PDB Chemical Component D7A
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for D7A
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
CAA |
OAQ |
1.422 |
1.428 |
CAL |
CAG |
1.382 |
1.383 |
CAL |
CAW |
1.382 |
1.386 |
CAG |
CAT |
1.397 |
1.383 |
CAN |
NAP |
1.493 |
1.465 |
CAN |
CAO |
1.520 |
1.530 |
OAQ |
CAW |
1.329 |
1.360 |
CAW |
CAX |
1.397 |
1.391 |
NAP |
CAS |
1.334 |
1.347 |
OAD |
CAS |
1.259 |
1.215 |
CAS |
CAU |
1.423 |
1.479 |
CAT |
CAO |
1.412 |
1.507 |
CAT |
CAM |
1.385 |
1.382 |
CAX |
CAM |
1.391 |
1.385 |
CAX |
OAR |
1.334 |
1.360 |
CAU |
CAH |
1.399 |
1.396 |
CAU |
CAI |
1.378 |
1.395 |
CAH |
CAJ |
1.422 |
1.380 |
CAI |
CAK |
1.395 |
1.380 |
CAB |
OAR |
1.431 |
1.429 |
CAJ |
CAV |
1.398 |
1.384 |
CAK |
CAV |
1.375 |
1.383 |
CAV |
SAY |
1.769 |
1.762 |
NAC |
SAY |
1.605 |
1.656 |
OAF |
SAY |
1.453 |
1.421 |
SAY |
OAE |
1.475 |
1.421 |
CAB |
H1 |
1.100 |
1.090 |
CAB |
H2 |
1.100 |
1.090 |
CAB |
H3 |
1.100 |
1.090 |
CAM |
H4 |
1.080 |
1.080 |
CAA |
H5 |
1.100 |
1.090 |
CAA |
H6 |
1.100 |
1.090 |
CAA |
H7 |
1.100 |
1.089 |
CAL |
H8 |
1.080 |
1.080 |
CAG |
H9 |
1.080 |
1.080 |
CAO |
H10 |
1.099 |
1.090 |
CAO |
H11 |
1.100 |
1.090 |
CAN |
H12 |
1.100 |
1.090 |
CAN |
H13 |
1.100 |
1.090 |
NAP |
H14 |
1.000 |
0.970 |
CAI |
H15 |
1.080 |
1.080 |
CAK |
H16 |
1.080 |
1.080 |
CAH |
H17 |
1.080 |
1.081 |
CAJ |
H18 |
1.080 |
1.079 |
NAC |
H19 |
1.000 |
0.970 |
NAC |
H20 |
1.000 |
0.970 |
Bond Angles for D7A
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
CAL |
CAG |
CAT |
123.6 |
120.1 |
CAG |
CAL |
H8 |
120.2 |
120.0 |
CAL |
CAG |
H9 |
118.2 |
119.9 |
CAG |
CAT |
CAO |
121.3 |
119.9 |
CAT |
CAG |
H9 |
118.2 |
119.9 |
CAN |
NAP |
CAS |
120.3 |
120.0 |
NAP |
CAN |
H12 |
109.4 |
109.5 |
NAP |
CAN |
H13 |
109.4 |
109.5 |
CAN |
NAP |
H14 |
119.8 |
119.9 |
CAN |
CAO |
H10 |
108.2 |
109.5 |
CAN |
CAO |
H11 |
108.2 |
109.4 |
NAP |
CAS |
CAU |
121.3 |
119.9 |
CAS |
NAP |
H14 |
119.8 |
120.1 |
OAD |
CAS |
CAU |
119.5 |
120.0 |
CAS |
CAU |
CAH |
121.7 |
120.1 |
CAS |
CAU |
CAI |
119.8 |
120.2 |
CAT |
CAO |
H10 |
108.2 |
109.5 |
CAT |
CAO |
H11 |
108.2 |
109.5 |
CAT |
CAM |
H4 |
120.0 |
120.0 |
CAX |
CAM |
H4 |
120.0 |
120.0 |
CAI |
CAU |
CAH |
118.4 |
119.7 |
CAU |
CAH |
CAJ |
121.1 |
119.9 |
CAU |
CAH |
H17 |
119.4 |
120.1 |
CAU |
CAI |
CAK |
120.5 |
119.9 |
CAU |
CAI |
H15 |
119.8 |
120.1 |
CAH |
CAJ |
CAV |
119.0 |
120.1 |
CAJ |
CAH |
H17 |
119.5 |
120.0 |
CAH |
CAJ |
H18 |
120.5 |
119.9 |
CAI |
CAK |
CAV |
122.0 |
120.1 |
CAK |
CAI |
H15 |
119.7 |
120.0 |
CAI |
CAK |
H16 |
119.0 |
119.9 |
OAR |
CAB |
H1 |
109.5 |
109.5 |
OAR |
CAB |
H2 |
109.4 |
109.5 |
OAR |
CAB |
H3 |
109.5 |
109.5 |
CAK |
CAV |
CAJ |
119.0 |
120.3 |
CAJ |
CAV |
SAY |
119.3 |
119.8 |
CAV |
CAJ |
H18 |
120.5 |
120.0 |
CAK |
CAV |
SAY |
121.7 |
119.9 |
CAV |
CAK |
H16 |
119.0 |
119.9 |
CAV |
SAY |
OAE |
105.0 |
106.4 |
H1 |
CAB |
H2 |
109.4 |
109.4 |
H1 |
CAB |
H3 |
109.5 |
109.4 |
H2 |
CAB |
H3 |
109.5 |
109.5 |
H5 |
CAA |
H6 |
109.5 |
109.5 |
H5 |
CAA |
H7 |
109.5 |
109.5 |
H6 |
CAA |
H7 |
109.4 |
109.4 |
H10 |
CAO |
H11 |
109.5 |
109.5 |
H12 |
CAN |
H13 |
109.5 |
109.5 |
H19 |
NAC |
H20 |
109.5 |
120.0 |
Torsion Angles for D7A
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
CAL |
CAG |
CAT |
CAO |
173.9 |
180.0 |
CAT |
CAG |
CAL |
H9 |
180.0 |
179.8 |
CAT |
CAG |
CAL |
H8 |
180.8 |
180.0 |
CAL |
CAG |
CAT |
H9 |
180.0 |
180.2 |
CAG |
CAT |
CAO |
H10 |
273.4 |
210.0 |
CAG |
CAT |
CAO |
H11 |
154.9 |
330.0 |
CAG |
CAT |
CAM |
H4 |
180.9 |
179.5 |
NAP |
CAN |
CAO |
H10 |
310.9 |
60.0 |
NAP |
CAN |
CAO |
H11 |
69.4 |
300.0 |
CAN |
NAP |
CAS |
CAU |
186.5 |
180.0 |
CAS |
NAP |
CAN |
H14 |
180.0 |
180.0 |
H12 |
CAN |
NAP |
H13 |
240.1 |
120.0 |
CAT |
CAO |
CAN |
H10 |
239.2 |
120.0 |
CAT |
CAO |
CAN |
H11 |
120.8 |
240.0 |
H10 |
CAO |
CAN |
H11 |
241.5 |
120.0 |
CAW |
CAX |
CAM |
H4 |
180.6 |
180.3 |
CAS |
NAP |
CAN |
H12 |
207.5 |
60.0 |
CAS |
NAP |
CAN |
H13 |
327.4 |
300.0 |
CAN |
NAP |
CAS |
H14 |
180.0 |
180.0 |
OAD |
CAS |
NAP |
CAU |
177.3 |
180.0 |
NAP |
CAS |
CAU |
CAH |
359.4 |
180.0 |
NAP |
CAS |
CAU |
CAI |
178.0 |
0.3 |
NAP |
CAS |
OAD |
CAU |
182.7 |
180.0 |
OAD |
CAS |
NAP |
H14 |
183.8 |
180.0 |
OAD |
CAS |
CAU |
CAH |
182.1 |
360.0 |
OAD |
CAS |
CAU |
CAI |
0.7 |
180.2 |
CAU |
CAS |
NAP |
H14 |
6.5 |
360.0 |
CAI |
CAU |
CAS |
CAH |
178.6 |
180.2 |
CAS |
CAU |
CAH |
CAJ |
176.3 |
180.0 |
CAS |
CAU |
CAH |
H17 |
356.4 |
0.0 |
CAS |
CAU |
CAI |
CAK |
183.9 |
180.0 |
CAS |
CAU |
CAI |
H15 |
3.9 |
0.0 |
CAO |
CAT |
CAG |
H9 |
353.9 |
359.8 |
CAN |
CAO |
CAT |
H10 |
120.8 |
240.0 |
CAN |
CAO |
CAT |
H11 |
239.2 |
119.9 |
CAO |
CAT |
CAM |
H4 |
5.4 |
0.0 |
H10 |
CAO |
CAT |
H11 |
118.5 |
239.9 |
CAX |
CAM |
CAT |
H4 |
180.0 |
180.0 |
CAT |
CAM |
CAX |
H4 |
180.0 |
180.0 |
CAX |
OAR |
CAB |
H1 |
180.0 |
300.0 |
CAX |
OAR |
CAB |
H2 |
300.0 |
60.0 |
CAX |
OAR |
CAB |
H3 |
60.0 |
180.0 |
CAS |
CAU |
CAH |
CAI |
178.6 |
180.2 |
CAH |
CAU |
CAI |
CAK |
2.5 |
0.2 |
CAH |
CAU |
CAI |
H15 |
182.5 |
180.3 |
CAU |
CAH |
CAJ |
CAV |
0.5 |
359.9 |
CAJ |
CAH |
CAU |
H17 |
180.0 |
180.0 |
CAU |
CAH |
CAJ |
H18 |
180.5 |
180.0 |
CAS |
CAU |
CAI |
CAH |
181.4 |
179.8 |
CAI |
CAU |
CAH |
CAJ |
357.7 |
359.8 |
CAI |
CAU |
CAH |
H17 |
177.7 |
179.8 |
CAU |
CAI |
CAK |
CAV |
359.0 |
0.1 |
CAK |
CAI |
CAU |
H15 |
180.0 |
179.9 |
CAU |
CAI |
CAK |
H16 |
179.0 |
180.1 |
CAU |
CAH |
CAJ |
H17 |
180.0 |
180.0 |
CAK |
CAV |
CAJ |
CAH |
1.0 |
0.3 |
CAH |
CAJ |
CAV |
SAY |
183.0 |
180.0 |
CAV |
CAJ |
CAH |
H18 |
180.0 |
179.9 |
CAK |
CAI |
CAU |
CAH |
2.5 |
0.2 |
CAU |
CAI |
CAK |
H15 |
180.0 |
180.1 |
CAI |
CAK |
CAV |
CAJ |
359.2 |
359.7 |
CAI |
CAK |
CAV |
SAY |
177.2 |
180.0 |
CAV |
CAK |
CAI |
H16 |
180.0 |
180.0 |
H1 |
CAB |
OAR |
H2 |
240.0 |
240.0 |
H1 |
CAB |
OAR |
H3 |
120.0 |
120.0 |
H2 |
CAB |
OAR |
H3 |
240.0 |
239.9 |
CAV |
CAJ |
CAH |
H17 |
180.5 |
180.0 |
CAH |
CAJ |
CAV |
H18 |
180.0 |
180.1 |
CAK |
CAV |
CAJ |
SAY |
178.1 |
180.3 |
CAJ |
CAV |
CAK |
H16 |
179.2 |
179.7 |
CAJ |
CAV |
SAY |
OAE |
70.8 |
23.8 |
CAH |
CAJ |
CAV |
CAK |
1.0 |
0.3 |
CAV |
CAK |
CAI |
H15 |
179.0 |
180.0 |
CAI |
CAK |
CAV |
H16 |
180.0 |
180.0 |
CAJ |
CAV |
CAK |
SAY |
182.0 |
179.7 |
CAK |
CAV |
CAJ |
H18 |
181.0 |
180.3 |
CAK |
CAV |
SAY |
OAE |
252.8 |
203.5 |
CAK |
CAV |
SAY |
CAJ |
182.0 |
179.7 |
SAY |
CAV |
CAJ |
H18 |
3.0 |
360.0 |
SAY |
CAV |
CAK |
H16 |
357.2 |
360.0 |
OAR |
CAB |
H1 |
H2 |
120.0 |
120.0 |
OAR |
CAB |
H1 |
H3 |
240.0 |
240.0 |
H2 |
CAB |
H1 |
H3 |
120.0 |
120.0 |
OAR |
CAB |
H2 |
H1 |
240.0 |
240.0 |
OAR |
CAB |
H2 |
H3 |
120.0 |
120.1 |
H1 |
CAB |
H2 |
H3 |
240.0 |
240.0 |
OAR |
CAB |
H3 |
H1 |
120.0 |
120.0 |
OAR |
CAB |
H3 |
H2 |
240.0 |
239.9 |
H1 |
CAB |
H3 |
H2 |
120.0 |
119.9 |
H6 |
CAA |
H5 |
H7 |
120.0 |
120.0 |
H5 |
CAA |
H6 |
H7 |
240.0 |
240.0 |
H5 |
CAA |
H7 |
H6 |
120.0 |
120.0 |
H8 |
CAL |
CAG |
CAT |
180.8 |
180.0 |
H8 |
CAL |
CAG |
H9 |
0.8 |
0.3 |
CAL |
CAG |
H9 |
CAT |
180.0 |
179.8 |
H9 |
CAG |
CAL |
H8 |
0.8 |
0.3 |
H9 |
CAG |
CAT |
CAO |
353.9 |
359.8 |
CAN |
CAO |
H10 |
H11 |
117.7 |
240.0 |
CAT |
CAO |
H10 |
H11 |
242.4 |
120.1 |
CAN |
CAO |
H11 |
H10 |
242.3 |
120.0 |
CAT |
CAO |
H11 |
H10 |
117.7 |
240.0 |
H12 |
CAN |
NAP |
CAS |
207.5 |
60.0 |
NAP |
CAN |
H12 |
H13 |
119.9 |
240.0 |
H12 |
CAN |
NAP |
H14 |
27.5 |
240.0 |
H12 |
CAN |
CAO |
H10 |
190.8 |
180.0 |
H12 |
CAN |
CAO |
H11 |
309.3 |
60.0 |
H13 |
CAN |
NAP |
CAS |
327.4 |
300.0 |
NAP |
CAN |
H13 |
H12 |
240.1 |
120.0 |
H13 |
CAN |
NAP |
H14 |
147.4 |
120.0 |
H13 |
CAN |
CAO |
H10 |
70.9 |
300.0 |
H13 |
CAN |
CAO |
H11 |
189.4 |
180.0 |
CAN |
NAP |
H14 |
CAS |
180.0 |
180.0 |
H14 |
NAP |
CAN |
H12 |
27.5 |
240.0 |
H14 |
NAP |
CAN |
H13 |
147.4 |
120.0 |
H14 |
NAP |
CAS |
CAU |
6.5 |
360.0 |
H15 |
CAI |
CAU |
CAH |
182.5 |
180.3 |
CAU |
CAI |
H15 |
CAK |
180.0 |
179.9 |
H15 |
CAI |
CAK |
CAV |
179.0 |
180.0 |
H15 |
CAI |
CAK |
H16 |
359.0 |
0.0 |
CAI |
CAK |
H16 |
CAV |
180.0 |
180.0 |
H16 |
CAK |
CAI |
H15 |
359.0 |
0.0 |
H16 |
CAK |
CAV |
CAJ |
179.2 |
179.7 |
H16 |
CAK |
CAV |
SAY |
357.2 |
360.0 |
CAU |
CAH |
H17 |
CAJ |
180.0 |
180.0 |
H17 |
CAH |
CAJ |
CAV |
180.5 |
180.0 |
H17 |
CAH |
CAJ |
H18 |
0.5 |
0.0 |
CAH |
CAJ |
H18 |
CAV |
180.0 |
179.9 |
H18 |
CAJ |
CAH |
H17 |
0.5 |
0.0 |
H18 |
CAJ |
CAV |
SAY |
3.0 |
360.0 |