PDB Chemical Component D0A
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for D0A
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
N15 |
C14 |
1.335 |
1.318 |
N15 |
C16 |
1.336 |
1.320 |
C14 |
C13 |
1.385 |
1.381 |
C16 |
C17 |
1.391 |
1.381 |
C13 |
C12 |
1.398 |
1.393 |
C17 |
C12 |
1.390 |
1.397 |
C17 |
F18 |
1.359 |
1.351 |
C20 |
C21 |
1.378 |
1.386 |
C20 |
C19 |
1.383 |
1.385 |
C21 |
C22 |
1.386 |
1.384 |
C12 |
N10 |
1.401 |
1.394 |
C19 |
C11 |
1.394 |
1.392 |
F27 |
C24 |
1.348 |
1.398 |
C22 |
C24 |
1.505 |
1.508 |
C22 |
N23 |
1.344 |
1.316 |
F26 |
C24 |
1.311 |
1.399 |
N10 |
C6 |
1.363 |
1.386 |
C24 |
F25 |
1.342 |
1.399 |
C11 |
N23 |
1.350 |
1.328 |
C11 |
C4 |
1.489 |
1.484 |
N5 |
C6 |
1.331 |
1.328 |
N5 |
C4 |
1.341 |
1.329 |
C6 |
C1 |
1.425 |
1.404 |
C4 |
N3 |
1.346 |
1.323 |
C1 |
C2 |
1.444 |
1.409 |
C1 |
C7 |
1.438 |
1.461 |
N3 |
C2 |
1.348 |
1.330 |
C2 |
N9 |
1.364 |
1.368 |
C7 |
C8 |
1.359 |
1.344 |
N9 |
C8 |
1.374 |
1.371 |
C13 |
H32 |
1.081 |
1.080 |
C16 |
H34 |
1.080 |
1.080 |
C19 |
H35 |
1.080 |
1.081 |
C20 |
H36 |
1.080 |
1.080 |
C21 |
H37 |
1.080 |
1.080 |
C7 |
H28 |
1.079 |
1.080 |
C8 |
H29 |
1.080 |
1.080 |
N9 |
H30 |
1.000 |
0.970 |
N10 |
H31 |
1.001 |
0.970 |
C14 |
H33 |
1.080 |
1.080 |
Bond Angles for D0A
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
N15 |
C14 |
H33 |
118.1 |
119.6 |
N15 |
C16 |
H34 |
118.4 |
119.6 |
C14 |
C13 |
H32 |
120.6 |
120.4 |
C16 |
C17 |
C12 |
119.2 |
119.0 |
C16 |
C17 |
F18 |
122.9 |
120.5 |
C13 |
C12 |
C17 |
117.7 |
118.3 |
C13 |
C12 |
N10 |
123.0 |
120.9 |
C12 |
C13 |
H32 |
120.6 |
120.5 |
C12 |
C17 |
F18 |
117.7 |
120.5 |
C17 |
C12 |
N10 |
119.2 |
120.9 |
C20 |
C21 |
C22 |
118.7 |
119.3 |
C21 |
C20 |
H36 |
120.3 |
120.7 |
C20 |
C21 |
H37 |
120.7 |
120.3 |
C20 |
C19 |
C11 |
118.9 |
119.1 |
C20 |
C19 |
H35 |
120.5 |
120.5 |
C21 |
C22 |
C24 |
122.4 |
119.5 |
C21 |
C22 |
N23 |
122.6 |
120.9 |
C22 |
C21 |
H37 |
120.7 |
120.3 |
C12 |
N10 |
C6 |
127.3 |
120.0 |
C12 |
N10 |
H31 |
116.4 |
120.0 |
C19 |
C11 |
N23 |
121.8 |
120.5 |
C19 |
C11 |
C4 |
118.9 |
119.8 |
C11 |
C19 |
H35 |
120.5 |
120.4 |
C24 |
C22 |
N23 |
114.7 |
119.5 |
C22 |
C24 |
F25 |
112.7 |
109.5 |
C22 |
N23 |
C11 |
118.4 |
121.6 |
C4 |
C11 |
N23 |
119.3 |
119.7 |
C11 |
C4 |
N3 |
118.5 |
118.7 |
C6 |
C1 |
C7 |
139.7 |
135.0 |
C2 |
C1 |
C7 |
107.1 |
106.2 |
C1 |
C2 |
N9 |
105.8 |
107.2 |
C1 |
C7 |
C8 |
106.4 |
106.8 |
C1 |
C7 |
H28 |
126.8 |
126.6 |
N3 |
C2 |
N9 |
129.6 |
134.3 |
C2 |
N9 |
C8 |
110.5 |
110.0 |
C2 |
N9 |
H30 |
124.8 |
125.0 |
C8 |
C7 |
H28 |
126.8 |
126.6 |
C7 |
C8 |
H29 |
124.9 |
125.1 |
N9 |
C8 |
H29 |
124.9 |
125.1 |
Torsion Angles for D0A
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C14 |
N15 |
C16 |
H34 |
178.4 |
180.2 |
N15 |
C14 |
C13 |
H32 |
180.8 |
180.3 |
N15 |
C16 |
C17 |
F18 |
187.5 |
179.9 |
C12 |
C13 |
C14 |
H32 |
180.0 |
179.7 |
C13 |
C12 |
C17 |
C16 |
358.8 |
359.4 |
C12 |
C17 |
C16 |
F18 |
174.7 |
180.7 |
C16 |
C17 |
C12 |
N10 |
182.6 |
179.5 |
C14 |
C13 |
C12 |
H32 |
180.0 |
180.3 |
C16 |
C17 |
C12 |
C13 |
358.8 |
359.4 |
C13 |
C12 |
C17 |
F18 |
173.7 |
180.1 |
C17 |
C12 |
C13 |
N10 |
184.0 |
180.1 |
C13 |
C12 |
N10 |
C6 |
13.7 |
17.1 |
C13 |
C12 |
N10 |
H31 |
193.7 |
197.2 |
C16 |
C17 |
C12 |
F18 |
185.0 |
179.3 |
C13 |
C12 |
C17 |
N10 |
176.2 |
179.9 |
C17 |
C12 |
C13 |
H32 |
179.8 |
180.0 |
C17 |
C12 |
N10 |
C6 |
189.7 |
197.1 |
C17 |
C12 |
N10 |
H31 |
9.7 |
17.1 |
C16 |
C17 |
F18 |
C12 |
174.8 |
180.7 |
F18 |
C17 |
C12 |
N10 |
357.6 |
0.1 |
C21 |
C20 |
C19 |
C11 |
0.2 |
0.0 |
C21 |
C20 |
C19 |
H35 |
180.1 |
179.7 |
C20 |
C21 |
C22 |
C24 |
172.7 |
180.0 |
C20 |
C21 |
C22 |
N23 |
358.7 |
0.0 |
C22 |
C21 |
C20 |
H37 |
180.0 |
179.9 |
C20 |
C19 |
C11 |
N23 |
0.3 |
360.0 |
C20 |
C19 |
C11 |
C4 |
182.6 |
179.8 |
C11 |
C19 |
C20 |
H35 |
180.0 |
180.3 |
C22 |
C21 |
C20 |
H36 |
180.3 |
179.9 |
C20 |
C21 |
C22 |
H37 |
180.0 |
180.1 |
C24 |
C22 |
C21 |
N23 |
174.0 |
180.0 |
C21 |
C22 |
C24 |
F25 |
128.7 |
90.1 |
C21 |
C22 |
N23 |
C11 |
1.8 |
359.9 |
C13 |
C12 |
N10 |
C17 |
184.1 |
180.1 |
N10 |
C12 |
C13 |
H32 |
355.8 |
360.0 |
N10 |
C12 |
C17 |
F18 |
357.6 |
0.1 |
C20 |
C19 |
C11 |
H35 |
180.0 |
179.7 |
C22 |
N23 |
C11 |
C19 |
358.8 |
0.1 |
C4 |
C11 |
C19 |
N23 |
182.3 |
179.8 |
C19 |
C11 |
C4 |
N3 |
203.9 |
360.0 |
C21 |
C22 |
C24 |
N23 |
185.6 |
180.0 |
C24 |
C22 |
C21 |
H37 |
352.7 |
360.0 |
C24 |
C22 |
N23 |
C11 |
187.3 |
180.0 |
C21 |
C22 |
N23 |
C24 |
174.4 |
180.0 |
N23 |
C22 |
C21 |
H37 |
178.6 |
180.0 |
C19 |
C11 |
N23 |
C22 |
358.8 |
0.1 |
N23 |
C22 |
C24 |
F25 |
303.2 |
270.0 |
C4 |
C11 |
N23 |
C22 |
176.5 |
180.2 |
C12 |
N10 |
C6 |
H31 |
180.0 |
180.0 |
F25 |
C24 |
C22 |
N23 |
303.2 |
270.0 |
C19 |
C11 |
N23 |
C4 |
182.3 |
179.8 |
N23 |
C11 |
C19 |
H35 |
180.3 |
180.2 |
N23 |
C11 |
C4 |
N3 |
26.1 |
179.8 |
C19 |
C11 |
C4 |
N23 |
177.8 |
180.2 |
C4 |
C11 |
C19 |
H35 |
2.6 |
0.1 |
C22 |
N23 |
C11 |
C4 |
176.5 |
180.2 |
C12 |
N10 |
C6 |
N5 |
27.7 |
6.6 |
N5 |
C6 |
C1 |
C7 |
180.9 |
179.8 |
N5 |
C4 |
C11 |
N23 |
208.7 |
359.9 |
C12 |
N10 |
C6 |
C1 |
209.1 |
186.2 |
C2 |
C1 |
C6 |
C7 |
180.5 |
179.7 |
C6 |
C1 |
C2 |
N9 |
177.4 |
180.2 |
C6 |
C1 |
C7 |
C8 |
182.0 |
179.8 |
C6 |
C1 |
C7 |
H28 |
2.0 |
359.7 |
N3 |
C4 |
C11 |
N23 |
26.1 |
179.8 |
C4 |
N3 |
C2 |
N9 |
180.8 |
180.0 |
C6 |
C1 |
C2 |
C7 |
179.7 |
180.2 |
C2 |
C1 |
C7 |
C8 |
1.5 |
0.0 |
C2 |
C1 |
C7 |
H28 |
181.5 |
180.0 |
N3 |
C2 |
C1 |
N9 |
178.5 |
180.0 |
C1 |
C2 |
N9 |
C8 |
2.2 |
360.0 |
C1 |
C2 |
N9 |
H30 |
182.2 |
179.9 |
C7 |
C1 |
C2 |
N9 |
357.7 |
0.0 |
C8 |
C7 |
C1 |
H28 |
180.0 |
180.0 |
C1 |
C7 |
C8 |
H29 |
179.8 |
180.1 |
C11 |
C4 |
N3 |
C2 |
184.6 |
180.0 |
N3 |
C2 |
C1 |
C7 |
176.2 |
180.0 |
C1 |
C2 |
N3 |
N9 |
181.9 |
180.0 |
N3 |
C2 |
N9 |
C8 |
183.8 |
179.9 |
N3 |
C2 |
N9 |
H30 |
3.8 |
359.9 |
N9 |
C2 |
C1 |
C7 |
357.7 |
0.0 |
C2 |
N9 |
C8 |
H29 |
178.7 |
179.9 |
C1 |
C7 |
C8 |
H28 |
180.0 |
180.0 |
C2 |
N9 |
C8 |
C7 |
358.7 |
0.0 |
N9 |
C8 |
C7 |
H29 |
180.0 |
179.9 |
C2 |
N9 |
C8 |
H30 |
180.0 |
179.9 |
N9 |
C8 |
C7 |
H28 |
179.8 |
180.0 |
C7 |
C8 |
N9 |
H29 |
180.0 |
180.1 |
H32 |
C13 |
C12 |
C17 |
179.8 |
180.0 |
H32 |
C13 |
C12 |
N10 |
355.8 |
360.0 |
H34 |
C16 |
C17 |
C12 |
182.2 |
180.1 |
H34 |
C16 |
C17 |
F18 |
7.6 |
359.4 |
C20 |
C19 |
H35 |
C11 |
180.0 |
180.3 |
H35 |
C19 |
C11 |
N23 |
180.3 |
180.2 |
H35 |
C19 |
C11 |
C4 |
2.6 |
0.1 |
H36 |
C20 |
C21 |
C22 |
180.3 |
179.9 |
H36 |
C20 |
C21 |
H37 |
0.3 |
360.0 |
H36 |
C20 |
C19 |
C11 |
180.2 |
180.1 |
H36 |
C20 |
C19 |
H35 |
0.1 |
359.8 |
C20 |
C21 |
H37 |
C22 |
180.0 |
179.9 |
H37 |
C21 |
C20 |
H36 |
0.3 |
360.0 |
H37 |
C21 |
C22 |
C24 |
352.7 |
360.0 |
H37 |
C21 |
C22 |
N23 |
178.6 |
180.0 |
C1 |
C7 |
H28 |
C8 |
180.0 |
180.0 |
H28 |
C7 |
C8 |
H29 |
359.8 |
0.1 |
H29 |
C8 |
C7 |
H28 |
359.8 |
0.1 |
C2 |
N9 |
H30 |
C8 |
180.0 |
180.1 |
H30 |
N9 |
C8 |
H29 |
358.7 |
0.0 |
C12 |
N10 |
H31 |
C6 |
180.0 |
180.0 |
H33 |
C14 |
C13 |
H32 |
0.8 |
0.3 |