PDB Chemical Component D1L

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for D1L

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
O1A	C1	1.232	1.342
O1A	H1A	0.950	0.968
C1	O1B	1.230	1.207
C1	C2	1.529	1.507
C2	C2A	1.531	1.529
C2	O2	1.436	1.428
C2	H2	1.115	1.090
C2A	H2A1	1.116	1.090
C2A	H2A2	1.115	1.090
C2A	H2A3	1.115	1.090
O2	C3	1.363	1.360
C3	C4	1.391	1.387
C3	C6	1.393	1.386
C4	C5	1.393	1.381
C4	H4	1.103	1.080
C5	C8	1.392	1.386
C5	H5	1.102	1.080
C6	C7	1.393	1.381
C6	H6	1.103	1.081
C7	C8	1.392	1.386
C7	H7	1.102	1.080
C8	O8	1.362	1.360
O8	C9	1.364	1.358
C9	C10	1.392	1.387
C9	C14	1.393	1.389
C10	C11	1.394	1.381
C10	H10	1.103	1.079
C11	C12	1.391	1.384
C11	H11	1.103	1.080
C12	CL12	1.730	1.737
C12	C13	1.391	1.383
C13	C14	1.390	1.382
C13	H13	1.103	1.080
C14	CL14	1.729	1.736

Bond Angles for D1L

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C1	O1A	H1A	120.1	120.0
O1A	C1	O1B	120.0	120.0
O1A	C1	C2	120.2	120.0
O1B	C1	C2	119.7	120.1
C1	C2	C2A	109.6	109.5
C1	C2	O2	107.7	109.5
C1	C2	H2	110.1	109.5
C2A	C2	O2	109.2	109.5
C2A	C2	H2	110.1	109.4
C2	C2A	H2A1	109.6	109.5
C2	C2A	H2A2	112.2	109.5
C2	C2A	H2A3	112.2	109.5
O2	C2	H2	110.1	109.5
C2	O2	C3	114.9	106.8
H2A1	C2A	H2A2	112.1	109.5
H2A1	C2A	H2A3	112.2	109.4
H2A2	C2A	H2A3	98.2	109.5
O2	C3	C4	118.3	120.0
O2	C3	C6	122.1	120.0
C4	C3	C6	119.4	120.0
C3	C4	C5	120.6	120.0
C3	C4	H4	119.7	120.0
C3	C6	C7	120.1	120.0
C3	C6	H6	119.9	120.0
C5	C4	H4	119.7	120.0
C4	C5	C8	119.9	120.0
C4	C5	H5	120.1	119.9
C8	C5	H5	120.1	120.1
C5	C8	C7	119.7	120.0
C5	C8	O8	120.6	120.0
C7	C6	H6	119.9	120.0
C6	C7	C8	120.3	120.0
C6	C7	H7	119.9	120.0
C8	C7	H7	119.9	120.1
C7	C8	O8	119.3	120.0
C8	O8	C9	117.6	106.8
O8	C9	C10	122.9	120.0
O8	C9	C14	117.9	120.1
C10	C9	C14	119.2	119.9
C9	C10	C11	120.5	119.9
C9	C10	H10	119.8	120.0
C9	C14	C13	120.6	120.0
C9	C14	CL14	120.2	120.0
C11	C10	H10	119.7	120.0
C10	C11	C12	119.9	120.1
C10	C11	H11	120.0	120.0
C12	C11	H11	120.1	119.9
C11	C12	CL12	120.8	119.9
C11	C12	C13	119.9	120.1
CL12	C12	C13	119.2	119.9
C12	C13	C14	119.9	120.0
C12	C13	H13	120.1	120.0
C14	C13	H13	120.0	120.0
C13	C14	CL14	119.2	120.0

Torsion Angles for D1L

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O1B	C1	O1A	C2	180.7	179.9
O1A	C1	C2	C2A	107.8	60.0
O1A	C1	C2	O2	226.6	180.0
O1A	C1	C2	H2	346.6	300.0
H1A	O1A	C1	O1B	180.0	359.9
H1A	O1A	C1	C2	359.3	180.0
O1B	C1	O1A	H1A	180.0	359.9
O1A	C1	O1B	C2	179.3	180.1
O1B	C1	C2	C2A	287.2	240.0
O1B	C1	C2	O2	45.9	0.1
O1B	C1	C2	H2	165.9	120.0
C2	C1	O1A	H1A	359.3	180.0
O1A	C1	C2	O1B	180.7	179.9
C2A	C2	C1	O2	241.3	240.0
C2A	C2	C1	H2	121.2	120.0
C1	C2	C2A	H2A1	180.0	60.0
C1	C2	C2A	H2A2	54.7	180.0
C1	C2	C2A	H2A3	305.2	300.0
O2	C2	C1	H2	240.0	240.0
C1	C2	O2	C3	106.9	145.1
C1	C2	C2A	O2	117.8	120.0
C1	C2	C2A	H2	238.8	240.0
O2	C2	C2A	H2	121.0	120.0
C2A	C2	O2	C3	225.8	265.2
H2A1	C2A	C2	H2A2	125.3	240.0
H2A1	C2A	C2	H2A3	234.7	119.9
H2A2	C2A	C2	H2A3	109.5	240.0
C1	C2	O2	C2A	241.1	240.0
C1	C2	O2	H2	120.0	120.0
C2A	C2	O2	H2	239.0	240.0
O2	C2	C2A	H2A1	62.2	300.0
O2	C2	C2A	H2A2	297.0	60.0
O2	C2	C2A	H2A3	187.5	180.0
C2	O2	C3	C4	156.8	95.0
C2	O2	C3	C6	333.5	274.7
C1	C2	H2	C2A	120.9	120.0
C1	C2	H2	O2	241.4	240.0
C2A	C2	H2	O2	120.5	120.0
H2	C2	C2A	H2A1	301.2	180.0
H2	C2	C2A	H2A2	176.0	300.0
H2	C2	C2A	H2A3	66.5	60.0
H2	C2	O2	C3	346.8	25.1
H2A1	C2A	C2	O2	62.2	300.0
H2A1	C2A	C2	H2	301.2	180.0
C2	C2A	H2A1	H2A2	234.7	120.0
C2	C2A	H2A1	H2A3	125.3	240.0
H2A2	C2A	H2A1	H2A3	250.5	120.0
H2A2	C2A	C2	O2	297.0	60.0
H2A2	C2A	C2	H2	176.0	300.0
C2	C2A	H2A2	H2A1	123.8	239.9
C2	C2A	H2A2	H2A3	241.9	120.0
H2A1	C2A	H2A2	H2A3	118.1	240.1
H2A3	C2A	C2	O2	187.5	180.0
H2A3	C2A	C2	H2	66.5	60.0
C2	C2A	H2A3	H2A1	236.2	120.0
C2	C2A	H2A3	H2A2	118.1	240.0
H2A1	C2A	H2A3	H2A2	241.9	120.0
C3	O2	C2	H2	346.8	25.1
C4	C3	O2	C6	183.3	180.3
O2	C3	C4	C5	176.3	179.9
O2	C3	C4	H4	356.2	360.0
O2	C3	C6	C7	183.6	179.8
O2	C3	C6	H6	3.6	0.3
O2	C3	C4	C6	176.8	179.7
C4	C3	C6	C7	0.3	359.5
C4	C3	C6	H6	180.3	180.0
C5	C4	C3	H4	180.0	180.0
C3	C4	C5	C8	0.2	0.0
C3	C4	C5	H5	180.2	180.0
O2	C3	C6	C4	183.4	180.3
C6	C3	C4	C5	359.5	0.2
C6	C3	C4	H4	179.5	180.3
C7	C6	C3	H6	180.0	179.5
C3	C6	C7	C8	0.3	0.5
C3	C6	C7	H7	180.3	180.3
C5	C4	C3	C6	359.5	0.2
C3	C4	C5	H4	180.0	180.0
C8	C5	C4	H5	180.0	180.1
C4	C5	C8	C7	0.4	360.0
C4	C5	C8	O8	186.6	180.0
H4	C4	C3	C6	179.5	180.3
C3	C4	H4	C5	180.0	180.0
H4	C4	C5	C8	180.2	180.0
H4	C4	C5	H5	0.2	359.9
C8	C5	C4	H4	180.2	180.0
C4	C5	C8	H5	180.0	179.9
C6	C7	C8	C5	359.4	359.7
C5	C8	C7	H7	179.4	180.0
C7	C8	C5	O8	173.8	180.0
C5	C8	O8	C9	275.1	274.8
H5	C5	C4	H4	0.2	359.9
C4	C5	H5	C8	180.0	180.1
H5	C5	C8	C7	180.4	180.0
H5	C5	C8	O8	6.6	0.0
C3	C6	C7	H6	180.0	180.5
C5	C8	C7	C6	359.4	359.7
C8	C7	C6	H7	180.0	180.3
C6	C7	C8	O8	173.3	179.7
C3	C6	H6	C7	180.0	179.5
H6	C6	C7	C8	180.3	180.0
H6	C6	C7	H7	0.3	359.7
C7	C8	C5	H5	180.4	180.0
C5	C8	C7	O8	186.1	180.0
C8	C7	C6	H6	180.3	180.0
C6	C7	C8	H7	180.0	179.7
C7	C8	O8	C9	101.2	94.8
H7	C7	C6	H6	0.3	359.7
C6	C7	H7	C8	180.0	180.3
H7	C7	C8	O8	353.3	0.0
O8	C8	C5	H5	6.6	0.0
C5	C8	O8	C7	173.8	180.0
O8	C8	C7	H7	353.3	0.0
C8	O8	C9	C10	336.7	354.4
C8	O8	C9	C14	158.7	174.0
C10	C9	O8	C14	178.0	180.3
O8	C9	C10	C11	182.4	180.0
O8	C9	C10	H10	2.4	359.9
O8	C9	C14	C13	177.6	179.7
O8	C9	C14	CL14	359.1	0.3
O8	C9	C10	C14	182.0	179.7
C10	C9	C14	C13	359.5	359.4
C10	C9	C14	CL14	181.0	179.9
C11	C10	C9	H10	180.0	180.1
C9	C10	C11	C12	0.0	360.0
C9	C10	C11	H11	180.0	180.0
O8	C9	C14	C10	178.1	180.3
C14	C9	C10	C11	0.5	0.4
C14	C9	C10	H10	180.4	180.2
C12	C13	C14	C9	0.0	0.5
C9	C14	C13	H13	180.0	180.3
C13	C14	C9	CL14	178.5	179.5
C11	C10	C9	C14	0.5	0.4
C9	C10	C11	H10	180.0	179.9
C12	C11	C10	H11	180.0	180.0
C10	C11	C12	CL12	177.2	180.0
C10	C11	C12	C13	359.5	360.0
H10	C10	C9	C14	180.4	180.2
C9	C10	H10	C11	180.0	180.1
H10	C10	C11	C12	180.0	180.1
H10	C10	C11	H11	0.1	0.1
C12	C11	C10	H10	180.0	180.1
C10	C11	C12	H11	180.0	180.0
CL12	C12	C11	C13	177.7	180.1
C11	C12	C13	C14	0.5	359.8
C11	C12	C13	H13	180.5	180.0
H11	C11	C10	H10	0.1	0.1
C10	C11	H11	C12	180.0	180.0
H11	C11	C12	CL12	357.2	0.0
H11	C11	C12	C13	179.5	180.0
CL12	C12	C11	H11	357.2	0.0
C11	C12	CL12	C13	182.3	179.9
CL12	C12	C13	C14	182.7	179.7
CL12	C12	C13	H13	2.7	360.0
C9	C14	C13	C12	0.0	0.5
C13	C12	C11	H11	179.5	180.0
C11	C12	C13	CL12	177.7	180.1
C14	C13	C12	H13	180.0	179.8
C12	C13	C14	CL14	178.6	180.0
C9	C14	C13	CL14	181.5	180.5
C12	C13	C14	H13	180.0	180.2
C12	C13	H13	C14	180.0	179.8
H13	C13	C14	CL14	358.6	359.8
C9	C14	CL14	C13	178.5	179.5
CL14	C14	C13	H13	358.6	359.8