PDB Chemical Component DAH

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for DAH

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N CA 1.477 1.469
N H 1.000 1.009
N H2 1.000 1.008
CA C 1.517 1.507
CA CB 1.553 1.530
CA HA 1.100 1.090
C O 1.235 1.208
C OXT   1.342
CB CG 1.490 1.508
CB HB2 1.100 1.090
CB HB3 1.100 1.090
CG CD1 1.418 1.382
CG CD2 1.392 1.383
CD1 CE1 1.415 1.383
CD1 HD1 1.080 1.079
CD2 CE2 1.377 1.385
CD2 HD2 1.080 1.081
CE1 CZ 1.412 1.385
CE1 HE1 1.080 1.080
CE2 CZ 1.404 1.392
CE2 OE2 1.370 1.360
CZ OZ 1.383 1.360
OE2 HE2 0.950 0.967
OZ HZ 0.950 0.967
OXT HXT   0.967

Bond Angles for DAH

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
CA N H 109.5 111.0
CA N H2 109.5 111.0
N CA C 117.9 109.5
N CA CB 103.8 109.4
N CA HA 107.2 109.5
H N H2 109.4 111.0
C CA CB 107.2 109.5
C CA HA 103.7 109.5
CA C O 121.9 120.0
CA C OXT   120.0
CB CA HA 117.8 109.5
CA CB CG 109.5 109.5
CA CB HB2 109.5 109.5
CA CB HB3 109.5 109.5
O C OXT   120.0
C OXT HXT   117.0
CG CB HB2 109.5 109.4
CG CB HB3 109.5 109.4
CB CG CD1 118.0 119.9
CB CG CD2 123.4 119.9
HB2 CB HB3 109.5 109.5
CD1 CG CD2 118.5 120.2
CG CD1 CE1 119.9 120.1
CG CD1 HD1 120.0 119.9
CG CD2 CE2 122.8 120.0
CG CD2 HD2 118.6 120.0
CE1 CD1 HD1 120.1 119.9
CD1 CE1 CZ 119.3 120.0
CD1 CE1 HE1 120.3 120.0
CE2 CD2 HD2 118.6 120.0
CD2 CE2 CZ 119.0 119.8
CD2 CE2 OE2 121.7 120.1
CZ CE1 HE1 120.4 120.0
CE1 CZ CE2 120.5 119.9
CE1 CZ OZ 118.0 120.1
CZ CE2 OE2 119.3 120.1
CE2 CZ OZ 121.5 120.0
CE2 OE2 HE2 109.5 114.0
CZ OZ HZ 109.5 114.0

Torsion Angles for DAH

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
H N CA H2 240.0 236.0
C CA N CB 118.3 120.0
C CA N HA 243.7 240.0
N CA C O 330.6 340.0
N CA C OXT   160.0
CB CA N HA 125.4 120.0
N CA CB CG 271.0 295.0
N CA CB HB2 31.0 55.0
N CA CB HB3 151.0 175.0
CA N H H2 120.0 124.0
H N CA C 180.0 60.0
H N CA CB 61.7 300.0
H N CA HA 296.3 180.0
CA N H2 H 240.0 236.0
H2 N CA C 300.0 184.0
H2 N CA CB 181.7 64.0
H2 N CA HA 56.3 304.0
C CA N H 180.0 60.0
C CA N H2 300.0 184.0
N CA C CB 243.6 240.0
N CA C HA 118.2 120.0
CB CA C HA 234.6 240.0
C CA CB CG 145.6 175.0
C CA CB HB2 265.6 295.0
C CA CB HB3 25.6 55.0
O C CA OXT   180.0
CA C OXT HXT   180.0
CB CA N H 61.7 300.0
CB CA N H2 181.7 64.0
N CA CB C 125.4 120.0
N CA CB HA 241.8 240.0
C CA CB HA 116.3 120.0
CB CA C O 87.0 100.0
CB CA C OXT   280.0
CG CB CA HB2 240.0 240.0
CG CB CA HB3 120.0 120.0
CA CB CG CD1 146.3 90.0
CA CB CG CD2 326.7 269.8
HB2 CB CA HB3 240.0 240.0
HA CA N H 296.3 180.0
HA CA N H2 56.3 304.0
N CA HA C 234.6 240.0
N CA HA CB 116.4 119.9
C CA HA CB 241.8 240.0
HA CA C O 212.3 220.0
HA CA C OXT   40.0
HA CA CB CG 29.3 55.0
HA CA CB HB2 149.3 175.0
HA CA CB HB3 269.3 295.0
O C CA CB 87.0 100.0
O C CA HA 212.3 220.0
CA C O OXT   180.0
O C OXT HXT   360.0
OXT C CA CB   280.0
OXT C CA HA   40.0
CA C OXT O   180.0
CG CB CA HA 29.3 55.0
CA CB CG HB2 120.0 120.0
CA CB CG HB3 240.0 240.0
HB2 CB CG HB3 120.0 120.0
CD1 CG CB CD2 179.6 180.2
CB CG CD1 CE1 179.8 180.1
CB CG CD1 HD1 359.8 0.1
CB CG CD2 CE2 180.3 180.0
CB CG CD2 HD2 0.3 360.0
HB2 CB CA HA 149.3 175.0
CA CB HB2 CG 240.0 240.0
CA CB HB2 HB3 120.0 120.0
CG CB HB2 HB3 240.0 240.1
HB2 CB CG CD1 26.3 329.9
HB2 CB CG CD2 206.7 149.7
HB3 CB CA HA 269.3 295.0
CA CB HB3 CG 120.0 120.0
CA CB HB3 HB2 240.0 240.0
CG CB HB3 HB2 120.0 119.9
HB3 CB CG CD1 266.3 210.0
HB3 CB CG CD2 86.7 29.8
CD1 CG CB HB2 26.3 329.9
CD1 CG CB HB3 266.3 210.0
CB CG CD1 CD2 180.4 179.8
CD1 CG CD2 CE2 0.7 359.7
CD1 CG CD2 HD2 180.7 179.7
CE1 CD1 CG HD1 180.0 180.0
CG CD1 CE1 CZ 360.0 359.9
CG CD1 CE1 HE1 179.9 180.0
CD2 CG CB HB2 206.7 149.7
CD2 CG CB HB3 86.7 29.8
CB CG CD2 CD1 179.6 180.2
CD2 CG CD1 CE1 359.4 0.3
CD2 CG CD1 HD1 179.4 180.3
CE2 CD2 CG HD2 180.0 180.0
CG CD2 CE2 CZ 359.8 0.0
CG CD2 CE2 OE2 180.0 180.0
CE1 CD1 CG CD2 359.4 0.3
CG CD1 CE1 HD1 180.0 180.0
CZ CE1 CD1 HE1 180.0 179.9
CD1 CE1 CZ CE2 0.5 359.8
CD1 CE1 CZ OZ 180.0 180.0
HD1 CD1 CG CD2 179.4 180.3
CG CD1 HD1 CE1 180.0 180.0
HD1 CD1 CE1 CZ 180.0 179.9
HD1 CD1 CE1 HE1 360.0 360.0
CG CD2 CE2 HD2 180.0 180.0
CE1 CZ CE2 CD2 359.6 0.2
CZ CE2 CD2 OE2 179.8 180.0
CD2 CE2 CZ OZ 180.2 180.0
CD2 CE2 OE2 HE2 180.0 90.0
CG CD2 HD2 CE2 180.0 180.0
HD2 CD2 CE2 CZ 179.8 180.0
HD2 CD2 CE2 OE2 0.0 360.0
CZ CE1 CD1 HD1 180.0 179.9
CD1 CE1 CZ HE1 180.0 180.1
CD2 CE2 CZ CE1 359.6 0.2
CE1 CZ CE2 OE2 179.3 180.2
CE2 CZ CE1 OZ 180.6 179.8
CE1 CZ OZ HZ 180.0 90.1
HE1 CE1 CD1 HD1 360.0 360.0
CD1 CE1 HE1 CZ 180.0 179.9
HE1 CE1 CZ CE2 180.6 179.7
HE1 CE1 CZ OZ 0.0 359.9
CZ CE2 CD2 HD2 179.8 180.0
CD2 CE2 CZ OE2 180.2 180.0
CE2 CZ CE1 HE1 180.6 179.7
CE1 CZ CE2 OZ 179.4 180.2
CZ CE2 OE2 HE2 0.2 270.0
CE2 CZ OZ HZ 359.4 270.2
OE2 CE2 CD2 HD2 0.0 360.0
CD2 CE2 OE2 CZ 179.8 180.0
OE2 CE2 CZ OZ 359.9 0.1
OZ CZ CE1 HE1 0.0 359.9
CE1 CZ OZ CE2 180.6 179.8
OZ CZ CE2 OE2 359.9 0.1