PDB Chemical Component CYH

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for CYH

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 O1 1.370 1.207
C1 C2 1.538 1.512
C1 C6 1.545 1.513
C2 C3 1.544 1.532
C2 H21 1.115 1.090
C2 H22 1.115 1.089
C3 C4 1.531 1.528
C3 H31 1.115 1.090
C3 H32 1.115 1.090
C4 C5 1.529 1.529
C4 H41 1.115 1.090
C4 H42 1.115 1.090
C5 C6 1.545 1.527
C5 H51 1.115 1.089
C5 H52 1.115 1.090
C6 H61 1.115 1.090
C6 H62 1.115 1.089

Bond Angles for CYH

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O1 C1 C2 115.5 120.8
O1 C1 C6 118.4 120.9
C2 C1 C6 118.5 118.3
C1 C2 C3 110.3 108.5
C1 C2 H21 111.9 109.6
C1 C2 H22 111.9 109.6
C1 C6 C5 105.9 108.8
C1 C6 H61 113.5 109.7
C1 C6 H62 113.6 109.3
C3 C2 H21 111.9 109.6
C3 C2 H22 111.9 109.7
C2 C3 C4 111.4 109.4
C2 C3 H31 111.5 109.4
C2 C3 H32 111.5 109.4
H21 C2 H22 98.5 109.8
C4 C3 H31 111.5 109.5
C4 C3 H32 111.5 109.5
C3 C4 C5 111.4 109.8
C3 C4 H41 111.5 109.4
C3 C4 H42 111.5 109.4
H31 C3 H32 98.9 109.5
C5 C4 H41 111.5 109.4
C5 C4 H42 111.5 109.4
C4 C5 C6 108.5 109.5
C4 C5 H51 112.6 109.5
C4 C5 H52 112.5 109.5
H41 C4 H42 98.9 109.3
C6 C5 H51 112.6 109.5
C6 C5 H52 112.5 109.3
C5 C6 H61 113.5 109.6
C5 C6 H62 113.5 109.7
H51 C5 H52 97.9 109.5
H61 C6 H62 96.9 109.7

Torsion Angles for CYH

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C2 C1 O1 C6 149.3 180.3
O1 C1 C2 C3 164.0 128.7
O1 C1 C2 H21 38.8 248.3
O1 C1 C2 H22 289.3 8.9
O1 C1 C6 C5 202.1 231.3
O1 C1 C6 H61 76.8 351.2
O1 C1 C6 H62 327.3 111.6
O1 C1 C2 C6 210.8 179.7
C2 C1 C6 C5 53.7 51.0
C2 C1 C6 H61 288.5 170.9
C2 C1 C6 H62 179.0 291.3
C3 C2 C1 H21 125.2 240.4
C3 C2 C1 H22 234.7 119.8
C1 C2 C3 C4 45.7 54.6
C1 C2 C3 H31 280.4 174.6
C1 C2 C3 H32 171.0 294.6
H21 C2 C1 H22 109.5 239.4
O1 C1 C6 C2 148.4 180.3
C6 C1 C2 C3 313.3 309.0
C6 C1 C2 H21 188.0 68.6
C6 C1 C2 H22 78.5 189.2
C4 C5 C6 C1 299.8 305.6
C1 C6 C5 H51 65.0 185.6
C1 C6 C5 H52 174.5 65.6
C5 C6 C1 H61 125.2 240.1
C5 C6 C1 H62 234.8 119.7
H61 C6 C1 H62 109.5 239.6
C3 C2 C1 C6 313.3 309.0
C1 C2 C3 H21 234.7 119.6
C1 C2 C3 H22 125.3 240.3
H21 C2 C3 H22 250.5 120.6
C4 C3 C2 H31 125.3 239.9
C4 C3 C2 H32 234.7 120.0
C2 C3 C4 C5 302.0 296.4
C2 C3 C4 H41 176.7 56.5
C2 C3 C4 H42 67.3 176.3
H31 C3 C2 H32 109.4 240.0
H21 C2 C1 C6 188.0 68.6
C1 C2 H21 C3 124.4 241.0
C1 C2 H21 H22 242.2 120.5
C3 C2 H21 H22 117.8 239.5
H21 C2 C3 C4 170.9 294.9
H21 C2 C3 H31 45.7 55.0
H21 C2 C3 H32 296.2 175.0
H22 C2 C1 C6 78.5 189.2
C1 C2 H22 C3 235.6 119.1
C1 C2 H22 H21 117.8 239.5
C3 C2 H22 H21 242.2 120.5
H22 C2 C3 C4 280.4 174.3
H22 C2 C3 H31 155.1 294.4
H22 C2 C3 H32 45.7 54.4
C4 C3 C2 H21 170.9 294.9
C4 C3 C2 H22 280.4 174.3
C2 C3 C4 H31 234.7 120.0
C2 C3 C4 H32 125.3 240.1
H31 C3 C4 H32 250.5 120.1
C5 C4 C3 H41 125.3 239.9
C5 C4 C3 H42 234.7 120.2
C3 C4 C5 C6 66.4 63.4
C3 C4 C5 H51 301.1 183.5
C3 C4 C5 H52 191.6 303.6
H41 C4 C3 H42 109.4 240.3
H31 C3 C2 H21 45.7 55.0
H31 C3 C2 H22 155.1 294.4
C2 C3 H31 C4 125.2 240.0
C2 C3 H31 H32 242.6 119.9
C4 C3 H31 H32 117.4 239.9
H31 C3 C4 C5 67.2 176.4
H31 C3 C4 H41 302.0 296.5
H31 C3 C4 H42 192.5 56.3
H32 C3 C2 H21 296.2 175.0
H32 C3 C2 H22 45.7 54.4
C2 C3 H32 C4 234.7 119.9
C2 C3 H32 H31 117.4 240.0
C4 C3 H32 H31 242.6 120.1
H32 C3 C4 C5 176.7 56.4
H32 C3 C4 H41 51.4 176.4
H32 C3 C4 H42 302.0 296.2
C1 C6 C5 C4 299.8 305.6
C5 C4 C3 H31 67.2 176.4
C5 C4 C3 H32 176.7 56.4
C3 C4 C5 H41 234.7 120.1
C3 C4 C5 H42 125.3 239.8
H41 C4 C5 H42 250.5 119.7
C6 C5 C4 H51 125.3 239.9
C6 C5 C4 H52 234.8 119.8
C4 C5 C6 H61 65.0 185.7
C4 C5 C6 H62 174.5 65.1
H51 C5 C4 H52 109.5 239.9
H41 C4 C3 H31 302.0 296.5
H41 C4 C3 H32 51.4 176.4
C3 C4 H41 C5 125.2 239.6
C3 C4 H41 H42 242.6 119.8
C5 C4 H41 H42 117.4 240.2
H41 C4 C5 C6 191.6 303.3
H41 C4 C5 H51 66.4 63.4
H41 C4 C5 H52 316.9 183.5
H42 C4 C3 H31 192.5 56.3
H42 C4 C3 H32 302.0 296.2
C3 C4 H42 C5 234.8 120.4
C3 C4 H42 H41 117.4 240.2
C5 C4 H42 H41 242.6 119.8
H42 C4 C5 C6 301.1 183.6
H42 C4 C5 H51 175.8 303.7
H42 C4 C5 H52 66.3 63.8
C1 C6 C5 H61 234.8 120.0
C1 C6 C5 H62 125.3 240.5
C6 C5 C4 H41 191.6 303.3
C6 C5 C4 H42 301.1 183.6
C4 C5 C6 H51 234.7 120.1
C4 C5 C6 H52 125.2 240.1
H51 C5 C6 H52 250.5 120.0
H61 C6 C5 H62 250.5 120.5
H51 C5 C4 H41 66.4 63.4
H51 C5 C4 H42 175.8 303.7
C4 C5 H51 C6 123.1 239.9
C4 C5 H51 H52 241.5 120.1
C6 C5 H51 H52 118.5 240.1
H51 C5 C6 H61 190.3 65.6
H51 C5 C6 H62 299.8 305.0
H52 C5 C4 H41 316.9 183.5
H52 C5 C4 H42 66.3 63.8
C4 C5 H52 C6 237.0 119.9
C4 C5 H52 H51 118.5 239.9
C6 C5 H52 H51 241.5 120.0
H52 C5 C6 H61 299.8 305.6
H52 C5 C6 H62 49.3 185.0
C1 C6 H61 C5 121.0 240.6
C1 C6 H61 H62 240.5 120.1
H61 C6 C5 H51 190.3 65.6
H61 C6 C5 H52 299.8 305.6
C5 C6 H61 H62 119.4 239.5
C1 C6 H62 C5 238.9 119.2
C1 C6 H62 H61 119.5 239.7
H62 C6 C5 H51 299.8 305.0
H62 C6 C5 H52 49.3 185.0
C5 C6 H62 H61 240.5 120.5