PDB Chemical Component DAE

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for DAE

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
BE F1 1.530  
BE F2 1.510  
BE F3 1.520  
BE OB3 1.607  
PB OB1 1.490  
PB OB2 1.517  
PB OB3 1.606  
PB OA3 1.589  
OB2 HOB2 0.949  
OA3 PA 1.600  
PA OA1 1.533  
PA OA2 1.486  
PA OE2 1.617  
OA1 HOA2 0.950  
OE2 CA1 1.434  
NA3 CA2 1.470  
NA3 C1 1.447  
NA3 HNA1 1.021  
CA2 CA1 1.518  
CA2 HA21 1.115  
CA2 HA22 1.114  
CA1 HA11 1.115  
CA1 HA12 1.115  
C1 C6 1.400  
C1 C2 1.408  
C6 C5 1.396  
C6 H6 1.103  
C5 C4 1.401  
C5 H5 1.102  
C4 C3 1.392  
C4 N4 1.492  
C3 C2 1.395  
C3 H3 1.103  
C2 N2 1.499  
N4 O4A 1.224  
N4 O4B 1.238  
N2 O2A 1.250  
N2 O2B 1.249  

Bond Angles for DAE

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
F1 BE F2 111.2  
F1 BE F3 112.6  
F1 BE OB3 108.1  
F2 BE F3 109.1  
F2 BE OB3 108.6  
F3 BE OB3 107.1  
BE OB3 PB 130.7  
OB1 PB OB2 113.4  
OB1 PB OB3 113.8  
OB1 PB OA3 107.8  
OB2 PB OB3 103.9  
OB2 PB OA3 111.5  
PB OB2 HOB2 113.4  
OB3 PB OA3 106.1  
PB OA3 PA 132.2  
OA3 PA OA1 109.7  
OA3 PA OA2 111.4  
OA3 PA OE2 103.0  
OA1 PA OA2 107.6  
OA1 PA OE2 113.8  
PA OA1 HOA2 109.7  
OA2 PA OE2 111.5  
PA OE2 CA1 118.0  
OE2 CA1 CA2 111.5  
OE2 CA1 HA11 111.4  
OE2 CA1 HA12 111.4  
CA2 NA3 C1 113.9  
CA2 NA3 HNA1 110.6  
NA3 CA2 CA1 113.8  
NA3 CA2 HA21 110.6  
NA3 CA2 HA22 110.6  
C1 NA3 HNA1 110.6  
NA3 C1 C6 120.3  
NA3 C1 C2 120.4  
CA1 CA2 HA21 110.6  
CA1 CA2 HA22 110.6  
CA2 CA1 HA11 111.4  
CA2 CA1 HA12 111.5  
HA21 CA2 HA22 99.7  
HA11 CA1 HA12 99.0  
C6 C1 C2 119.3  
C1 C6 C5 120.6  
C1 C6 H6 119.8  
C1 C2 C3 119.8  
C1 C2 N2 120.8  
C5 C6 H6 119.6  
C6 C5 C4 119.8  
C6 C5 H5 119.9  
C4 C5 H5 120.3  
C5 C4 C3 119.8  
C5 C4 N4 121.3  
C3 C4 N4 118.9  
C4 C3 C2 120.7  
C4 C3 H3 119.6  
C4 N4 O4A 120.3  
C4 N4 O4B 122.2  
C2 C3 H3 119.7  
C3 C2 N2 119.4  
C2 N2 O2A 120.3  
C2 N2 O2B 120.0  
O4A N4 O4B 117.5  
O2A N2 O2B 119.7  

Torsion Angles for DAE

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
F2 BE F1 F3 237.2  
F2 BE F1 OB3 119.1  
F3 BE F1 OB3 241.9  
F1 BE OB3 PB 77.7  
F1 BE F2 F3 124.8  
F1 BE F2 OB3 241.2  
F3 BE F2 OB3 116.4  
F2 BE OB3 PB 317.0  
F1 BE F3 F2 236.1  
F1 BE F3 OB3 118.6  
F2 BE F3 OB3 242.6  
F3 BE OB3 PB 199.2  
F1 BE OB3 F2 120.7  
F1 BE OB3 F3 238.4  
F2 BE OB3 F3 117.7  
OB1 PB OB3 BE 266.0  
OB2 PB OB3 BE 29.9  
BE OB3 PB OA3 147.6  
BE OB3 PB OB1 266.0  
OB2 PB OB1 OB3 241.4  
OB2 PB OB1 OA3 124.0  
OB1 PB OB2 HOB2 180.0  
OB3 PB OB1 OA3 242.6  
OB1 PB OA3 PA 129.1  
BE OB3 PB OB2 29.9  
OB1 PB OB2 OB3 124.1  
OB1 PB OB2 OA3 238.0  
OB3 PB OB2 OA3 113.9  
OB2 PB OA3 PA 4.0  
OB1 PB OB3 OB2 236.1  
OB1 PB OB3 OA3 118.4  
OB2 PB OB3 OA3 242.3  
OB3 PB OB2 HOB2 55.9  
OB3 PB OA3 PA 251.4  
OB1 PB OA3 OB2 125.1  
OB1 PB OA3 OB3 237.7  
OB2 PB OA3 OB3 112.6  
OA3 PB OB2 HOB2 302.0  
PB OA3 PA OA1 299.6  
PB OA3 PA OA2 58.6  
PB OA3 PA OE2 178.1  
HOB2 OB2 PB OB3 55.9  
HOB2 OB2 PB OA3 302.0  
OA1 PA OA3 OA2 241.0  
OA1 PA OA3 OE2 121.4  
OA3 PA OA1 HOA2 180.0  
OA2 PA OA3 OE2 240.4  
OA3 PA OE2 CA1 215.8  
OA3 PA OA1 OA2 121.3  
OA3 PA OA1 OE2 245.3  
OA2 PA OA1 OE2 124.0  
OA1 PA OE2 CA1 97.2  
OA3 PA OA2 OA1 239.8  
OA3 PA OA2 OE2 114.4  
OA1 PA OA2 OE2 234.6  
OA2 PA OA1 HOA2 58.7  
OA2 PA OE2 CA1 335.3  
OA3 PA OE2 OA1 118.6  
OA3 PA OE2 OA2 240.5  
OA1 PA OE2 OA2 121.9  
OE2 PA OA1 HOA2 294.7  
PA OE2 CA1 CA2 162.9  
PA OE2 CA1 HA11 288.1  
PA OE2 CA1 HA12 37.6  
HOA2 OA1 PA OA2 58.7  
HOA2 OA1 PA OE2 294.7  
NA3 CA2 CA1 OE2 79.6  
OE2 CA1 CA2 HA21 314.3  
OE2 CA1 CA2 HA22 204.8  
CA2 CA1 OE2 HA11 234.8  
CA2 CA1 OE2 HA12 125.3  
HA11 CA1 OE2 HA12 250.5  
OE2 CA1 CA2 NA3 79.6  
C1 NA3 CA2 HNA1 125.3  
CA2 NA3 C1 C6 5.4  
CA2 NA3 C1 C2 185.1  
CA1 CA2 NA3 HA21 234.7  
CA1 CA2 NA3 HA22 125.2  
NA3 CA2 CA1 HA11 314.4  
NA3 CA2 CA1 HA12 204.8  
HA21 CA2 NA3 HA22 250.5  
CA2 NA3 C1 HNA1 234.7  
C1 NA3 CA2 CA1 134.2  
C1 NA3 CA2 HA21 259.5  
C1 NA3 CA2 HA22 9.0  
C6 C1 NA3 C2 180.3  
NA3 C1 C6 C5 180.6  
NA3 C1 C6 H6 0.6  
NA3 C1 C2 C3 180.1  
NA3 C1 C2 N2 359.9  
CA2 NA3 HNA1 C1 127.1  
HNA1 NA3 CA2 CA1 8.9  
HNA1 NA3 CA2 HA21 134.2  
HNA1 NA3 CA2 HA22 243.7  
HNA1 NA3 C1 C6 130.7  
HNA1 NA3 C1 C2 310.4  
OE2 CA1 CA2 HA11 125.2  
OE2 CA1 CA2 HA12 234.8  
CA1 CA2 NA3 C1 134.2  
CA1 CA2 NA3 HNA1 8.9  
NA3 CA2 CA1 HA21 125.3  
NA3 CA2 CA1 HA22 234.8  
HA21 CA2 CA1 HA22 109.5  
HA11 CA1 CA2 HA12 109.6  
HA21 CA2 NA3 C1 259.5  
HA21 CA2 NA3 HNA1 134.2  
NA3 CA2 HA21 CA1 233.0  
NA3 CA2 HA21 HA22 116.5  
CA1 CA2 HA21 HA22 243.5  
HA21 CA2 CA1 HA11 189.1  
HA21 CA2 CA1 HA12 79.6  
HA22 CA2 NA3 C1 9.0  
HA22 CA2 NA3 HNA1 243.7  
NA3 CA2 HA22 CA1 127.0  
NA3 CA2 HA22 HA21 243.5  
CA1 CA2 HA22 HA21 116.5  
HA22 CA2 CA1 HA11 79.6  
HA22 CA2 CA1 HA12 330.1  
OE2 CA1 HA11 CA2 234.7  
OE2 CA1 HA11 HA12 117.3  
HA11 CA1 CA2 HA21 189.1  
HA11 CA1 CA2 HA22 79.6  
CA2 CA1 HA11 HA12 242.6  
OE2 CA1 HA12 CA2 125.3  
OE2 CA1 HA12 HA11 242.7  
HA12 CA1 CA2 HA21 79.6  
HA12 CA1 CA2 HA22 330.1  
CA2 CA1 HA12 HA11 117.4  
C6 C1 NA3 HNA1 130.7  
NA3 C1 C6 C2 179.7  
C6 C1 C2 C3 359.8  
C6 C1 C2 N2 179.6  
C5 C6 C1 H6 180.0  
C1 C6 C5 C4 359.0  
C1 C6 C5 H5 178.9  
C2 C1 NA3 HNA1 310.4  
NA3 C1 C2 C6 180.3  
C2 C1 C6 C5 0.9  
C2 C1 C6 H6 180.9  
C4 C3 C2 C1 359.6  
C1 C2 C3 H3 179.6  
C3 C2 C1 N2 180.2  
C1 C2 N2 O2A 0.8  
C1 C2 N2 O2B 180.6  
C5 C6 C1 C2 0.9  
C1 C6 C5 H6 180.0  
C4 C5 C6 H5 180.0  
C6 C5 C4 C3 0.4  
C6 C5 C4 N4 180.1  
H6 C6 C1 C2 180.9  
C1 C6 H6 C5 180.0  
H6 C6 C5 C4 179.0  
H6 C6 C5 H5 358.9  
C4 C5 C6 H6 179.0  
C6 C5 C4 H5 180.0  
C3 C4 C5 N4 180.4  
C5 C4 C3 C2 0.3  
C5 C4 C3 H3 180.3  
C5 C4 N4 O4A 180.3  
C5 C4 N4 O4B 0.6  
H5 C5 C6 H6 358.9  
C6 C5 H5 C4 180.0  
H5 C5 C4 C3 180.5  
H5 C5 C4 N4 0.1  
C1 C2 C3 C4 359.6  
C3 C4 C5 H5 180.5  
C5 C4 C3 N4 179.6  
C3 C4 N4 O4A 360.0  
C3 C4 N4 O4B 180.3  
C2 C3 C4 H3 180.0  
C4 C3 C2 N2 179.8  
N4 C4 C5 H5 0.1  
C5 C4 N4 C3 180.4  
N4 C4 C3 C2 180.6  
N4 C4 C3 H3 0.6  
O4A N4 C4 O4B 179.7  
C1 C2 C3 N2 179.8  
C2 C3 C4 N4 180.6  
C4 C3 C2 H3 180.0  
C3 C2 N2 O2A 180.6  
C3 C2 N2 O2B 0.4  
H3 C3 C4 N4 0.6  
C4 C3 H3 C2 180.0  
H3 C3 C2 N2 359.8  
C1 C2 N2 C3 180.2  
N2 C2 C3 H3 359.8  
O2A N2 C2 O2B 180.2  
C4 N4 O4A O4B 180.3  
C4 N4 O4B O4A 179.7  
C2 N2 O2A O2B 179.8  
C2 N2 O2B O2A 180.2