 
DAR HA   HA   H 0 1 N N N 19.378 -6.505 31.717 -2.201 0.642  1.450  HA   DAR 15 
DAR HB2  1HB  H 0 1 N N N 19.363 -8.955 32.771 -1.027 -1.281 0.338  HB2  DAR 16 
DAR HB3  2HB  H 0 1 N N N 17.702 -8.768 33.082 -1.037 -0.361 -1.186 HB3  DAR 17 
DAR HG2  1HG  H 0 1 N N N 17.721 -9.868 30.951 0.242  1.462  -0.095 HG2  DAR 18 
DAR HG3  2HG  H 0 1 N N N 17.311 -8.275 30.543 0.253  0.542  1.429  HG3  DAR 19 
DAR HD2  1HD  H 0 1 N N N 20.280 -9.218 30.574 1.471  -1.303 0.307  HD2  DAR 20 
DAR HD3  2HD  H 0 1 N N N 19.293 -9.455 29.202 1.461  -0.383 -1.217 HD3  DAR 21 
DAR HE   HNE  H 0 1 N N N 20.411 -7.025 30.246 2.608  1.236  0.793  HE   DAR 22 
DAR HH11 1HH1 H 0 0 N N N 20.559 -7.907 26.532 3.221  -1.701 -0.985 HH11 DAR 23 
DAR HH12 2HH1 H 0 0 N N N 19.362 -8.621 27.426 4.896  -1.584 -0.926 HH12 DAR 24 
DAR HH21 1HH2 H 0 0 N N N 20.311 -5.137 28.695 5.890  0.200  0.145  HH21 DAR 25 
DAR HH22 2HH2 H 0 0 N N N 20.720 -5.680 27.066 4.940  1.384  0.865  HH22 DAR 26 
DAR HXT  HXT  H 0 1 N Y N 19.499 -5.184 35.181 ?      ?      ?      HXT  DAR 27 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
DAR N   CA   SING N N 1  
DAR N   H    SING N N 2  
DAR N   H2   SING N N 3  
DAR CA  CB   SING N N 4  
DAR CA  C    SING N N 5  
DAR CA  HA   SING N N 6  
DAR CB  CG   SING N N 7  
DAR CB  HB2  SING N N 8  
DAR CB  HB3  SING N N 9  
DAR CG  CD   SING N N 10 
DAR CG  HG2  SING N N 11 
DAR CG  HG3  SING N N 12 
DAR CD  NE   SING N N 13 
DAR CD  HD2  SING N N 14 
DAR CD  HD3  SING N N 15 
DAR NE  CZ   SING N N 16 
DAR NE  HE   SING N N 17 
DAR CZ  NH1  SING N N 18 
DAR CZ  NH2  DOUB N N 19 
DAR NH1 HH11 SING N N 20 
DAR NH1 HH12 SING N N 21 
DAR NH2 HH21 SING N N 22 
DAR NH2 HH22 SING N N 23 
DAR C   O    DOUB N N 24 
DAR C   OXT  SING N N 25 
DAR OXT HXT  SING N N 26 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
DAR SMILES           ACDLabs              10.04 "O=C(O)C(N)CCCN\C(=[NH2+])N"                                                                    
DAR SMILES_CANONICAL CACTVS               3.341 "N[C@H](CCCNC(N)=[NH2+])C(O)=O"                                                                 
DAR SMILES           CACTVS               3.341 "N[CH](CCCNC(N)=[NH2+])C(O)=O"                                                                  
DAR SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C(C[C@H](C(=O)O)N)CNC(=[NH2+])N"                                                               
DAR SMILES           "OpenEye OEToolkits" 1.5.0 "C(CC(C(=O)O)N)CNC(=[NH2+])N"                                                                   
DAR InChI            InChI                1.03  "InChI=1S/C6H14N4O2/c7-4(5(11)12)2-1-3-10-6(8)9/h4H,1-3,7H2,(H,11,12)(H4,8,9,10)/p+1/t4-/m1/s1" 
DAR InChIKey         InChI                1.03  ODKSFYDXXFIFQN-SCSAIBSYSA-O                                                                     
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
DAR "SYSTEMATIC NAME" ACDLabs              10.04 "amino{[(4R)-4-amino-4-carboxybutyl]amino}methaniminium"                 
DAR "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[amino-[[(4R)-4-amino-5-hydroxy-5-oxo-pentyl]amino]methylidene]azanium" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
DAR "Create component"   1999-07-08 RCSB 
DAR "Modify descriptor"  2011-06-04 RCSB 
DAR "Other modification" 2023-11-03 PDBE 
# 
