PDB Chemical Component D2X

Ideal Model

Chemical Description

Name 3-[(4-hydroxy-2-methylpyrimidin-5-yl)methyl]-5-(2-{[(R)-hydroxy(phosphonooxy)phosphoryl]oxy}ethyl)-4-methyl-1,3-thiazol-3-ium
Formula C12 H18 N3 O8 P2 S
Formal charge 1
Molecular weight 426.299 g/mol
Component type NON-POLYMER

Chemical features

Atom count 44
Chiral atom count 1
Chiral atoms PAU
Bond count 45
Aromatic bond count 11

Chemical Identifiers

Systematic name (ACDLabs) 3-[(4-hydroxy-2-methylpyrimidin-5-yl)methyl]-5-(2-{[(R)-hydroxy(phosphonooxy)phosphoryl]oxy}ethyl)-4-methyl-1,3-thiazol-3-ium
Systematic name (OpenEye OEToolkits) 2-[3-[(4-hydroxy-2-methyl-pyrimidin-5-yl)methyl]-4-methyl-1,3-thiazol-3-ium-5-yl]ethyl phosphono hydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) Cc1ncc(C[n+]2csc(CCO[P@](O)(=O)O[P](O)(O)=O)c2C)c(O)n1
SMILES (CACTVS) Cc1ncc(C[n+]2csc(CCO[P](O)(=O)O[P](O)(O)=O)c2C)c(O)n1
Stereo SMILES (OpenEye) Cc1c(sc[n+]1Cc2cnc(nc2O)C)CCO[P@@](=O)(O)OP(=O)(O)O
InChI descriptor InChI=1S/C12H17N3O8P2S/c1-8-11(3-4-22-25(20,21)23-24(17,18)19)26-7-15(8)6-10-5-13-9(2)14-12(10)16/h5,7H,3-4,6H2,1-2H3,(H3-,13,14,16,17,18,19,20,21)/p+1
InChIKey descriptor FBFAORFKQFQJGN-UHFFFAOYSA-O

Status Information

Last modified 2011-06-04
Created 2008-05-20
Release status REL
Model PDB code 3D2X
Processing site RCSB