PDB Chemical Component D0M

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for D0M

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
N1	C1	1.435	1.469
N1	H1	1.000	1.009
C1	C2	1.521	1.530
C1	C4	1.516	1.530
C1	H2	1.100	1.090
C2	C3	1.555	1.531
C2	H3	1.100	1.090
C2	H4	1.100	1.090
C3	H5	1.100	1.090
C3	H6	1.100	1.090
C3	H7	1.100	1.091
C4	C5	1.554	1.530
C4	H8	1.100	1.091
C4	H9	1.100	1.090
C5	H10	1.100	1.091
C5	H11	1.100	1.090
C5	H12	1.100	1.089
N1	H13	1.000	1.009

Bond Angles for D0M

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C1	N1	H1	109.5	111.0
N1	C1	C2	109.4	109.5
N1	C1	C4	109.8	109.5
N1	C1	H2	108.4	109.5
C1	N1	H13	109.4	111.0
H1	N1	H13	109.4	111.0
C2	C1	C4	106.4	109.5
C2	C1	H2	111.7	109.5
C1	C2	C3	114.9	109.5
C1	C2	H3	107.7	109.5
C1	C2	H4	107.7	109.4
C4	C1	H2	111.2	109.5
C1	C4	C5	116.4	109.5
C1	C4	H8	107.2	109.5
C1	C4	H9	107.2	109.5
C3	C2	H3	107.7	109.5
C3	C2	H4	107.7	109.4
C2	C3	H5	109.5	109.5
C2	C3	H6	109.4	109.4
C2	C3	H7	109.5	109.5
H3	C2	H4	111.2	109.5
H5	C3	H6	109.5	109.5
H5	C3	H7	109.4	109.5
H6	C3	H7	109.5	109.5
C5	C4	H8	107.2	109.4
C5	C4	H9	107.3	109.4
C4	C5	H10	109.5	109.4
C4	C5	H11	109.5	109.4
C4	C5	H12	109.5	109.5
H8	C4	H9	111.6	109.4
H10	C5	H11	109.4	109.4
H10	C5	H12	109.5	109.5
H11	C5	H12	109.5	109.5

Torsion Angles for D0M

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
H1	N1	C1	H13	240.1	236.1
C2	C1	N1	C4	243.6	240.0
C2	C1	N1	H2	121.9	120.0
N1	C1	C2	C3	317.8	295.0
N1	C1	C2	H3	77.7	55.0
N1	C1	C2	H4	197.8	175.0
C4	C1	N1	H2	238.4	240.0
N1	C1	C4	C5	63.0	65.0
N1	C1	C4	H8	182.9	185.0
N1	C1	C4	H9	303.0	305.0
H1	N1	C1	C2	180.0	300.0
H1	N1	C1	C4	296.5	60.0
H1	N1	C1	H2	58.1	180.0
C1	N1	H1	H13	120.0	123.9
C2	C1	N1	H1	180.0	300.0
N1	C1	C2	C4	118.6	120.0
N1	C1	C2	H2	240.1	240.0
C2	C1	N1	H13	300.0	64.0
C4	C1	C2	H2	121.5	120.0
C2	C1	C4	C5	181.2	185.0
C2	C1	C4	H8	301.2	305.0
C2	C1	C4	H9	61.2	65.0
C3	C2	C1	H3	240.0	240.0
C3	C2	C1	H4	120.0	119.9
C1	C2	C3	H5	180.0	300.0
C1	C2	C3	H6	300.0	60.0
C1	C2	C3	H7	60.0	180.0
H3	C2	C1	H4	240.0	240.0
C4	C1	N1	H1	296.5	60.0
N1	C1	C4	C2	241.7	240.0
N1	C1	C4	H2	119.9	120.0
C4	C1	N1	H13	56.4	183.9
C2	C1	C4	H2	238.2	240.0
C4	C1	C2	C3	199.2	175.0
C4	C1	C2	H3	319.2	295.0
C4	C1	C2	H4	79.2	55.1
C5	C4	C1	H8	240.0	240.0
C5	C4	C1	H9	120.0	120.0
C1	C4	C5	H10	180.0	300.0
C1	C4	C5	H11	300.0	60.0
C1	C4	C5	H12	60.0	180.0
H8	C4	C1	H9	240.0	240.0
H2	C1	N1	H1	58.1	180.0
N1	C1	H2	C2	120.5	120.0
N1	C1	H2	C4	239.2	240.0
H2	C1	N1	H13	178.0	303.9
C2	C1	H2	C4	118.7	120.0
H2	C1	C2	C3	77.7	55.0
H2	C1	C2	H3	197.7	175.0
H2	C1	C2	H4	317.7	295.0
H2	C1	C4	C5	303.1	305.0
H2	C1	C4	H8	63.0	65.0
H2	C1	C4	H9	183.0	185.0
C3	C2	C1	C4	199.2	175.0
C3	C2	C1	H2	77.7	55.0
C1	C2	C3	H3	120.0	120.1
C1	C2	C3	H4	240.0	240.1
H3	C2	C3	H4	120.0	120.0
H5	C3	C2	H6	240.0	240.0
H5	C3	C2	H7	120.0	120.0
H6	C3	C2	H7	240.0	240.0
H3	C2	C1	C4	319.2	295.0
H3	C2	C1	H2	197.7	175.0
C1	C2	H3	C3	235.6	239.9
C1	C2	H3	H4	117.8	120.0
C3	C2	H3	H4	242.2	240.1
H3	C2	C3	H5	60.0	179.9
H3	C2	C3	H6	180.0	299.9
H3	C2	C3	H7	300.0	59.9
H4	C2	C1	C4	79.2	55.1
H4	C2	C1	H2	317.7	295.0
C1	C2	H4	C3	124.4	119.9
C1	C2	H4	H3	242.2	239.9
C3	C2	H4	H3	117.8	120.0
H4	C2	C3	H5	300.0	59.9
H4	C2	C3	H6	60.0	180.0
H4	C2	C3	H7	180.0	299.9
H5	C3	C2	H3	60.0	179.9
H5	C3	C2	H4	300.0	59.9
C2	C3	H5	H6	120.0	120.0
C2	C3	H5	H7	240.0	240.0
H6	C3	H5	H7	120.0	120.0
H6	C3	C2	H3	180.0	299.9
H6	C3	C2	H4	60.0	180.0
C2	C3	H6	H5	240.0	240.0
C2	C3	H6	H7	120.0	120.0
H5	C3	H6	H7	240.0	240.0
H7	C3	C2	H3	300.0	59.9
H7	C3	C2	H4	180.0	299.9
C2	C3	H7	H5	120.0	120.0
C2	C3	H7	H6	240.0	240.0
H5	C3	H7	H6	120.0	120.0
C5	C4	C1	H2	303.1	305.0
C1	C4	C5	H8	120.0	120.0
C1	C4	C5	H9	240.0	240.0
H8	C4	C5	H9	120.0	119.9
H10	C5	C4	H11	240.0	240.1
H10	C5	C4	H12	120.0	120.0
H11	C5	C4	H12	240.0	240.0
H8	C4	C1	H2	63.0	65.0
C1	C4	H8	C5	234.4	240.0
C1	C4	H8	H9	117.2	120.0
C5	C4	H8	H9	242.8	240.1
H8	C4	C5	H10	60.0	180.0
H8	C4	C5	H11	180.0	299.9
H8	C4	C5	H12	300.0	60.0
H9	C4	C1	H2	183.0	185.0
C1	C4	H9	C5	125.7	120.0
C1	C4	H9	H8	242.8	240.0
C5	C4	H9	H8	117.2	119.9
H9	C4	C5	H10	300.0	60.1
H9	C4	C5	H11	60.0	180.0
H9	C4	C5	H12	180.0	300.0
H10	C5	C4	H8	60.0	180.0
H10	C5	C4	H9	300.0	60.1
C4	C5	H10	H11	120.0	119.9
C4	C5	H10	H12	240.0	239.9
H11	C5	H10	H12	120.0	120.0
H11	C5	C4	H8	180.0	299.9
H11	C5	C4	H9	60.0	180.0
C4	C5	H11	H10	240.0	240.1
C4	C5	H11	H12	120.0	120.1
H10	C5	H11	H12	240.0	240.0
H12	C5	C4	H8	300.0	60.0
H12	C5	C4	H9	180.0	300.0
C4	C5	H12	H10	120.0	120.0
C4	C5	H12	H11	240.0	240.0
H10	C5	H12	H11	120.0	120.0
C1	N1	H13	H1	240.0	236.1
H13	N1	C1	C2	300.0	64.0
H13	N1	C1	C4	56.4	183.9
H13	N1	C1	H2	178.0	303.9